Austrofundulus limnaeus (annual killifish): 106522759
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Entry
106522759 CDS
T06063
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04137
Mitophagy - animal
alim04140
Autophagy - animal
alim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106522759
04137 Mitophagy - animal
106522759
04148 Efferocytosis
106522759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106522759
Transcription factors [BR:
alim03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106522759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
106522759
NCBI-ProteinID:
XP_013871364
UniProt:
A0A2I4BUG6
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MEKEIGTVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRKVCTHLDKAGIM
RVALSFLRLQQLLRPEGGEEDEKDEDPMDAFYPEALAGFIMVMTEEGDMIFLTENVNKHI
GITQLDLLGQSVYDFVHPCDQEELRDLLTPRPGLGKKFQAEQPSERNFFLRMKSTLTSRG
RTVNIKSATWKVLHCTGHVRPLGGSASTPAAQVMTLLCEPIAHPSSVEFPLDTCTFLTRH
SMDLRFTHCEGRVAELVGYKPDDLIGRSAYEFYHALDCERIRRSLQTLLSKGQVNTSHYR
FLANSGGYVWAETQATILYNNKTSQPEAIVCLNFILSAVEQPDVVFSAEQTRCSCPAKTE
LLSPDHAPEDSGISTCESDGEHAAGFSEPEDLELGSPIKIFLKLEENPDELLQLAPDAAE
PLAASPAELSFASPPSPSLVPEDPKDLCTPELRKLLSPIFDSISPSSSSCPEAALSPGKQ
EEVMDTSEVEKFFTFCPEVAQKKPETLQDMEEMDLEMLAPYISMDDDFQLTFLSALPEDA
DKPPSFSFESSDMASAVTASRKRTRDSDDQIQDKRQKPEPSSIEEELLLSQRLLDSLEGA
DQSDLILDPKPCSQLLTDRDPVLGGVQGLCDTAALMDMFAPRTANLSPLT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaatcgggactgtggcggttaaacggagcagctcggagcagaggaagctg
cgctcccgggacgcggcgcgatgtcggcgcagtcaggaaacggaggtgttctacgagctg
gcccgcacgctgccgctgccgcgcaaagtctgcacccacctggacaaggcgggcatcatg
agggtggcactcagcttcctgcggctgcagcagctcctgagacccgaaggaggtgaggaa
gatgagaaggatgaagatccgatggatgcgttctaccccgaggcgctggccggtttcatc
atggtgatgacggaggagggcgacatgatcttcctgacagaaaatgtcaacaaacacatc
ggcatcactcaactggacctgctgggtcagagtgtttacgacttcgttcatccctgcgat
caggaggagctcagagatctgctgactccacgtccaggtctggggaagaagtttcaggcc
gaacagccgagcgagagaaacttcttcctgcggatgaagagcacgctgaccagcaggggg
cgcaccgtcaacatcaagtctgccacctggaaggtgctccactgcaccggtcacgtccgt
ccgctcggaggctcggcgtcgacccccgccgcccaggtgatgacgctgctgtgcgagccc
atcgctcacccgtccagcgtggagttccctctggacacgtgcacgttcctgacccggcac
agcatggacctgcgcttcacgcactgcgagggaagggtcgcagagctggttggatacaaa
ccggacgatctgattggacgctcggcctacgagttttaccacgcgctggactgtgagcgc
atcaggaggagtctgcagaccttgctctccaaaggtcaggtaaacaccagccactaccgc
ttcctggccaacagcggcggctacgtgtgggcggagactcaggcaacgatcctctacaac
aacaagacgtctcagcctgaagccatcgtctgcctcaacttcatcctcagtgccgtggag
cagccggacgtggttttctccgctgagcagacccgctgcagctgcccagctaagactgag
ctcctctcaccggaccacgcaccggaggacagcggcatctccacctgcgagtccgacggc
gagcacgccgccggtttcagtgaacctgaagacctggagctcggcagccccatcaagatc
ttcctgaagctggaggagaatccagacgagctcctgcagctggctcctgacgccgccgag
ccgctggcagcgagtccagctgagctgtcgtttgccagtcctcccagtccttccttggtg
ccagaggatcctaaagacctctgcactccagagctgaggaagctcctctcacccatcttc
gactccatcagcccctcatcttcctcctgcccagaagcagctctgagcccaggtaagcag
gaggaggtgatggacaccagcgaggtggagaagttcttcacgttttgtccagaagtggct
cagaagaaaccagaaacactgcaggacatggaggagatggacctggagatgttggctcct
tacatctccatggacgatgacttccagctgacattcctcagcgctctgcccgaggatgcc
gacaagccgccgtccttctcgtttgagagctcagacatggcttctgcagtgaccgccagc
agaaaacgaactcgagactctgatgatcagattcaggacaagaggcagaaaccagaaccg
tcctccatcgaagaggagctcctcctcagccaaagactgctggactctcttgagggagcc
gaccagtcagacctgattctggacccgaagccatgcagccagctgctcacagatagagac
ccggttctgggaggcgttcagggactgtgcgacactgcagctctgatggacatgttcgcg
cctcgcaccgccaacctctcacctttgacctga
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