Austrofundulus limnaeus (annual killifish): 106522823
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Entry
106522823 CDS
T06063
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106522823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106522823
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106522823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
106522823
NCBI-ProteinID:
XP_013871459
UniProt:
A0A2I4BUR5
LinkDB
All DBs
Position
Unknown
AA seq
3091 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISDEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLSMNPRIFRDKSSLQQPLIQQ
YKISQNHGSPASNYQQTTVSQSPSGCFTSPQCGTATQFVPQQNSPIPSPYTPQSPADFIQ
YNPPSYSHHQQTQQVASGVRNIHDNKVSEHLSSNSSNHNTRLGSDDDYMNVAHRLEDEEN
DSSMKVALFPVKSHPVCSPTRSEEKAKRSRPPLIMQSPPVEEQGASPDPLLTATDRKKKQ
RDKNKDENDHMDKNVYYDIVSSPSKDSAKLTLKLSRVKVQGLNQSEELSPRSNMDSESDH
KTVILNNNNQLFSTPQDFSHKLEAEEQENCQQVAVQPNTKETGIISVFDDSEIDALAEID
RIECESANERERYPKEVQDKDKPLKKRKQDTYPQEHEVETSEGPAVHGANSISRLTPKKS
STASNGTVRPALMVSIDLQHAGRKVGQPVVMLEPQPLCEDHVRRIKTNADEKVNKAAEHR
PGIIRQLLDTCHTSGTDEHKDTHKQKQESRCELRHKHDTNTDHNTEHSDNIQLDMAWQKH
DRLSDSRPKEEKINSHRSHGSRPEIPKSTGKVDCNARHEDDKGIDIEKDMNRETQRDRDE
HKGKLRNKSKVRDRVKPSERDKDREKDRCRDKDREEDEEINTGKDKDKNKVKNRNMDREK
DKDRNRGREKDVDTEKEKNGNGGKEQGLDSNGDNNRDEVTEMNRNKGRSRVKITDMDRSR
GREDMDREKIKDRNKSKENDKGVERELDKDMIGDIDKDKNEENRDKDKDRNRVKNRVLDR
EKDKTRKRDKEKYLEREKDRDGIGDQDKDEGKEISRDKDKKKVKNRQIDRQKDKDGIEDK
DRDEDKEISRDKDKKKVKNRDMDREKDMDGTGDKDRDKDKKKAKNRQMDREKDKDGTEDK
DRDKDREINRDKDKKKGKNRDMDREKDMDGTGDKDRDKDKKKVKNRQMDREKDKDGIEDK
DRDKDKKKGKNRDMDREKEKDGIGDKDRDADTDSKRDKDKKKSKNRDMDREKDKERIRDD
KKELDREKYKGRNRGKDKDVDREMDISEDKGRDDEEMNKDKDKDRNRVRNRVLDREKDKD
WYRGKEDKCLDRERDTDRDKGWNSKHRTLSKDVCSKSSHDQDTKPESPKTKQDGSRKSAD
LNGGQKTGSSSHQNPTNKDHRTSRDGNVICLAGNKRPASETKTSELPSYLLGGSTGSLKN
FVIPKLSRTGADKDPKSTLFFAWSEPRVRLERVSLIQTLNKKSKPVVVLRRLSIEDVKRM
IKETKDAHSSRSKYWSSFQSSTRGMFCERANKRRHSMISQRSKYAEVDSNDDTESDSDGQ
SARKRKKGNHDKTWKFEEKKGSRDRRRSGGFSNSRRNRDWSSDSSDQDSSPPRMNDVSRK
MQKKAKQKSRMMFDSMTTEEKLDSSTFKRFASNVDSILESLDDVDLTAADDDEIPQELLL
GKQQLSELGSDSTMIKAMGVFCKFSSSKLVKILNVLEKNIKDSVTLSTLMSHDDSMDEER
LWRDLIMERVTKSADACLTALNIMTSPHMPKVVYIEDVIERVLQFTKFHLQSTLYPQYDS
AYRHGGGTHSSKSKRAKSSGHKQKVIVVLYNKVCDIISNISELLEIQLLTDTTILQVSHL
GITPFFVENVSELQLCAITLVTAVFSRYEKHRQLVLEDIFTSLARLPTSKRSLRNFRLNS
SDFEGEPLYIQMVSALVLQLIQCVVNFPFERETEEERNKKVDKDAFITNSYETAMRTAQN
FLSVFLKKCGSKQGEEDYRPLFENFVHDLLSAVNKPEWPAAELLLNLLGRLLVHQFSNKQ
TEMALRVASLDYLGTVASRLRKDSLSSKMDQRTIDRILKETPGSDEIQQLQKALLVFLNG
NIDNDPALLFARNFYIAQWYRDNTVEVEKAIKSQNENDEDSKGWRHSKNADPSEEIAQNA
EARKKFLRKIIKTAPSNFSSLRGNSDTVDYEDSCLIVRYLASLRPFAQSFDIYLSQILRV
LGESAIAVRTKAMKSLSEVVAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVL
