Austrofundulus limnaeus (annual killifish): 106524050
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Entry
106524050 CDS
T06063
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106524050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106524050
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106524050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
106524050
NCBI-ProteinID:
XP_013873138
UniProt:
A0A2I4BZG1
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MLTTGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGXPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctaactacaggagcggctgtaactaacgtcacagccttggcccaggtagaccgggag
aagatttaccaatggatcaacgagttgtccagcccagaaaccagagaaaatgccctgctg
gagctaagcaagaaacgggaatcggtaccggacctggcgccgatgctctggcactccttc
ggcaccattgctgccctgctgcaggaaatagtgaacatctatccatctataaacccacca
accctcacagctcatcagtcgaacagagtgtgtaacgctctggctcttctgcagtgtgtc
gcctctcatccagaaacacggtcagcttttcttgcagcacacattcctctcttcctttat
cctttccttcacactgtgagcaaaacacgaccgtttgagtacctgcgtctcaccagcctg
ggagtcataggtgcattggtgaaaacagatgaacaggaagtgattaacttccttctaacg
actgaaatcatcccgttgtgtctgcgcatcatggaatcagggagcgaactctccaagacg
gttgctactttcatccttcagaagatcctgctggacgacaccggcctggcttacatctgt
cagacgtatgaacgtttctcccacgtggccatgattctcggtaaaatggtgctgcagctc
tccaaggagccgtcggctcgcctgctgaagcacgtcgtccgctgctacctgcgcctctcg
gataacctcagagccagagaggcgctgcgtcagtgtctccccgaccagctgaaggacagc
accttcgcccaggtgctgaaggacgacaccaccaccaagcgctggctcgcacagctggtg
aaaaacctgcaggagggccaggtgaccgacgccagaggcatrccactcgctccacagtga
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