Austrofundulus limnaeus (annual killifish): 106522833
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Entry
106522833 CDS
T06063
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106522833 (chd5)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106522833 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
Motif
Other DBs
NCBI-GeneID:
106522833
NCBI-ProteinID:
XP_013871478
UniProt:
A0A2I4BUT3
LinkDB
All DBs
Position
Unknown
AA seq
1997 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDLPDDDDEGERNSLPLRPLASFFSDNDLLKQQKKKKPKKNK
ESKIPKVNKRKKEAGLQTRVDSDLDEVSEVEEERERPEVGSESESSAYGLTKKKKKKPKE
KKEKKPRKKKRDEDDEDDDDDDGNMKEPKSSSQLMHEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVEMVTVD
QPTSVCSSQLSSQQGPIKKAKTKEGKGPGVRKKTKTVKEAKKKPKPKKNKSKLGQSGKKK
KVSSSEEDFLEESDFDDISIHSASVLSDALGAATKKKARRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEE
AAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQRILHWRWGEPPLPAEPPAGPDGKPTDPLTKPPLKGRPEREFFVKWAGLSYWHCSWA
SELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGEEELNNEKRKSKDPQYAVMEERFYRYG
IKPEWMVIHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEADDFDVPDYDIHKAFYWDHRE
QILGEDQRPLVVRKGRKLKEDYPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVVTYTGDKDSRATIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEI
QNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQL
KNEKDKPLPPLLARVGGSIEVLGFNTRQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGMELKKLTESVSSDPNTPVPASPVATQPSTPVPPGTESFVGNAEDKES
TEQDGKKSSEQEQASSAEPASAPDSEESKASSEEKTEDERNRTKSPAAKAEPCAHPKEPT
FKQTEPPSSHASPKTDPCKEVEKPSEKGDAGSPREKSEDKENKPDDVKSEAALEGRLNGD
KDTLDEMDESRKEEKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKIHDIWHRRHD
YWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKLLEQALV
IEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVL
NQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPLQQTFSQGGF
SCTQMYSSTFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNAPLTPTSHLDKKSLDSLRDVA
TPELKSGKSSDVICIED
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaggacgagggacaggacgacatggattttgaagacgat
ctgccagatgacgatgatgaaggtgagcgcaacagtcttcccctcaggcccctcgccagc
ttcttctctgacaacgacttgctcaaacagcaaaagaagaagaagcccaaaaaaaataaa
gagagcaaaatacccaaagttaacaagaggaaaaaagaggcaggactccagacacgagtg
gacagtgacctggatgaggtctcagaggtagaggaggaacgagaacgcccggaggtcggc
tcagagagcgagagcagcgcctatggcctcaccaagaagaagaagaaaaaacccaaggag
aagaaagagaagaagcccaggaagaaaaagagagacgaggatgatgaggatgacgacgac
gatgacggcaacatgaaagaacccaagtcatccagccagctgatgcatgaatggggtctg
gaggacgttcaatacggcttcactgaggacgactacaaaaccatcaccaactacaaggct
ttcagccagttcctccggcctctcattgccaagaagaatcccaagattcccatgtcaaag
atgatgacggtgttaggggccaagtggcgcgagttcagtgccaacaacccgttcaaaggc
gcatctgccaccgccgtggccgctgccgtggctgccgcagtggagatggtcactgtggat
