Austrofundulus limnaeus (annual killifish): 106522666
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Entry
106522666 CDS
T06063
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04120
Ubiquitin mediated proteolysis
alim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106522666 (ube4b)
04120 Ubiquitin mediated proteolysis
106522666 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106522666 (ube4b)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106522666 (ube4b)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
U-box type E3
106522666 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
106522666
NCBI-ProteinID:
XP_013871215
UniProt:
A0A2I4BTY6
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGVSLQPVPSAS
QSLGLNVHIGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQNLSRSQSMDIDP
SSCEKSMSQVDVDSGIENMEVEESDRREKRNLTEKESSANSDVSEEQALHLICKILRVSW
KEQDRDVIFLPSLAVGFQQSPKDVYSDFKDLISQILLEVLMMSSQSNIHNPFASLTATSQ
PIAAAKSPDHRLXLVQPPNQADSPMGPSAGSFGASSLSSLYGCGSPHPMALDATSRTCSS
LSTPTTSAVPSTPSTPQFIVPPSPPASATLRHSLNPPSAPMPISQRYRPYSVTSSWGASS
PVSPGHRGFSFPGPPPSLTGPSVPPNTPVPATPLSPQILSLSSPSPLNQSSSTAPFVVPP
SPRMNARQAAFATRIPSSSPLSFLFFALSDVSQDSNDEDSEEEEEEDFAQVQFGSSLGAC
GGGMSSDSASDRFTIEACKETEMLNYLIERFDCVGMEERKAPKMCSQPNVSQLLSNIRSQ
CISHVALVLQGTLTQPRSPLQPSLLVPYMLCRNLPFGFIQELVRITHQEEEVFRQIFIPI
LHGLALAVKECSFDSDNFKYPLMALAELCEIKFGKTHPVCNLITSLPLWCPKPLSLGCGR
EIQRLSYLGAPFSLSVFAEDDTRVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKV
LHNILLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKL
ETVDPFYIFHPRCRLVVNLEETRLKATMEELKVWMTELHEDPSKFSEPKFPTECFFFTLH
THHLSILPSCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKL
VRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNIVLPLNPEIPKSFAALPEF
YVEDVAEFLLFVVQYSPQVLYEPCVQDVVAFLVVFICSQNYIRNPYLIAKLVEVLFVTNP
AVQPRTQRFSEMMENHPLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSL
WQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLDSLKRIHEVQEEMKNKEHWDQ
LPREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNF
NLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELF
EEVISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTD
PVMLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIHAWMREKQGGRLV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagattcgcagacggcgactggcacgactggcaggagga
cagacatcacagcccagcacccctcttagcacacccctcacgtccccacagagagagact
ccacctggacccctccctggaccctcaggtgtttcactccaacctgtaccttctgcttct
caatcattggggctcaatgtccacattggtacccctgccacttcccctatgggcacctcc
ggggtggcatatggaagtcagagcagtgaaggcgtgagctccctctccagctccccgtcc
aacagcctcgagacacagtcccagaatttgtctcgatcacagagcatggacattgaccct
tcctcttgtgaaaagagcatgtcccaggtggatgtagactcagggattgagaacatggag
gtggaagagagtgaccgcagagagaaaagaaacttgactgaaaaggaatcctctgcaaac
tctgatgtctcagaagagcaggctctgcatcttatttgtaagatcctccgcgtatcgtgg
aaggagcaggacagagatgttatcttcctcccgtcgctggctgtagggtttcagcagagc
cctaaagatgtgtactctgactttaaagacctcatcagccagattctattggaagtccta
atgatgtcatcccagtcaaatatccacaaccctttcgccagcttaaccgccacgtcacag
ccaattgcagcagcgaaatcccctgatcatcgtctgaygctggtgcaaccccctaaccaa
gctgacagtcccatgggtcccagtgctgggtcctttggtgccagctctctgtccagtcta
tatgggtgtggtagtcctcatccaatggctttggatgcaaccagcaggacttgctcatct
ctctccaccccaactacatccgctgttccttctacgccttctactccacagtttattgtt
ccccccagcccacctgcttctgccactctgaggcactccctgaacccaccctctgccccc
