Austrofundulus limnaeus (annual killifish): 106523505
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Entry
106523505 CDS
T06063
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03030
DNA replication
alim03420
Nucleotide excision repair
alim03430
Mismatch repair
alim03440
Homologous recombination
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106523505
03420 Nucleotide excision repair
106523505
03430 Mismatch repair
106523505
03440 Homologous recombination
106523505
03460 Fanconi anemia pathway
106523505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106523505
03032 DNA replication proteins [BR:
alim03032
]
106523505
03400 DNA repair and recombination proteins [BR:
alim03400
]
106523505
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106523505
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106523505
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106523505
MMR (mismatch excision repair)
106523505
DSBR (double strand breaks repair)
HR (homologous recombination)
106523505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Extensin_1
DUF223
SOG2
Motif
Other DBs
NCBI-GeneID:
106523505
NCBI-ProteinID:
XP_013872380
UniProt:
A0A2I4BXB0
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MTGVLTQGAXEALVKGSQIKNPVLQLLDIRSLDNGPNPPRFRVKMSDGQHFLSSFVLATQ
LNSLAEENLLVKNCLCTLKRTIINTLSDGRRVVVIMDMEILQSAEETGGTXGNPVSYSTD
AGMVSSTTAGPASSSSSAERPGPSFTNNSSNGKGFTGKATMKASPMKASPMKASPMKTSP
MKASPMKTSPMKASPMKTSPMKASPMKTSPMKASPMKTSPTKASPMKTSPSKASPMTPIA
NLNPYQSRWTIRARVTNKANIRTWSNSRGEGKLFSFEILDESGEIKITAFNKEVDKFFSL
VEQGKVYYISKATLKVANKXYSTLKHDYEITLHAHSSIIPCDEGDEIPTLHCDFVPIEEL
ENRDKDAIIDIIGVCKSAEDVSRVTTKTSREVSKRALSLIDMTGKEVTVTLWGEEAEKFD
GSGEPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQGGYALDSQSLTE
TRSTIRGSTMNWKMLGDXKNXQMGHGEKADYFSCVATVVYIRKESCLYQACPSSDCNKKV
IDQQNGLYRCEKCNREFPNFKYRLLLSANLADYWDNQWVTCFQETAEVLLGHSAEELGQL
RETDEAAFDQVFHKASFTTHIFKNRVKLETYNDESRVKVTVMEILPLDHREYSRRLLRSI
RSLAR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactggtgtactgacacaaggggccyttgaggcccttgtcaaaggctcacaaataaaa
aaccctgttctgcagcttctggatattcgtagtcttgataatggcccaaacccaccgagg
ttccgggttaagatgagtgatggtcagcacttcctttcctccttcgtyctggccacccag
ttaaacagtctggcagaagagaatctccttgtcaaaaactgtctgtgtacgctaaagcgc
accatcattaacactctgtcagatggcaggcgtgtggtcgttatcatggatatggagatc
ttgcagtcggcagaggaaactggaggaacgatkggaaatccagtttcatattctacagat
gcagggatggtgtcatcaaccacagctggaccagcatcatcttcttcgtctgctgagaga
cctggaccatcctttacgaacaacagcagcaatggaaaaggtttcacaggaaaagcaacg
atgaaggcctcgcccatgaaggcttctcccatgaaggcctcacccatgaagacctctccc
atgaaggcttcacccatgaagacctctcccatgaaggcttcacccatgaagacctctccc
atgaaggcttcacccatgaagacctctcccatgaaggcttcacccatgaagacctctccc
acyaaggcttcacccatgaagacctcaccctcgaaagcctcacccatgacacctattgct
aacctcaacccctaccagagcaggtggactatcagagccagagtcacaaacaaggctaat
atccgtacctggagtaactccagaggggagggcaagctcttctcctttgagatactggat
gaaagtggagaaatcaagattactgccttcaacaaagaagtggacaagtttttctctcta
gtggagcaaggcaaggtatactacatctcgaaggctacactgaaggtggccaacaaacyg
tactcaacattaaagcacgattatgagataacgctccacgctcattcatctataatacca
tgtgatgarggtgacgaaatccccacgttgcattgtgactttgtgcccattgaagaactg
gaaaaccgagacaaagatgccattattgatataattggagtgtgcaaaagtgccgaggat
gtttctcgtgtcaccactaaaaccagcagagaagtctctaagagggctctcagcctaata
gacatgactggcaaagaggtgacggtcacgctgtggggagaggaggcagagaagtttgac
gggtctggagagccggtcgttgccatcaaaggagctcgcctgtctgattttggaggcaga
tcgctttcagctttgttcagctcaacagtcatggtcaaccccgacatacccgaggctttt
agactccgggcgtggtatgatcaaggaggttatgcactcgacagccagtcgctaacagaa
accaggtcaaccattcgmggatcaacgatgaactggaaaatgctcggcgacyttaagaat
gkacaaatgggacatggagagaaggctgactacttcagctgcgtggcaacagtggtgtac
attcgaaaggaaagctgtctgtatcaggcgtgtccatcttcagactgcaacaagaaggtc
atagaccaacagaacggcttgtatcgctgtgaaaagtgtaaccgcgagttcccgaacttc
aaatacagacttttgctttctgccaacttagccgactactgggataaccagtgggtgacg
tgcttccaggagacagccgaggtcctgctgggtcacagtgcagaggagctgggacaactc
agagaaacagatgaggcagcattcgatcaagtcttccacaaagccagcttcacaactcac
atctttaaaaacagagtcaagctggagacgtacaacgatgagagtcgagtgaaggtaacg
gtcatggaaatccttcctttggaccacagagagtacagcaggagactcctgcgcagcatc
cggagcttggctcgctga
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integrated database retrieval system