SRPELIEQYYDMLIERILDTGISVRKRVIKILRDICLEQPDFHKITEMCVKMIRRVNDEE
GIKKLVNETFQKLWFSPTPNHDKEAMSRKILNITDVVLACKDTGYDWFEQLLQNLLKSEE
DASYKPTKKACIQLVDNLVEHILKYEESIADCEDKGVNSGRLVACITTLYLITKIRAQFM
VKHAMTMQPYLTIKCNTQNDFMMICNVAKIVELVVPLIDEPSETFLATIEEDLMKLIIKY
GMMVVQHCVSCLGAIVNKVTHNYKFVWACFNRFYGVLVKLKTQHQEDPSSSTLAANKPTL
LRSLFTVGALCRYFDFDQEEFKGANKIIIKEKVLELLLYFTTHVDEEVQTKAIMGLGFQF
IMHPELMFVQDIKVLYNNLLSDDNSAVNLKIQVLKNLQTYLQEEDSRMQEADREWKNQAK
QEDLKEMGDISSGMSSSIMQIYLKQVLESFFHSQSTVRHFALSVITLTLCQGLIHPVQCV
PYLIAMGTDPEPTMKNKADQQLVEIDKKYSGFIHMKAVAGLKMSYQVQQAINAGKSAVIR
GFRHDDSDSALCSHLYTLVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFVADNLACFPY
LTQEEPLFIMHHIDITLSISGSNLLQSFKECLRKEPVRHEKKVKTKKRKKKHSRRRKSSS
DEDEEEEERQSSSTSSSSDEEEEVVHKRKKPGAPDSDSDLDDEEAVLDRLPDNTAPLLEF
ASASQGVLLLLVLKQHLKNLYGFSDSKIQKYSPTELAKVYDKAVNRKSKVHFSPRQTLDY
LKSNLANRELSYESKKNIIKQYLDFKVLMEHLDHEEEDEEEGEANANARNKAISSLLKGP
KPQNHSNHTAPLETEDEESEEEDPPARKPKKGGDSAEDVGNLNETVEVMDVVAVFRPKYK
DRPQIAKVVQKSRSGYSIHWMTGSYSGQWTTAKKRDGRKKVPWVDTIKESDIICKKISLT
SGQKLSTKTAQTLRALYVAKEGTKSSKLQLN
NT seq
9276 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcttaacc
gacttattaaaccagctgcctttaccttctcctcttccggccaccactgctaaaagtctg
ctctacaatggaaggatctctgatgaggtcagcagcctgttggtgtgtcgagatgagaat
ctggtgactcagctggcacatagccttaaccaggtctccactgaacacatagagctaaag
gacaacctgggaaatgatgaacctgagggggatatgccaatacttcttcaaactctactg
tctatgaaccccagaatcttcagggacaaaagttcattgcagcagccactgatacagcag
tataagatttctcagaatcatgggagtccagcatcaaactatcagcaaaccactgtctct
caaagcccctctggatgctttacatccccacagtgtgggacggctacacagtttgtacct
cagcagaacagtccaatcccaagtccctatacccctcagagcccagcagacttcatccag
tacaatccacctagttactctcatcatcagcaaactcagcaagttgctagtggagtgaga
aatatccacgacaacaaagtttctgaacatctgtcaagtaattcatctaaccataataca
agacttggctcagacgatgactacatgaacgtcgctcatagactggaagatgaggaaaat
gactcttctatgaaggttgctctgtttcccgttaaatctcatcctgtgtgttcccccact
aggagtgaagagaaagcaaaaaggtccaggcctcctctcatcatgcagtcacctccagtt
gaagaacaaggtgcatcacctgacccactcctcactgcgactgaccgcaaaaagaaacaa
agagacaaaaacaaagacgaaaatgaccacatggacaaaaatgtttactatgacatagtc
agttctccatctaaggactctgccaagctgacattaaagctttccagagtgaaggttcaa
ggcctgaaccaatctgaagaactgtccccgagatcaaacatggactcagagtcagaccac
aaaacggttatattgaacaataataatcagttgttcagtactccacaagacttttctcac
aaattagaagccgaggagcaggaaaactgtcaacaggttgctgtgcagccgaatacaaag
gaaactggaatcatcagcgtgtttgatgactctgagatcgatgcacttgcagaaattgac
agaatagaatgcgaatcagccaatgagagagaacgatacccgaaagaggtccaggacaaa
gataagccactgaaaaaacgtaaacaagacacatatcctcaggaacatgaagtcgagaca
agtgaggggcctgctgtgcatggggccaacagcatcagcaggctgacacccaaaaaatca
agtactgcaagtaacggtaccgttcgacctgccttgatggtcagtattgatctacagcac
gctggcaggaaagtaggacagcctgtagtgatgttggaaccgcagccgttgtgtgaagat
