Austrofundulus limnaeus (annual killifish): 106522553
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Entry
106522553 CDS
T06063
Symbol
mex3d
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106522553 (mex3d)
04121 Ubiquitin system [BR:
alim04121
]
106522553 (mex3d)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106522553 (mex3d)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106522553 (mex3d)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106522553 (mex3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_BICC1_1st
zf-C3HC4
KH_2
RING_XB3-XBAT31
KH_DEAH11_2nd
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
106522553
NCBI-ProteinID:
XP_013871050
UniProt:
A0A2I4BTH2
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MPSPLFHPEIIDHDVMISSQHGGVALPRETDQESRDEDHQEALRFALDQLSLMAMEKVDC
VDGSRGGVGLVDTLDGTQGPGSESCNGVGGGGFVDLQMLDHPGGSRDSPSSCSPSPEYYG
SGGYHMAGSHSMLHGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKT
NTYIKTPVRGEDPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGGPGGGGSLPGP
PHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENV
DRAREEIETHITLRTGTFVDLQGDNDFHTNGTDVSLEGLSSLSGGLGASLWSRATSHHSA
PPPSPPPSLPMSMHHSSSRKMSSSVAYHTHNGGMSSDNFSAARKANEGGSPTSPFSTGSS
SAGGGFTFGGDSTPGLPPSEELGFEFSASNIWAPFVNGGAGSKAAGSSQQQPLRRNSSGL
SGGAITPRLSPTLPQDTGASPLDHPLARRAQSDPLSTLSWLQSSSTGGGSFSGASSSSSG
GSSTGYSSCSASSLPGGSPTDSEGGGGAGLSAGMLSRLKSSSGVAGLVGIGPGVNRDCFV
CFESEVTAALVPCGHNLFCMECAGQICQSAEPECPVCHTPTTQCIRIFS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcctagccctttattccatcccgagattatagaccacgacgtgatgatcagcagccag
cacggcggcgtggctctgccccgggagacggaccaggagtcccgggatgaggaccaccaa
gaggcgctccgcttcgccctggaccagctgtcactgatggccatggaaaaggtggactgc
gtggacggtagccgaggaggcgtcgggcttgtggacactctggacgggacccagggtccg
ggctctgagagctgcaacggtgtgggtggagggggtttcgtggacctccagatgctggac
caccccggcgggtcgcgggactcgccgtcgtcctgctccccgtccccggaatactacggc
tcgggcgggtaccacatggccgggtcgcactccatgctccacggggaacaaagctcggtc
ctctgcaacaggaaaagaagcgtcaacatgacggagtgtgtgcccgtcccgagctccgag
cacgttgctgagatagtggggagacaaggttgtaagatcaaggctctgcgtgcgaaaaca
aacacctacatcaagactccagtcagaggggaggacccagtgtttattgttaccggacga
agggaggatgttgaaatggccaaacgtgaaatcgtatctgcagccgagcatttctccatg
atccgggcatcccgctgcaaagccggaggtcctggaggaggaggctccctacccggacca
cctcacctgcccggacagaccaccattcaggtcagagtgccctacagagtcgtgggtttg
gttgtcggaccaaagggagcaaccatcaagcgcatccagcagcagactcatacctacatc
gtgaccccgagccgagagaaagatccggtgttcgaggtgaccgggatgccggagaacgtg
gaccgagcgagagaggagatcgagacccacatcaccctgcgaactgggacctttgtggac
ctgcagggagacaatgacttccacaccaatggcacggatgtcagtctagaaggcctcagc
tcgttgagcggagggctgggagcgtctctctggtccagagctacgagccaccactctgcc
cccccgccgtcccctcccccgtctctccccatgtccatgcaccactcctccagccgcaag
atgtcctcgtccgtcgcctatcacacgcacaacggcgggatgagctcagacaacttcagc
gccgcccgaaaggccaacgagggaggcagccccaccagtcccttcagcacgggctccagc
agcgccggaggtggattcacgttcgggggcgactccaccccagggctgcccccctcagag
gagctgggcttcgagttcagcgcctccaacatctgggcgccctttgtcaacggcggagcg
gggagcaaggcggccggctcctcgcagcagcagcctctacgtcgcaacagcagcgggctg
agcggcggcgccatcactccacgcctgtctccgactttgcctcaggacacgggggcgagc
cctctggaccacccgctggctcgacgcgcccagagcgaccccctcagcacgctctcctgg
ctgcagtccagcagcacgggaggcggctccttctcgggagcctccagctccagctccggc
ggctcgtccaccggctactcctcctgctcggcgtcctccctgcccggcggctcgcccacc
gactccgagggcggcggcggcgcgggcctcagcgccgggatgctgagccgtctgaaaagc
agctccggagtggcggggctggtcggcatcggcccgggagtcaacagggactgctttgtg
tgcttcgagagcgaggtgacggccgctctggttccttgcggccacaacctgttctgcatg
gagtgcgccgggcagatctgccagtcggccgagcccgaatgccccgtctgtcacactcca
accacacagtgcatccgcatcttctcctaa
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