Austrofundulus limnaeus (annual killifish): 106522747
Help
Entry
106522747 CDS
T06063
Symbol
nup88
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106522747 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106522747 (nup88)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106522747 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Herpes_IE2_3
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
106522747
NCBI-ProteinID:
XP_013871343
UniProt:
A0A2I4BUE7
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MAAFGAEKWLTELPNHAIFEKLREKLEFESKSNERGVVKNLTFCLGGDFFVWDDTERVFY
TTNLRQLNSEESRGGGKFQTLLCINPPLFDVCQVFVSPAQGHVALVGLRGVSVLELPQRW
GKRSEFEGGRDRINCKTIPVAERFFTSSPSVSLRQAAWYPSETDDPYLVLLTSDNTIRFY
GLKSSQTPAKVLPVSQGEDESSVRPPVRSYAASLGEIAVAFDFGPVSCPPRQLAAQYFKE
QPVYPLYILYENGETYVSYTGQTNGLSVSNPAGPLPMYPAAEDNYGYDACSILCLPCVPS
ILVIATQTGTLYHCVVLESEEEEDAGAVEKWIQIAGGAVPALYVFECVELELTLKVAADD
EEPQELDFTCPIRLRRDPLCPQRYHCTHEAGVHSVGLIWVHKLQRFLQSGEEDKDSLQEL
AAEKRCIVEHVLCTRPLLTNQSAPVWGFLIVSDLSLGATMICITSSYECVMLPLLSSIRP
PSPPLLCSQPGPGSGSSPLRGLASDSFEQHVRNILARGAANPLVLKAGDREAAPPPPPEC
LQLLSRATQVFREEYILKQDMAREETQRRVKLLREQKNKQLEELALCREEKKSLREAAER
LADKYEDAKYRQEATVSRVRRVLCSLQSQLPVLSNSEKDMKKELQSVSERLKHLDNCIRQ
VSMKMEYQKKQVDKDMSAARTTVSLDAHQKKVVQDVLREQGQQIGDMMKQIKDIKNHFSF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcggagcggaaaagtggctgactgagttaccgaatcatgccattttcgaa
aaattacgggaaaagttggagtttgaatcaaagtcaaatgaaagaggagtagttaaaaac
ctgacgttttgtttgggcggggactttttcgtgtgggacgacacggagcgcgtgttttac
accaccaacctgcggcagctgaattccgaggagagccgaggcggcgggaagttccagacg
ctgctgtgcatcaacccgcctctcttcgacgtgtgccaggtgtttgtgagccccgcgcag
ggacacgtcgcgctggtcgggctccgcggcgtgtcggtcctggagctcccgcagcggtgg
ggcaagcggtccgagttcgaagggggccgggaccggatcaactgcaaaaccatcccggtg
gcggagcgcttcttcaccagttccccgtccgtgagtctgcggcaggcggcctggtacccg
agcgagaccgacgacccctatctggttctgctcacatccgacaacaccattcggttctac
ggcctgaagtcgtcccagaccccggccaaggtcctgccggtgtcccagggtgaggatgaa
agcagcgtccggcctccggtccggtcctatgctgcgtctctgggagaaatagccgtggct
tttgactttggaccagtttcctgtcctcctcggcagctggcagctcagtacttcaaggag
cagccggtctatcctctctacatcctgtatgaaaacggggaaacctacgtgagctacacg
ggtcagaccaacgggctgagcgtcagtaacccagccggacccctgcccatgtaccccgca
gccgaggacaactacggctacgacgcctgctccatcctgtgcctgccgtgcgtccccagc
atcctggtgatcgccacccagaccgggacgctgtaccactgcgtggtcctggaatcggag
gaggaggaggacgccggggcagtggagaagtggatccagatcgccgggggggccgtcccg
gcgctctacgtgttcgagtgcgtggagctggagctcacgctcaaggtggcggcggacgac
gaggagccccaggagctcgacttcacctgtcccatcaggctgcgccgagacccgctgtgc
ccgcagcggtaccactgcacccacgaggcgggcgtgcacagcgtggggctgatctgggtc
cacaagctgcagaggttccttcagtcgggcgaggaggacaaggacagcctccaggagctg
gctgcggagaagcgctgcatcgtggagcacgtcctctgcacccgccccctcctcaccaac
cagtcagctcctgtttggggcttcttaatcgtctccgacctctctttgggcgccaccatg
atctgcatcacctcctcctacgagtgcgtcatgttgcccctgctgagctccatccgcccc
ccgtcccctcccctgctctgctcccagccaggtcccgggtccgggagctcgcccctgcgc
gggctcgccagcgactccttcgagcagcacgtccgcaacatcctggcccgcggcgccgcc
aacccgctggtgctgaaggccggcgacagggaggcagcgccgcctccgccgcccgagtgc
ctgcagctcctcagcagggccacgcaggtcttccgcgaggagtacatcctgaagcaggac
atggcccgcgaggagacgcagcggagggtgaagctgctgcgggagcagaagaacaagcag
ctggaggagctggccctgtgccgcgaggagaagaagagcctgagagaggcggccgagagg
ctggccgacaagtacgaggacgccaagtaccgccaggaagccaccgtgagcagagtgagg
agggtcctgtgcagcctgcagagccagctgcccgtcctgtccaacagcgagaaggacatg
aagaaggagctgcagagtgtgagcgagcggctgaaacacctggacaactgcatcaggcag
gtcagcatgaagatggagtaccagaagaagcaggtggacaaggacatgtctgcggccagg
accaccgtctcactggacgcccaccagaagaaggtggtccaggacgtcctcagagagcag
ggacagcagattggggacatgatgaagcaaatcaaagacatcaaaaaccacttcagcttc
tga
DBGET
integrated database retrieval system