cacgtacgtcgcattaagacaaacgctgatgaaaaggtcaataaagctgctgaacacaga
cctgggatcatcagacagcttcttgacacctgccacacgtctggtacagatgagcataaa
gacacccataagcagaagcaggaaagccgatgtgaattaagacacaaacacgacacaaac
actgaccacaacacggaacattcagataatatacaattggacatggcatggcagaaacat
gacaggctttcagattcacgtcccaaagaggaaaagatcaacagtcacagatcccatggc
agcagacctgaaattccaaaatccacgggcaaggtggactgtaacgccagacatgaagac
gacaaaggcattgatatagaaaaggatatgaacagagagacgcagagggacagggatgaa
cacaaaggcaaactcaggaataaaagcaaagtgagagatagggtcaaacccagtgaaaga
gacaaggacagagaaaaagacaggtgtagagacaaagacagagaagaagatgaggagata
aacacaggtaaagacaaagacaagaacaaagtcaaaaacagaaacatggacagagaaaaa
gacaaagacaggaatagaggaagagaaaaagacgtggacacagaaaaagaaaagaatggg
aatggaggcaaagaacagggcttagacagcaatggagacaacaacagagatgaagttaca
gagatgaacagaaataaaggcaggagtcgagtcaaaatcacagacatggacaggagtaga
ggtagagaagacatggacagagaaaaaatcaaagacaggaataaaagcaaagaaaatgat
aaaggcgtggaaagagaattggacaaagacatgattggagacatagacaaagataaaaat
gaggagaacagagataaagacaaagataggaatagagtcaaaaacagagtcttggacaga
gaaaaagacaaaactaggaaaagagacaaagaaaaatatttagaaagagaaaaagacagg
gatgggattggagaccaagacaaagatgaaggcaaggagattagcagagacaaagacaag
aaaaaagttaaaaacagacaaatagacagacaaaaagacaaggatgggattgaagacaaa
gacagagatgaagacaaggagattagcagagacaaagacaagaaaaaagttaaaaacaga
gacatggacagagaaaaagacatggatgggactggagacaaagacagagataaagacaag
aaaaaagctaaaaacagacaaatggacagagaaaaagacaaggatgggactgaagacaaa
gacagagataaagacagggagattaacagagacaaagacaagaaaaaaggtaaaaacaga
gacatggacagagaaaaagacatggatgggactggagacaaagacagagataaagacaag
aaaaaagttaaaaacagacaaatggacagagaaaaagacaaggatgggattgaagacaaa
gacagagataaagacaagaaaaaaggtaaaaacagagacatggacagagaaaaagaaaag
gatgggattggagacaaagacagagatgcagacacagatagtaaaagagacaaagacaag
aaaaaaagtaaaaacagagacatggatagagaaaaagacaaggagagaattagagacgac
aaaaaagaattggacagagaaaaatacaaaggcaggaatagaggcaaagataaagatgtg
gacagagaaatggacataagtgaagacaaaggcagggatgacgaagagatgaacaaagat
aaagacaaagacaggaatagagtcagaaatagagtcttggacagagaaaaagacaaggac
tggtatagaggcaaagaagataaatgcctggacagagaaagggacacagaccgagacaaa
ggctggaacagcaagcacaggacattgtcaaaagacgtttgcagcaaaagctcccacgat
caggacactaaacctgaaagccccaaaacaaaacaagatggaagcagaaaatctgctgat
ctgaatggaggacagaagacaggcagctccagccaccaaaatcccacaaataaagaccac
agaacaagcagggatggcaacgtaatctgcctggctggaaacaaacggccggcctctgaa
actaagaccagcgagctcccctcatacctgctgggcggctctacaggaagccttaagaac
tttgtgattcctaaactgagcagaactggagcagataaggaccccaaaagcactttgttt
tttgcctggagcgaacctcgtgtgagattggagagagtgtcgctcatacagaccttaaac
aagaaaagtaagccagtcgtcgtgctgaggagactcagcattgaggacgttaaaaggatg
attaaggaaaccaaggatgcacacagctctcgatccaaatactggtcctcgtttcaaagt
tcaaccagagggatgttttgcgagagagcaaataagcgacgacacagcatgattagtcag
aggtctaaatatgctgaggtggactccaacgatgatacagagtctgactctgacggccaa
