Austrofundulus limnaeus (annual killifish): 106523090
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Entry
106523090 CDS
T06063
Symbol
rbm39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106523090 (rbm39)
Spliceosome [BR:
alim03041
]
Common components
Common spliceosomal components
General mRNP proteins
106523090 (rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
106523090
NCBI-ProteinID:
XP_013871853
UniProt:
A0A2I4BVV0
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSSHANGHEEHSKKKRRSRSRSPGSKKKKSRSRSRDRKKS
KKRSKSKERKRSRSRERHRSRSRSKERSGRYKARNKSPIRKRSRSRSPFNKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSISFGGMATPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPTRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacgttgaggccatgctggaagctccatacagaaaggatgagaac
aagtcctctcatgcaaatggacacgaggaacacagcaagaagaaaaggaggagcaggagc
cggagtccaggctcaaagaagaagaagagcaggagccggagccgagacaggaagaagagt
aagaagaggagcaaaagcaaagaaagaaaacgcagccgcagcagagagcgccatcgcagc
cgctcccgaagcaaagaacgatcgggacgctacaaagcacgcaacaagagtccgatccgc
aaacgctccagaagtcgaagtccttttaacaaaaaggagaagagtcctgttaggcaacca
attgacaatctaacaccagaagagagggatgcccgcacagttttctgtatgcaacttgca
gcaagaatcagagctcgagatctggaggatttcttctcagctgttggaaaagtcagggac
gtgcgaatcatctctgacagaaattctcgaaggtcaaagggtattgcatacatcgagttt
gtagagtcgtcttctgtgccactggccatcggactgaccggccaaagacttctaggtgtg
ccgatcattgtccaggcctctcaggcagagaaaaatcgagctgcagctgcagccaacaat
ctgcagaagggcagtgccggcccgatgcgactgtatgtgggctcactgcacttcaacatt
actgaagaaatgctgcgagggatctttgagcctttcggaaagatcgaagggatccagctt
atgatggacagcgagactgggagatccaaaggttatggttttatatcttttgcagacgca
gaatgtgcaaagaaggctttagagcagctgaatggctttgagctggctggtcgtcctatg
aaggtggggcacgttacagagcgctctgactcatcaacagccagctcattcctggataac
gatgaactggagagaactggtattgacctcggcacaacagggcgcttacagcttatggct
cgactagcagaaggaactggcctgaagatccctcctgctgctcagcaggctctacagatg
accggctctatttcctttgggggtatggctactccagcagttccaacgccagctccaagc
caagcattgaacctcccttcacagccgctggccacacattgccttcaactgtccaacctc
ttcaacccccaagcagaaaatgatcctaactgggccagtgaaattcaagatgatgtgatt
gatgagtgcaacaaacacggaggagttgttcacatctatgttgacaagaactctcctcag
ggtaacgtgtacgtgaagtgtccctcaataccagctgcaatggcaactgtgaatgctctt
catggacggtggtttgcaggtaaaatgataacggctgcatatgttcctttaccgacctac
cacaaccttttcccagactcagtaacagcaaagcagctcctaatgcccacacgccgatag
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