Austrofundulus limnaeus (annual killifish): 106522927
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Entry
106522927 CDS
T06063
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106522927 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106522927 (ogg1)
Enzymes [BR:
alim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106522927 (ogg1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106522927 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
106522927
NCBI-ProteinID:
XP_013871633
UniProt:
A0A2I4BV85
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MVKHAVLSSGTKLWRSLACAKSELRLDLTLACGQSFRWKETAEGHWTGVMGGRVWTLTQT
DDTLWYYLYTKQNNQSGGDVSLQDNNKRADRRSKDDQRKDEEEPQAVSSQQDSEMEAEVM
LRDYFQLHVKLGDLYREWGEADPHFKKIADIFTGVRILRQDPTECLFSFICTSNNHISRI
QGMVERLCQALGTPLGQLDQTAYYDFPTLSSLADCSVEACLRDLGFGYRARFLQQSAKQI
LDSHGLQWLEGLRRVSYLEARDALRTLPGVGTKVADCVCLMCLDKPDAVPVDTHVWQIAQ
RDYKYAADKRQKSLTEKVHRDIGGFFRKLWGPYAGWAHSVLFCADLKKFQSLKEKACFNQ
LETEEEEEKCSKTEIKREFDGRGLNMMSENQKKAKMCVKEENTVR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacatgcggtgttgtcttcaggaacaaaactgtggagatctttggcttgtgca
aagtcagaactgcgcctggatctcactctagcctgcggacagtcttttcgctggaaagaa
accgcagaaggacactggactggagtgatgggaggaagagtgtggactctgactcaaacg
gacgacactctttggtactacctctacacaaagcagaacaatcagagtggaggtgatgtt
tcccttcaggacaacaacaaaagggctgacagaaggtctaaagatgatcagaggaaggat
gaggaggagccacaggctgttagtagccaacaggacagtgagatggaggcagaggtgatg
ctgagagactattttcagctgcacgtcaagctgggggatctgtacagagagtggggggaa
gcagatccacactttaagaagattgcagacattttcactggtgtacggattctgcgccag
gaccccactgaatgcttgttttccttcatctgcacatccaacaaccacatttcgcgtatt
cagggaatggtggagagattgtgtcaggctctgggcacgccacttggccagctggaccaa
accgcctactatgactttcctaccctctcttcactagcagactgcagtgtagaggcatgc
ctcagggacctcggctttggttatagagctcggttccttcagcagagtgcaaagcagatt
ctggactctcacgggctccagtggctcgaaggtttacgccgagtctcgtacctggaggcc
cgtgatgctcttcggactcttcctggtgttggcactaaggtggcagactgcgtatgtttg
atgtgtctggataagccagacgccgttcccgtggacacacacgtgtggcagattgctcaa
cgggactacaagtatgctgccgataaaagacaaaagagtcttacagaaaaagttcacaga
gatattggaggtttctttagaaaactttggggaccgtatgctggctgggcacattctgtg
ctattctgcgctgacctcaagaagtttcaaagcctcaaagaaaaggcctgttttaaccag
ctggagacagaggaagaagaggagaagtgcagtaagacagaaataaagagagaatttgat
ggacgtggactaaacatgatgtcagaaaatcagaaaaaggcaaagatgtgtgtcaaagaa
gagaacactgtaagataa
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