tctgcaagaaaaaggaaaaagggcaaccatgacaagacatggaagttcgaagagaagaag
ggctccagggaccgccggcgaagtggaggcttttctaactcacgccgtaaccgagactgg
agctcagatagttcagatcaagactcttcacctcctcgcatgaatgatgtttccagaaaa
atgcagaaaaaggccaaacagaaaagcagaatgatgtttgattccatgacaacagaggaa
aagttggactcctctacatttaagagatttgcatctaatgtggacagcattcttgagagc
ctggatgatgtagacctcactgcagcagatgacgatgagattcctcaagagctcctcctt
gggaaacagcagctgagtgagctgggcagcgattctaccatgattaaagctatgggcgtc
ttttgcaagttttcatctagtaaactggtgaaaattctgaacgtactggagaagaacatc
aaagacagtgtcactctctccaccttaatgagtcacgatgactccatggatgaagagcgt
ttgtggcgtgacctcatcatggagcgtgtgaccaagtctgcagacgcctgtttgactgcg
ctcaacataatgacgtctccacacatgcctaaagtcgtttacatcgaggacgtgatcgag
agggtgctgcagttcaccaagttccacctgcagagcactttgtaccctcagtacgattct
gcctacagacacggaggtggcacccactcttcaaagtccaagagagcaaagtcttccggc
cacaaacagaaagtgattgtggtgctctacaacaaagtgtgcgacattatcagcaacatc
tcagagctcctggaaatccagctgctcaccgacaccacaattctccaggtgtcccacctt
ggtattacaccgttttttgtggagaatgtcagcgaactgcagttatgtgccatcacacta
gtgacagcagtgttctctcgttacgagaagcacaggcagctggttcttgaagacattttc
acttccctggcaagacttcctacgagtaaacgcagtctcaggaactttaggctgaacagc
agtgattttgaaggagagcccttgtacatccagatggtctcagccctcgttcttcaactc
atccagtgtgtggtcaactttccctttgagagggagacagaggaggaacgcaataaaaag
gtggataaagatgctttcattacaaattcttatgaaactgccatgaggacagctcagaac
tttctctcagtttttcttaaaaagtgtggcagtaaacagggcgaggaagactacaggcct
ctgtttgagaactttgttcatgacctgctgtcagctgtcaacaagcctgagtggcctgca
gctgaactgctgctcaatttactgggccgacttctggtgcaccagttcagcaataagcag
acagaaatggcactcagggtggcatcgctggactacctcggtactgttgcctcccgcctg
cgtaaagattctctctccagcaagatggaccaaagaactattgatcgcattcttaaagag
actccaggcagtgatgagatacagcaactccaaaaggctttgttggtctttctaaatgga
aacattgataatgacccagctttactgtttgccaggaacttttatattgcccagtggtac
agggataatacagtcgaggtggaaaaagcaatcaagtctcaaaatgaaaacgatgaggac
tccaaaggttggcggcattccaaaaatgccgacccaagtgaggagattgcgcagaacgct
gaggcacggaagaaattccttcgtaagatcatcaagactgcaccttcaaacttcagctct
ctgagagggaattctgacacagtagactacgaagactcttgtctgattgtcagatatctg
gcctctttgagaccgtttgcacagagctttgatatttatttatcacagatcctgagagtg
ctgggtgagagtgccatcgcagtgagaactaaagccatgaaaagtctgtctgaagttgtg
gctgtggatccaagtattttagcacgattggacatgcagcgcggagtacattgtcgcctc
atggataattccacaagtgtacgagaagcagcggtagagcttcttggtcgctttgtgctg
agtcgacctgagctcattgagcaatattacgacatgctcattgaaagaatactggacacg
ggtatcagtgtaagaaaaagagtcattaagatcctaagggacatttgcttggagcagccg
gacttccacaagatcaccgagatgtgcgtcaagatgatccgaagagtcaacgacgaagaa
gggatcaagaaactggtgaacgagacattccagaaactctggttttctcccacgcccaat
cacgacaaagaagccatgtccaggaagatcttgaacatcacagatgttgtgttggcgtgc
aaagatacaggttatgactggtttgagcagcttctgcaaaatcttctgaaatcagaggag
gatgcttcgtacaaacctaccaagaaggcttgcatccagttagtggacaatttagtggaa
