Austrofundulus limnaeus (annual killifish): 106524802
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Entry
106524802 CDS
T06063
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04514
Cell adhesion molecule (CAM) interaction
alim04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106524802 (lrrc4b)
04517 IgSF CAM signaling
106524802 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106524802 (lrrc4b)
Cell adhesion molecules [BR:
alim04515
]
Immunoglobulin superfamily
NGL family
106524802 (lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
106524802
NCBI-ProteinID:
XP_013874230
UniProt:
A0A2I4C2L3
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
RLLLAGPESVGAASSSTSSSSCPSLCTCSNQASRVICTRQNLEEVPESISVNTRYLNLQE
NSIQVIKSDTFKYLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSHAFE
YLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDFISDAAFVGLINLRYLNLG
MCGLKDIPKLTPLVRLEELELSGNRLEIIRPGSFQGLVSLRKLWLMHSQVSVIERNAFDD
LKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCDVLWLSWWLKETVPSNTT
CCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTEGMAAELKCRTSTSTTSVN
WITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCMVTNAAGNTTATAVLNVTA
ADTSVNYTYFTTVTVESVEPGGGKEYPLVPFNESIPVQPGSTPSELWPYGVPTTDSSLPP
GWSSSSPHATRPTFTVPITDPGASGLDDVMKTTKIIIGCFVAITFMAAVMLVVFYKLRKQ
HQLHKHHGPARAIEIINVEDELGAGAGGRGSGISGGSTVTQGGGGGMNGGQSLRLHHPEI
VNLPNLARTEHLNHYYKTHHFNNNMLGLGMSTGVGLNNNPSPCSQSQNISCSQVSATTCG
VTPTCGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLFKNGSKENVQETQI
NT seq
2134 nt
NT seq
+upstream
nt +downstream
nt
gcggctcctcctcgccgggccggagtcggtgggcgctgcctcctcctccacctcctcctc
ctcctgcccttcgctctgcacgtgctccaaccaggccagccgagtcatctgcaccaggca
gaacctggaggaggtccccgagagcatatcagtcaacacgcgatacctcaacctgcagga
gaactccatacaggtcatcaagtccgacaccttcaagtatttgaggcaccttgaaatcct
ccagctgtccaagaatcagatacggcagatcgaggtcggagcgttcaatggcctccctaa
cctcaacacgctggagctgttcgacaaccggctcactctggtgccgtcacacgccttcga
gtacctcagcaagctgcgggagctctggctgcgcaacaaccccatcgagactctgccggg
ctatgccttccaccgcgtgccctcgctgcgacgcctggacctgggcgagctcaagaagtt
ggacttcatctcggacgcggccttcgtgggtctcatcaacctgcggtacctgaacctggg
catgtgtgggctgaaagacattccaaaactgacgccgctcgtgcgtttggaagagctgga
gctgtcggggaatcggctggagatcattcgtcccggatccttccagggactggtgtctct
ccggaagctgtggctgatgcactcgcaggtgtcggtcatcgagcgtaacgccttcgacga
cctgaaaagcctggaggagctcaatctgtcccacaactccctgcactccctgccccacga
cctgttcacgcccctgcaccagctggagagggtgcacctcaaccacaacccctgggtctg
caactgtgatgtgctctggctcagctggtggttgaaagagacggtgcccagcaacaccac
ctgctgcgcccgctgccacgctcctccggtcctgaagggcaagtacatcggagaactgga
ccagagccacttcacctgcttcgcgcccgtcatcgtggagccgcccactgacctgaatgt
caccgaaggcatggccgccgagctcaaatgtcgcacgagcacgtcgacgacmtctgtcaa
ctggatcacccccaacggcacgctcatgacccacgggtcttaccgtgtgcggatatccgt
cctgcacgacggcacgctcaacttcacaaacgtcaccctgcgagacacgggtcagtacac
ctgcatggtcaccaatgctgctggaaataccactgccactgccgtcctcaacgttactgc
tgctgacaccagtgtcaactacacctacttcacaacagttaccgtagagtctgtggaacc
cggaggaggaaaagagtacccattagtccccttcaacgagagcatccctgttcagcctgg
ctccaccccctctgagctgtggccctacggcgttcccaccacggactcctccctgcctcc
tggctggtcctcctcctctcctcatgcaactcgacccactttcactgtgccaatcaccga
tccgggcgcctcgggcctggacgacgtgatgaagaccaccaagatcatcatcggctgctt
cgtagccattaccttcatggcagcggtgatgctggtggtgttctacaagctgaggaagca
gcaccagctgcacaaacaccacggtccggctcgcgccatcgagatcatcaatgtggagga
tgagctcggtgccggggccggcggccggggcagcgggatctccggaggctccactgtcac
gcaaggcggaggcggcgggatgaacgggggtcagagcctcaggctgcaccatccggagat
cgtcaacttacccaacctggctcgaacggagcacctgaaccactactacaaaacccatca
cttcaacaacaacatgctgggcctgggaatgagcacgggcgtgggcctcaacaacaaccc
ctcgccctgctctcagtcacagaacatatcctgctcccaggtttcagctaccacctgtgg
ggtgacgcccacgtgtggcaccctgccctcccccgtgcccctgccccagctgggcctaca
cagctctctgaaaggcctaatgggcaagggccagaacgagccactactttttaagaacgg
ctcaaaggaaaatgtgcaagagactcaaatctaa
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