Austrofundulus limnaeus (annual killifish): 106522574
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Entry
106522574 CDS
T06063
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106522574 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106522574 (rad54b)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106522574 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
106522574
NCBI-ProteinID:
XP_013871084
UniProt:
A0A2I4BTP1
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MRRSGAPSQLFGNAMKKPRFVPPGASASYFVPEPKPLTPKPVSCNTLNTIQRTLSSPVVN
KSTLNVEAKPSQTAPSVSKALARVLGATESKENESEAKYQNTGSEDRTEDKNAAGENKSP
QWDPESPRTPQPSAGSEGVSGGAQDGVCYFSVVWCKASKKKHKRWEGDAVLVTRGRSVVL
KDMEGKDIGKGSGYKVSELASLSEGETLMIGGKEVEVMGIISAEDFAKGRCFQEVQTDSV
ESNTKPAPPPSHRSASKPFCPPTMVGGAGRPDTKAEKEQVYSPLHNPLAPGALVMPRPSS
NHQWLHNKSGLPVVDVVVDPHLSTHLRPHQREGILFLYECVMGMRAVGRCGAILADEMGL
GKTLQSVALSWMLLKQGPYGGKPVTKRILVVTPGSLVQNWKAEFTKWLGRERINIFTVDQ
DHRIEQFVLSPLHNVLVISYEMLLRCLEQIQKVEFGLIICDEGHRLKNSSIKTSSALSSL
SCSRRVILSGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCTEEERV
LGEERAAELSRLTGMFILRRTQEIINSYLPPRLDWTLFCELSPLQHQLYKHLLSHRVFRA
CLQGYSQTNMHLACITALKKLCNHPGLLHISVKERTDRGSVESSLYEGLTDLFPESYSSA
EFSSEDSGKLMVLSDLLSAIRHLSPSDRVVLVSNYTQTLDLLQDLCVHMGYTFCRLDGHT
PTSQRQRLVDTFNSPYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARV
WRDGQKKTVHIYRLLTAGTLEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTNELQDLFS
LTDTPCLTHDLLNCDCSADGSVSEEAVEEAEHVSHRPCQLGRQGDRKEASQKHLSMSELM
RWRHFSGDTHTFSDPYLDHARSHITFAFQTTISHTTQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctcaggagctcccagtcagctttttggcaatgcaatgaaaaaacctcgattt
gtaccacctggagcatctgcttcatattttgtccctgagccgaagcctctgaccccaaaa
cctgtttcatgcaacacattgaatacgatccagagaactctttcatcaccagttgtgaat
aaatcaactttaaatgtcgaggccaaacccagccagactgctccatctgtttccaaggca
ctggctcgagttcttggagcaacagaaagtaaagaaaatgaatctgaggcaaaatatcaa
aacactggatcagaagatcgcacagaggacaaaaatgcagcaggagaaaataaaagtcct
cagtgggatcctgaatctcctcgaacccctcagccctctgccgggtcagaaggagtctct
ggaggcgcacaggatggagtgtgttacttcagtgtggtatggtgtaaggccagtaagaag
aaacacaagcgctgggagggggatgcagtgctggtcacaagaggacgctcagttgtactt
aaagacatggaagggaaggatattggaaagggcagtggctacaaagtgtcagagctggcc
tcactatctgaaggagaaactctgatgatcggagggaaagaggtggaggtgatgggaatc
atttctgctgaggactttgccaaaggtcgatgtttccaggaggtccaaacagattcagta
gagtccaacacgaagcctgctccgcctccctcacatcgctcggcttccaaacctttctgc
ccacctacgatggtgggcggagcagggcgtccagacactaaagcagaaaaagagcaagtg
tacagtcctcttcacaacccactagctccaggtgcactagtgatgcctcgcccctcttcc
aatcaccagtggcttcataataaatcagggctccctgtggttgatgttgtggttgatcca
cacctgtccacacacctacgacctcaccaaagagaaggcatcctcttcctctacgagtgt
gtcatgggcatgagagctgtgggacgctgcggtgcaatcctggctgatgagatgggtctg
ggaaagactctccagagcgtggcattgtcctggatgttgctcaaacaggggccttacggc
gggaagccagtgacaaaacgcatcctcgtggttacacctggcagcctcgtgcagaactgg
aaagctgagttcaccaagtggctgggacgtgagaggatcaacatttttaccgtggatcag
gatcacagaatagagcagtttgtgttgtctcctctacacaatgtgctcgtgatcagctat
gagatgctgctgcgctgcctggagcagatacagaaagtggagtttggtctcataatttgc
gacgagggtcacagattgaagaacagcagtattaaaacttcttctgctctcagcagcctc
agctgtagccgcagagtcattctctcagggacgccagtgcaaaacgacctgcaggagttc
tacgctattatagagtttgttaacccagggattctcggctcctcgactgcttatagaaaa
gtgtacgaggaaccaattctgcgctccaggcagccatcctgcacagaggaggagagagtt
ttgggagaagagagagcggcagaactctcccgtctcaccggcatgttcatcctgaggcgg
acgcaggagatcattaacagctacctgccgccccgtctggactggaccttgttctgcgag
ctgtcccctctgcagcaccagctgtacaagcacctcctcagccaccgcgtcttcagggca
tgtcttcagggctacagtcaaaccaacatgcacctggcctgcatcactgcactgaagaag
ctctgtaaccatcctggtttgcttcacatcagtgtcaaggagagaacagaccgcggatct
gtggagagttctttatacgagggcctcacggatctcttcccagaatcctattcttcagca
gaattcagcagcgaggactctggaaaactgatggttctttcagacctgctgagcgccatc
agacacctcagcccttcagacagggttgtcctagtgtcaaactacactcagacgctggac
ctgctacaggacctgtgcgtacacatgggctacaccttctgtcggttagacggccacacc
cccaccagccagcgacagcgtctggtcgacacttttaacagcccctattctcagaacttt
gtgttcctgctgagctccaaggcgggcggggtaggacttaatctgatcggcgcttcccac
ctggtgctgtacgacatcgactggaaccctgccaacgacattcaggccatggctcgagtc
tggagagatggacagaaaaagacggtgcacatttaccgtcttctcactgcaggtaccctg
gaggagcggatatttcagaggcaggtgtccaaacaggggctgtcaggcaccgttgttgac
ttggggaaaggagcagagcacacaagtttctccacaaatgaactccaagacctcttcagc
ctgacggacacgccttgtttgactcatgacctgctgaactgcgactgcagcgccgacggt
tctgtcagcgaggaagcagtggaagaggcggagcatgtttctcacagaccttgtcagctc
ggtcgtcaaggtgaccgcaaggaggcgtcgcagaagcatctgagcatgtcggagctcatg
cggtggagacacttctccggtgacacacacaccttctcagacccctacctcgatcacgct
cgaagccacatcaccttcgctttccagaccaccatctctcacacaactcaataa
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