catatcctgaaatatgaggagtctattgcagactgtgaagacaaaggggtgaactcaggc
cgtctggtagcgtgcatcaccactctctacctgataactaaaatcagagcccagtttatg
gtcaaacatgccatgacaatgcagccctacctgaccatcaaatgcaatacccaaaatgac
ttcatgatgatttgcaatgtggccaagatcgtggagcttgtcgtgcctctgattgatgag
ccaagtgagacgttcctcgccacgattgaggaagacctgatgaaactcattatcaaatac
ggcatgatggtggtgcagcactgtgtgagctgtctcggcgctatcgtgaacaaggtcaca
cacaactacaagtttgtttgggcttgtttcaatcgattttacggagttctggttaaattg
aagacgcagcaccaggaagaccccagcagctccactttggctgctaacaaacccaccctg
ctgcgttccttgtttaccgtgggggctctctgtcgatactttgacttcgaccaagaagag
ttcaagggtgccaacaagatcatcattaaggaaaaagtcttggagcttctgctgtatttc
accactcatgtggatgaggaagtccagaccaaggccatcatgggtctagggttccagttc
atcatgcacccagagctcatgtttgtgcaggacataaaggtcctgtataacaacttactg
tccgatgacaacagtgctgtcaacctaaagatccaggtgctcaaaaacctgcagacgtac
ctgcaggaggaggactctcgaatgcaggaggcagaccgagaatggaagaatcaagccaaa
caggaagatttgaaggagatgggagacatctcatcaggcatgagcagctccattatgcag
atttacctcaagcaggtgctggagtccttcttccactcgcagtccacggttcggcacttt
gctctgagtgtcatcactctgactctctgccagggcctcatccaccctgtacagtgtgtg
ccctacttgattgccatgggcacagatccagagccaaccatgaagaacaaagcagaccaa
caactagtggaaattgacaagaagtattcaggtttcatccatatgaaggctgttgcgggg
ttgaagatgtcctatcaggtgcagcaggccataaatgctggcaaaagtgcggtgattcga
ggttttcgtcacgacgactcagactccgccctctgctctcatctctacacattggtccgc
gggaaccgacaacacagacgagctttcctcatttccctcctcaacctgttcgatgacagc
tctaaaacagaggtgaacatgctgctctttgtagccgacaacctggcctgcttcccgtac
ttaacccaggaagagcctctttttatcatgcaccacatagacatcactctgtctatctct
ggcagcaacctgctccagtctttcaaggagtgtttacggaaggagcccgtaaggcacgag
aagaaggtaaagactaaaaaaagaaaaaagaagcattctcgcaggaggaaaagcagttcg
gatgaggatgaagaggaggaggaaaggcagagcagcagcacatctagcagcagtgatgag
gaagaagaggtggttcacaaaagaaagaagcccggagcccccgactcggactcagatttg
gacgatgaggaggcggtgttggaccgtttgcctgacaacaccgcccctctgctggaattt
gcgagcgcttcacagggtgttctgctcctgctggtgctcaaacagcatctgaaaaacctg
tacggcttctcagacagcaaaatccagaagtattcaccaacagagttggccaaagtctat
gacaaggctgtgaacaggaagtccaaggtgcacttcagtcctcgtcagactctggattac
ctgaagagcaacctagccaacagagagctcagctacgagtcaaagaagaacatcatcaaa
cagtatttggatttcaaggtactgatggagcacttggatcatgaggaagaggatgaggag
gaaggtgaagcgaatgccaacgccagaaacaaagccatcagttctctgctgaagggcccg
aaaccccaaaaccacagcaatcacactgctcccctggagacagaggatgaggagagcgag
gaagaagatcctcctgcgcgaaaaccgaagaaaggcggggattccgcggaggatgtgggt
aacctgaacgagacagtagaagtgatggacgtcgtcgccgtcttccgccccaaatacaaa
gacagaccgcagatcgccaaggtcgtccagaagagcagaagcggctacagcatacactgg
atgacgggatcgtactccggacagtggactacggcaaagaagcgggatggtcgcaaaaag
gtgccttgggtcgacacgatcaaggagtcggacatcatttgcaagaaaatctccttgacg
agtggacagaagctctcaacgaaaacggcacagacgttacgggcgctgtacgtcgccaag
gagggaactaagagttcaaaactacaactcaactga
DBGET
integrated database retrieval system