atgcccatctcccagcggtatcggccatactctgtcaccagttcctggggagcgtcttcc
ccagtgagtccaggtcacagaggatttagtttccctggacctcctcccagcctaactggg
ccctctgttcctcccaacacccctgttcctgcgacccctcttagtccccaaatcctctcc
ttgagctcgccaagccctctcaaccagtcctcctctacagccccttttgtggtgccgcct
tctcccagaatgaatgctcgacaggctgcctttgctaccaggattccgtcatctagtccc
ttgtcgttcctgttttttgcactttctgatgtgtctcaagacagcaatgatgaagattca
gaggaggaggaggaggaggattttgcacaggttcagtttgggtccagtcttggtgcgtgt
ggagggggaatgtcaagtgattcagccagtgatcgcttcacaattgaagcgtgcaaagag
acagagatgctgaactacctcattgagcgttttgactgtgttggcatggaggagaggaaa
gctcccaagatgtgcagccaaccaaatgtcagccagcttctcagtaacattcgctctcag
tgtatctctcatgttgccctggtcctgcaggggaccctgacccagcctcgaagcccctta
caaccatctctgctggtaccttatatgctgtgtcggaaccttccatttggctttattcag
gagctggtgcgtattacccatcaggaggaggaagtgttcagacagatyttcattcccatc
ctccatgggctggcccttgctgtgaaagaatgttcatttgacagtgacaactttaaatat
ccgctcatggcattagcggagctttgtgaaattaagtttggaaagactcaccctgtgtgc
aacttgataacatcgctgcctctatggtgtcctaaacctctgagccttggttgtggtaga
gagatccagagactgtcctatctcggagcgccctttagtctttctgtattcgctgaggat
gataccagagtaggagacaagtatttctctggcccagccatcaccatggagaacacacga
gttgtcagccagtcattgcagcactacctggagtcagcaaggggtgacctgttcaaagtt
ctccacaatattttgctgaatggagaaacacgcgagttagctcttaattacatggcagct
ctagtcaactacaatgtgaagaaagctcagatgcagactgatgacaagttggtgtcaaca
gatggcttcatgctcaacttcttatgggtgctgcaacagctgagcatgaagatcaagctg
gagacggtggaccccttctacattttccatccacggtgtcgccttgttgtcaatctggaa
gaaacgcgactgaaagccaccatggaggagctcaaagtctggatgactgagctgcatgaa
gatccatcaaagttttcagaacccaagttccccaccgagtgtttcttcttcacacttcac
acccaccatttgtccattctgccaagctgccggcgctacatccgcagattgcgtgccatt
cgagaactcaacaggactgtagaggagctcaaaaacagcgagagccaatggaaagactct
cccctggctagtcgacacagagaaatgctcaaacgatgcaaaacccagctgaagaaactg
gtgcgagccaaagcttgcgctgacgtgggccttctggatgagaacctgctccgcagatgt
ctgcagttttacagcacagtcattcagctcattcttcgcatggtggaccctgcctacccc
aacattgtgctgccattaaacccagagattcccaaaagctttgccgctctgcccgagttt
tacgttgaagatgtggcagagtttctgctttttgttgtgcagtactcaccccaggtttta
tacgagccatgtgtccaggacgtcgtcgccttcttggtggtgttcatctgcagtcagaac
tacatcaggaacccatacctcatcgccaagttggtggaggtgctgtttgtcaccaaccca
gccgtacagcctcgtactcagcgattctctgaaatgatggagaaccacccattgtctatc
aaacacctggtccctgctctcatgaagttttacactgatgtcgagcatactggtgctacc
agtgagttctatgataagttcactatacggtaccatatcagcaccatcttcaagagtctc
tggcagaatattgcccaccatggcacctttatggaggagttcaactctggcaagcagttt
gtgcgctacatcaacatgctgattaatgacaccaccttcttgctggatgagagccttgat
tccctgaagcgtattcatgaagttcaagaagagatgaagaacaaggagcactgggatcag
ctgcccagggagcagcagcagagccggcagtcccagctgactcaggatgagcgagtgtct
cgctcctatctagctctggccacagaaacggttgaaatgttccacattctcaccaagcag
gttcagaarcctttcctcaggcctgagctggggcctcgtttagctgccatgttgaacttt
aaccttcagcagctctgtgggcccaagtgtcgggacctgaaggtggagaaccctgagaag
tacggcttcgagcccaagaagctgttagaccagctgactgacatctaccttcagctagac
tgtgctcgctttgctaaagctattgcagatgatcagcgatcatacagccgtgaactgttc
gaggaggtgatctcaaagatgaggaaggctggtattaagtcctctattgccattgagaaa
ttcaagctgctatcagagaaggtggaggaaatagttgctaagaactcccagtctgaaatg
gactacagcgatgcacctgatgagtttaaagaccctctgatggacaccctgatgaccgac
cctgtgatgctgccttcggggaacatcatggacagatccatcattttgcgccacctgctc
aactcccccactgaccccttcaacaggcagccactcacagagagcatgctggagccagtg
cctgaattaaaggagagaatccatgcctggatgagagagaagcagggaggacgacttgtc
tga
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integrated database retrieval system
