KEGG   Austrofundulus limnaeus (annual killifish): 106522907
Entry
106522907         CDS       T06063                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03271  Virion - Rotavirus
alim04145  Phagosome
alim04510  Focal adhesion
alim04512  ECM-receptor interaction
alim04514  Cell adhesion molecules
alim04530  Tight junction
alim04810  Regulation of actin cytoskeleton
alim04820  Cytoskeleton in muscle cells
alim05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    106522907
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106522907
   04514 Cell adhesion molecules
    106522907
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106522907
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106522907
   04530 Tight junction
    106522907
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106522907
   04810 Regulation of actin cytoskeleton
    106522907
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106522907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:alim04131]
    106522907
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alim04147]
    106522907
   04515 Cell adhesion molecules [BR:alim04515]
    106522907
   04090 CD molecules [BR:alim04090]
    106522907
Membrane trafficking [BR:alim04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    106522907
Exosome [BR:alim04147]
 Exosomal proteins
  Proteins found in most exosomes
   106522907
Cell adhesion molecules [BR:alim04515]
 Integrins
  Integrin beta subunits
   106522907
CD molecules [BR:alim04090]
 Proteins
  106522907
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 106522907
NCBI-ProteinID: XP_013871600
UniProt: A0A2I4BV18
LinkDB
Position
Unknown
AA seq 792 aa
MNLRFLFLAILSTVLGGGRAQQDVNVCTKANAQSCGECIQVSETCGWCSDEKFLSVGESK
SARCDVVNRLKERKCDPSKIENPRGRVVINEDKPVTGKKPADKIIQIQPQKLTLNLRNGE
PQTFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTDLMREMKKITSNFHIGFGSF
VEKTVMPYISTTPAKLINPCSSNQNCTSPFSYKNVLKLTDKGDEFNNLVSQQQISGNLDS
PEGGFDAIMQVAVCEEQIGWRDVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLENNM
YTMSHYYDYPSIAHLVQKLSEHNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLSSNSSNV
INLIIDAYNSLSSEVILENSKPPEGVSVSYKSICKNNVVGTGDDGRKCSNISIGDEVHFQ
ITVQSKNCTPNGNLETITIKPLGFKEDVVVALNFICDCECASKGIRNSPECDGGHGTLEC
GACKCNEGRIGQSCECSRDDVRTDDMDANCRKSNGTDDICSNNGECVCGTCICKKRENPA
EVYSGQFCECDNFNCDRSNNKLCGGHGRCECRVCICDENYTGSACDCSMDNSTCIAKNGQ
ICNGRGNCDCGTCKCTDTKFQGPTCELCPTCPGVCPEHKDCVQCLTFKTGEKKETCERDC
KNYKLTKVSERESLPSPTDEPPRAICKERDENDCWFYFTYSVKGDVKEVHVSEKLECPAG
PNIIPIVVGVVAGIVMIGLALLLIWKLLMIIHDRREFAKFEKEKMNAIWDTGENPIYKSA
VTTVVNPKYEGK
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgaacctacggtttctttttttagcgattttatccacagtccttggtggcggccgggca
cagcaagatgtgaacgtttgcaccaaggccaacgcgcagtcctgcggggagtgcatccag
gtgtctgaaacatgcgggtggtgctcagacgagaagttcctgtctgtgggtgagtccaag
tccgcccgctgtgacgtcgtgaaccgtctgaaggagagaaaatgtgacccgtctaaaata
gagaacccacgtggacgtgtygttattaatgaagacaaaccagtcactggtaaaaaacct
gctgacaaaatcatccagatccagcctcagaagctcaccctgaatctcagaaatggtgag
ccgcagacctttgacctgaagttcaagcgtgccgaggactaccccatcgatctgtactac
ctcatggacctctcctactccatgaaagacgacttggaaaacgtcaagaacctcggcact
gatctcatgagggaaatgaagaagatcacctcaaacttccacattggtttcggctccttc
gtggagaagacggtcatgccgtacatcagcaccacgccggccaagctgatcaacccctgc
tcgagcaaccagaactgcaccagccccttcagctacaagaacgtcctgaaactgaccgac
aaaggagacgagttcaacaatctggtcagtcagcagcagatctcaggaaaccttgactct
cctgagggcgggttcgacgccatcatgcaggtggcggtgtgtgaggagcaaatcggctgg
agggacgtgactcgtctgctcgtgttttccaccgacgctggttttcacttcgccggcgac
ggcaagctgggaggcatcgtcctgcccaacgacgggaagtgccacctggagaacaacatg
tacacaatgagccactactatgattacccctccatcgctcatctggtccagaaactgagt
gaacacaacatccagaccatcttcgctgtaactgaggagttccagcctgtttaccaggag
ctgaaaaatctgatccccaagtcggccgttggcacgctgtcctccaactccagcaacgtg
atcaatctcatcatcgacgcctacaactctttgtcgtctgaggtcatcctggagaacagc
aagcctccagaaggagtttctgtctcctacaagtccatctgtaagaacaacgtggtggga
accggagacgacggcaggaagtgctccaacatctccatcggagacgaggtgcatttccag
attacagtccagtccaagaactgtactccaaacggaaaccttgagaccatcaccatcaaa
cctctgggcttcaaagaggatgtggtggtggccctgaacttcatctgcgactgtgaatgc
gcttcgaagggaattcgcaacagccccgagtgcgacgggggtcacggcacyttagagtgc
ggggcctgcaagtgcaacgaaggacgcatcgggcagtcctgcgagtgcagcagggacgac
gtccggaccgacgacatggacgcaaactgccggaagtccaacggcacggacgacatctgc
agcaacaacggcgagtgcgtctgcggcacctgcatctgcaagaaacgcgagaaccccgcc
gaggtctacagcggccagttctgcgagtgcgacaacttyaactgcgaccgctccaacaac
aagctctgtggaggacacgggcggtgcgagtgcagggtgtgcatctgcgacgagaactac
acgggcagcgcctgcgactgctccatggacaactccacctgcatcgccaagaatgggcag
atctgcaacggccgggggaactgcgactgcggcacctgcaaatgcactgacaccaagttc
caagggccgacctgcgagctgtgtcccacctgcccaggtgtctgccccgagcacaaggac
tgcgttcagtgtttgaccttcaaaaccggtgagaagaaggagacgtgtgagcgcgactgc
aagaactacaagctgaccaaagtatcagagagggagagcctgcccagtcccaccgatgag
cccccccgagccatctgcaaggaaagggatgagaacgactgctggttctacttcacctac
tccgtcaagggtgacgtcaaggaggtccacgtgtcggagaagctcgagtgcccggccgga
cccaacatcatccccatcgtggtgggagtggtcgcgggcatcgtgatgatyggcctggcc
ctgctgctcatctggaagctgctcatgatcatccacgaccgcagggagttcgccaagttc
gagaaggagaagatgaacgccatctgggacacgggagagaatcccatctacaaaagcgcc
gtaacaactgtcgtcaaccccaaatacgagggcaagtga

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