Austrofundulus limnaeus (annual killifish): 106523799
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Entry
106523799 CDS
T06063
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106523799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106523799
Membrane trafficking [BR:
alim04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106523799
Protein recycling
Other Rab GTPase associated proteins
106523799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
FlgK_D1
Snapin_Pallidin
UPF0242
Motif
Other DBs
NCBI-GeneID:
106523799
NCBI-ProteinID:
XP_013872807
UniProt:
A0A2I4BYI9
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MISPGLEQRESSKMSTDKQRGIRVSQEELLCKNACGYYGNPAWKGFCSKCWRERSRPSGT
LRQDARPSGDGVPPTFSKFEEKKSIEKGSRYNTVRRLFWGSTSPPKPQESSESHTNLLKA
FQGLDPGDFPGFLKILRSPPSQRLQSRCTAFLNTMEAYHGLPIQKQSDLVQDFYQSFAEY
FRSFPEAQVTQIMEHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSV
PFPDENIPVTGDPFLPAITAIIEMDAKRAPQDKLACVSKCSQHIFEALSVLNDEPANADA
FLSSLVYVVLKANPPRLHSNMQYMIRFGLPHSLMAGESGYYFTNLSCAVAFIDKLNGPAL
SLSPEEFEGYMRGQRAPAALTKRQQVVGETQHLLEELQGRQEKLHQGVDALNVELQKWVQ
AVNSQLDEATTQFDEVQKDITAQSEEPSLAQDESQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatttcacccggtctcgaacagagggagagctctaaaatgtccacagataaacaaaga
gggatcagagtttctcaggaagagctgctttgcaagaacgcctgcgggtattacggaaac
cctgcatggaaaggattctgctcaaagtgctggagagagaggtcgcgtccgtccggaacc
ttgagacaagacgcaagaccgagtggtgatggagtgcctcccacattttccaaatttgag
gagaagaaaagcatagagaaaggtagccgttataacactgtgaggaggctgttctggggc
agcacatctcctcctaaacctcaagagtcctcagaaagccatacaaatctgttaaaagcc
tttcagggtcttgatcctggagacttccctggttttctaaagatcctgcggagtccacca
tcccagcgtttgcagtcccgttgcactgctttcctcaacacaatggaggcttaccatggt
ctgccaatacagaarcagtcggaccttgtgcaggatttctaccagtcttttgctgaatat
tttagaagttttcctgaagctcaggtcactcagataatggagcacgtagagaagctgata
atgacacggctgcacaaatgggtcttctgccatgacagctgcgatgatgaacagaaggac
ctggctcttcagcgacggatacgctccttaaactgggtcactccacagatgctgagcgtc
ccttttccagatgaaaacattccagtgacaggcgacccctttctgcctgctataacagcc
ataatagaaatggatgccaaacgtgcgcctcaggataagcttgcttgtgtgtccaaatgc
agtcagcacatctttgaagctctctcagtcctcaacgatgagcctgctaatgccgatgcc
ttcctgtcaagcctggtttatgtggtgctgaaggccaatccacctcgtcttcactccaac
atgcagtacatgattcgttttgggctgccccacagtctgatggctggagagagcggctac
tacttcacaaacttatcttgtgctgtggcctttattgacaagcttaacggaccagcactg
agcctcagtccagaagagtttgagggctacatgcgaggccaacgcgctcctgctgcgctg
accaagaggcagcaggtggtcggtgaaacccagcacctgttggaggaactgcaaggcagg
caagagaagctgcaccaaggagtggacgctctcaacgtcgagttacaaaagtgggttcaa
gcagttaattcacagctggacgaagcaacaacccagttcgatgaagtgcagaaagacata
acggcacaaagtgaggagccgtcattagctcaggatgaatcccagtga
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