cagccaacatctgtctgcagcagccagctgagctcccagcaggggccgatcaaaaaagcc
aaaaccaaagaaggaaaaggaccgggcgttagaaagaaaaccaagactgtgaaagaagca
aagaagaaaccgaagccgaagaagaacaaatccaagttgggtcagagtgggaagaaaaag
aaagtgtcctctagtgaggaggactttctggaggagtccgactttgatgacatcagtatc
cacagtgcctctgtgctttctgatgccttgggggccgccaccaagaaaaaggcccggcgt
gggcggaaaaaaagaaaaaaggaggacggtgatggctacgagacagaccaccaggactac
tgtgaggtttgccagcaggggggagaaattatcctgtgtgacacctgtccaagagcctac
cacctggtgtgtctggaccctgagctggagaaagcacctgaggggaagtggagctgtcca
cactgtgagaaggagggaatccagtgggaggccaaagacgaagaggaggaggaggaggaa
gctgcaggagaagaggaggatgaccacatggagttttgcagagtgtgcaaagatggagga
gagcttctgtgctgtgacacctgcccatcgtcctaccacatccactgcctcaacccgcct
ctgcctgaaatcccaaacggggagtggttgtgtcctcgctgcatgtgtcctcctcttaaa
gggaaagttcagaggatcctgcactggaggtggggagagcccccgctgccagctgagccc
cctgcaggccctgatggcaaacccaccgatccgctaaccaagcccccgctcaaaggccgc
ccagagagggagttctttgtgaagtgggccggcctttcgtactggcactgctcctgggcc
agtgaactgcagctagagctgtaccacaccgtcatgtatcggaactaccagaggaagaac
gacatggacgagccgccgccgtttgactacggctccggagaggaggagctcaacaacgag
aagaggaagagcaaagacccccagtacgctgtaatggaggagcgcttctaccgctacggc
atcaaaccggagtggatggttatccaccggatagtcaaccacagttttgataaggacggg
gatgtgcactacctgatcaagtggagagacctgccgtacgatcagtgcacctgggaggcg
gatgattttgacgtcccggattacgacattcacaaagctttctactgggatcacagagag
cagattttaggagaggaccaacgccctcttgtggtaagaaaaggaaggaaactaaaagag
gactacccaaaaagagaggtcccccctgatgcccctatcatagatccaaccattaagttc
gagcaccagccctggtacattaacgccaccgggggaacgctgcacccgtaccagctcgag
ggtctgaattggttgagattttcctgggctcaggggacagataccatcctggctgatgaa
atgggactagggaagacggtgcagacaatcgtttttctctactcactgtataaagagggt
cattctaaggggcctttcttggtgagcgcgccgctttccacgatcatcaactgggagagg
gagttcgagatgtgggctccggatttctacgtggtgacttacaccggagacaaagacagc
agggcaactatcagggaaaatgagttcacttttgaagacagtgcagtgaaatctggacgg
aaagtgtttcgaatgaagaaagacactccgatcaagttccacgttttgctgacgtcatac
gaactgatcaccatagatcaagccattctgggctccgtcacctgggcctgtctggttgta
gatgaggcccacagactgaaaaacaaccaatcaaagtttttcagaatcctcaacgggtac
aagatctactacaagctgctgctcaccggaacgcccctgcagaacaacctggaggagctc
ttccatctacttaacttyctcaccccagagcgcttcaacaacctggaaggcttcctggag
gagtttgcagatatctctaaagaggaccagataaagaagctccacgatcttctcgggcct
cacatgctcaggaggctgaaagctgacgtcttcaagaacatgccggcaaagactgagctc
atcgtcagagtggagctcagtcccatgcagaagaaatattacaagtttatcttaacacga
aactttgaggctctgaactccaaaggtggagggaatcaagtgtctctgctcaacatcatg
atggacctgaagaagtgctgcaaccacccttacctgttccccgtggctgcygtggaggct
ccagttttacccaatggttcttatgatggcaatctgctggtgaagtcctcaggaaaacta
acgttgcttcagaaaatgctgaagaagcttaaagatgaaggacacagagttcttattttc
tctcagatgacaaagatgctggatctgcttgaggattttctggaatttgaaggrtataaa
tatgaacggattgatggggggatcaccggaggcctacgacaagaagccatcgaccgattc
aacgccccaggtgcgcagcagttctgcttcttgctttcaacacgagccggaggtctcggc
atcaacctggccagcgcagacaccgtcatcatctacgactccgactggaacccccacaat
