Austrofundulus limnaeus (annual killifish): 106523797
Help
Entry
106523797 CDS
T06063
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03250
Viral life cycle - HIV-1
alim04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106523797 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106523797 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106523797 (samhd1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106523797 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
HD_assoc_2
7TMR-HDED
PDEase_I
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
106523797
NCBI-ProteinID:
XP_013872808
UniProt:
A0A2I4BYH5
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MASRKRPIEPGSSPEEEFKTPEKKVSAVRLHSDFMGWGVEEACXYLRKEGLGEWESAFRA
QKITGIGLRYLTDADLEKIGIKCLGDRLRILHSLRKLWHIEAEPNKVFNDPIHGHVELHP
LLIKFIDTPQFQRLRNIKQLGGTYYVFPGASHNRFEHSIGVGYLAGKLVQALNERQPELL
ISHRDVLCVQIAGLCHDLGHGPFSHMFDGMFMPKARPSKSWKHETASLAMFDYLVEDNNL
KPVMEEHGLLLPQDLDFIKEQIAGPLNTNSGRGQEWPYKGRPADKSFLYEIVANKRNGID
VDKWDYFARDCYHLGIQNNFDYHRFLKFARVCEVDGQKQICTRDKEVGNLYDMFHTRNCL
HRRAYQHKVGNIIEHMITEAFLKADKHIQIEGSDGKMFTLSTAIDDMVAYTKLTDNVFEQ
ILNSSSPELEEARKILHNILRRNLYKCLGQTQPDKALKVTQELIHSWELEFAQTITQGIT
QGVKLQPEDFLVSVIVLDYGMKEKDPINNVRFYCKEDPTKAIQIRKNQVSKLLPEQFVEQ
LIRVYYKKKDEKCLEAAKKQFIQWCMNKNFTKPQDGDVIAPELTPLKANWHNNNEGEGSD
GKSKQTNCALVNGHVPAKTQLQF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgaaagcgaccgatagagccgggttcgagcccagaagaagagttcaaaacc
ccggagaagaaagtgtcggcggtccggctacactccgacttcatgggctggggagtggag
gaagcatgcamgtatctgcggaaggaaggtcttggtgaatgggagagtgcatttagagca
caaaaaataacagggattgggctgcggtatttgactgatgcagaccttgagaaaattggc
ataaagtgtctgggtgaccgtctgcggatcttgcacagcctcaggaagttgtggcacatt
gaagctgaaccaaacaaggtgttcaacgaccccatccacggccatgtggagctgcacccc
ctcctcatcaaattcatcgacacgcctcagtttcagagactgcgaaacatcaagcagctc
ggggggacgtactatgttttccctggagcgtcccacaatcgttttgaacacagcattggg
gttgggtacttggctggaaaacttgttcaagctctgaatgagcggcagccggaactgctc
atctctcatagggacgtcctgtgtgttcagatcgctggactctgtcatgacctgggacac
ggaccattctctcacatgtttgatggcatgtttatgcccaaagcacgtccatcgaagagc
tggaagcacgagaccgcctctctggccatgttcgactacctggtggaggacaacaatctg
aagccagtcatggaggagcacggcctgctgctgccccaggacctggacttcatcaaagag
cagattgctggacccctgaacactaattcaggtcgaggacaggagtggccgtacaaaggc
cgtcctgcagacaagtccttcctgtatgagattgtagccaacaaaaggaacggcatcgat
gtcgataagtgggactattttgccagggactgttaccatttaggtatccagaataatttt
gattatcatcgcttcctgaagtttgccagagtgtgtgaggttgatgggcagaagcagatc
tgcactagagacaaggaggtgggcaatctatatgacatgttccacacaagaaactgtctg
caccggagagcgtaccagcacaaagtgggcaacatcatcgagcacatgatcacagaggcc
tttttaaaagcagataaacacatccagattgaaggttctgatgggaagatgttcactctg
tccacagctatagatgatatggttgcctacaccaaactgacagataatgtgtttgaacaa
atcctaaactcctcatctccggagcttgaggaagcgaggaagatactgcacaacatactg
cgccgaaacctctacaagtgtctgggtcaaactcagcctgacaaggccttgaaagtcact
caggaattgattcacagttgggagttagagtttgctcaaaccatcactcagggcatcacc
caaggtgtcaagctgcagcctgaggactttttagtcagtgtaattgttttggattatggg
atgaaggaaaaggaccccatcaacaatgtgcgtttctactgcaaagaagacccaaccaaa
gccatccagatacgcaaaaaccaggtgtccaaactgcttccagagcagtttgttgagcag
ctgatccgggtttactacaagaagaaggatgaaaagtgtctggaggccgcgaagaagcag
ttcattcagtggtgcatgaataaaaacttcacaaagcctcaggatggagatgtgatcgcg
cctgagctgacgcctctgaaagccaactggcacaacaacaacgaaggggagggcagtgat
ggcaaatccaaacagactaactgtgctcttgttaatggacatgtgccagctaaaacgcag
cttcagttttag
DBGET
integrated database retrieval system
