Austrofundulus limnaeus (annual killifish): 106522815
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Entry
106522815 CDS
T06063
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106522815 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106522815 (exosc2)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106522815 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106522815 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
106522815
NCBI-ProteinID:
XP_013871450
UniProt:
A0A2I4BUM5
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MAVDMRLPTVKKTITSLSVSALDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGK
VQRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGE
LRRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLI
KRQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRN
CLLALAAHKVLLFDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKLLEHES
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggacatgagattaccgactgtcaagaaaacaatcacgtctctgtctgtttct
gctttagacagaaaagatctggtcgtgcctggtgatgttattacctcagacactggtttc
atgaggggtcatgggacatatgttgacgaggacaagctgacagcttcagtcgctggaaaa
gtccagagagtggacaaactaatatgtgtcagaccgctaaagacaagatttaatggtgaa
gtgggagatgttgtagttggcagaatcacagaggtgcaacagaaacggtggaaggttgag
accaactccagacttgactctgtactcctgttgtcttcggtcaatctgcctggaggagag
ctgagaagaaggtcagctgaagatgaactcaccatgagagagtacctccaggaaggtgat
ctcatcagtgcagaggtgcagtcggttttctcagatggagctctttctcttcacacccgt
agtttaaagtatggaaaattgggtcaaggagtgctggtccagctttcaccttctttgatc
aagaggcagaaaacacatttccacaacctaccgtgtggtgcctccatcatcctgggcaat
aacggctttgtgtggttgtatccgactccgggacaacaggaggaagaagctggaggcttc
tacaccagtctggagcctgttagtctgtcagatcgagaggtgatttcacggttgagaaac
tgcctgctggctttggctgctcacaaagtgcttctgttcgacacgagtgttctgtattgc
tacgaatcatcactccagcaccaggtcaaggacatcttgaaaccagaagtgatggaggag
attgtgatgttgacacagcagaagctgttagaacatgaaagttaa
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