gacatccaagctttcagcagagcccaccgcatcggccagaacaagaaggtgatgatctac
cgcttcgtgactcggggctcggtggaggagaggatcactcaggtagcgaagagaaaaatg
atgctgactcacctggtggtgcggcccggcctgggctctaaaacgggctccatgtccaag
caagagctggacgacatcctcaagtttggaactgaggagcttttcaaggatgaaatggag
gcggcacggacaatgggcgacaacaaagatggcgaggagggcaatgtgattcactacgat
gatgatgccatttctaagctgctggaccggagccaggacgccactgaggacacagagatt
cagaacatgaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagaa
gacggagaggaggaggtggagcgagagatcatcaagcaggaggagaacgtggaccccgac
tactgggagaaactcctccgccatcactacgagcagcagcaggaggacctggctcgaaac
ctgggcaaaggcaaacgcatccggaagcaggtcaactacaacgatacgacccaggaggac
caagagtggcaggatgatctttcagacaatcagtcggagtactccgtggggtccgaggac
gaggacgaagatttcgaggagaggcctgaaggtggacgcagacagtcccgtcggcagctg
aagaatgagaaagacaaacctcttccacctttactggcacgggtcggagggagtatcgag
gtcctggggttcaacactcgccagaggaaagccttcctcaacgccatcatgcgctggggc
atgccccctcaggatgccttcaactcacactggctggttcgagacctcagggggaaaagt
gagcgggagttcagggcctacgtgtctctgtttatgagacatttatgtgagccaggtgcc
gacggagcagagacctttgctgatggagtgccccgcgagggcctttctcgtcagcacgtt
ctcaccaggataggagtcatgtcacttgtcaggaaaaaggtgcaggagtttgaacatgta
aacgggaagctgagctctccagatctgattcctattggaatggagctgaagaaactgact
gagagtgtgtcctctgatcccaacactcctgtgccagccagccctgtggccacgcagccc
agcacccccgtcccaccaggaacagagtctttcgtgggtaacgctgaggacaaggagagc
acagaacaagatggaaagaaatcttcagagcaggagcaggcttccagcgctgagccagcc
tctgcacctgacagcgaggagagcaaggccagctcggaggagaaaacagaagatgagagg
aacagaaccaagtcccccgccgccaaggccgagccgtgcgctcacccgaaagagcccacg
ttcaagcagacggagccgccgtccagtcacgcctcgccgaagacggacccctgcaaagaa
gtcgagaaaccctccgaaaaaggagacgccggctctccccgggagaaaagcgaagacaaa
gaaaataagccagatgatgtgaagagcgaggccgcgttagagggaagactgaatggagac
aaagacactttggatgagatggatgagagcagaaaggaggagaaaaatgggttcaaagcc
aagtttatgtttaatattgctgatggaggttttaccgagttgcacaccctctggcaaaca
gaggagcgagcggcgctgtcttctggaaaaatacatgacatctggcatcgtcgccatgac
tactggctgctggctggcatcgtaacacatggctacgctcgctggcaagacattcagaat
gacccccgttacgccattctcaacgagccgttcaaaactgagatacacaagggcaactac
ttagagatgaagaacaagttcctggcgcgccgctttaagctgttagagcaggctctggtg
atcgaggagcagctgcgacgggcagcctacctgaacatgacccaggaccccagtcacccg
gccatggctctcaacactcgcttcgctgaggtggagtgtttggcagagtcccaccaacac
ctgtccaaagagtctctggctgggaacaagcctgccaacgccgtgcttcacaaagtgctg
aaccagctggaggaacttctgagcgacatgaaagcagatgtgacccgactgcccaacatg
ctgtccagaatcccgccggtgtcggcccgtctgcagatgtccgagaggagcatcctgagc
cgcctcaccagccgaggcagcgagcctccrctgcagcagaccttcagccagggtgggttc
agctgcacgcagatgtacagcagcactttcggcgggggcttcagaggaccaggcggacag
cccatggtcaactacagtcagatgccccttggaccctacgtcagcgtgtcctccaacgcc
cccctgacccctacaagccatctggacaagaaatcacttgactctttgagagacgtggct
acgcccgaactcaaatcgggcaaatctagcgatgtcatctgtatcgaggactag
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integrated database retrieval system
