Austrofundulus limnaeus (annual killifish): 106524842
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Entry
106524842 CDS
T06063
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106524842 (zeb1)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
106524842 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-met
Homeodomain
zf-H2C2_5
zf-C2H2_6
zf-C2HC_2
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
106524842
NCBI-ProteinID:
XP_013874285
UniProt:
A0A2I4C2R8
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYNNVVEAGSDSDDEDKLHIVEEESSLVDGADCDSTLPD
DEHPSVHSWDPVKGDCASDGEDDLSADALVEEMLQQGDTAVIYPEAPDDDLQRQGTPDAS
VHDENGTPDSFSQLLTCPYCSRGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHLAVHKSGRDQRHITQSAGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISLISVNGRQRLGSSRNQSQGPSLNLPSLPSVHCSPIREKLEQ
SKPLQEQLPLNQIKTEPVDYEYKPAVMAPAVTAVGGGVFSGGAAAPLQGTVQAVVLPTVG
LVSPISINLADLQNALKVAVDGNVIRQVLENKGQVNSGLTTGNLHQTQQQLISAISLPIV
GQDGNAKIIINYSLDPNRGQFTAHNLKKEQMSPTQTAADMFKFQKLPEDLTVRGSRAHET
KEKEEKTTKTCLLCDNCPRGLEAFHALKHCKTDGVRLNGAGLDKSESAVAALLSDGGLCN
QPKNVLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLGAPTPPSE
EEDSCEAHTVVSLVPGKDTATINPSLSQDSPTEATPAEVNGTHISPASPTPLNLKDGGPI
QADTPQSTEGPLDLSLPKQAREEVEKGVPTAHIYPPASSSSNKVEEPLNLTCTKKDTSPL
SAIGGSPVALYASQSCAKPLDIVTTMQCLRALSTNNKQTILIPQLAYTYTTTANSPAGTE
MDETLHLNGIKEERQDMGSMDEQNDSDSGQARKKMKKTDSGMYACDLCDKIFQKSSSLLR
HKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNH
RYSYCKKETQSQAGGGESPEEDGEAPAEYQRPLATPPLLDSDERGSSTREDEESEEEEEE
EGVVDMNDIQVVQIGDEGGDEETEEQEEAERVLEDRGGQEEANTRQVF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggaccaacgtg
actaactacaacaatgtggtggaggctggttcagactcagacgatgaggacaagctgcac
attgtggaggaggagagcagcctggtggatggggccgactgcgacagcaccctgcctgac
gacgagcaccccagcgtgcacagctgggacccagtgaagggggattgtgcgtcagatgga
gaagacgacttgagtgcggacgccctggtggaggagatgctccaacagggagacacggcc
gtcatctatcccgaggctccagatgacgatctccagcgtcaaggcacccccgacgccagc
gtccacgatgagaacggaactcctgattcgttctcccagctgctcacatgcccrtactgt
tcacgaggctacaagcgctacagctccctgaaggagcacatcaagtaccgacacgagaag
acagaagagagcttcagctgtccggagtgcagctacagctttgcataccgcgcgcaactg
gagcgacatttggccgttcacaagagtgggcgagatcagaggcacatcacacagtctgca
ggcaaccggaagttcaagtgtactgaatgtggcaaagcatttaaatacaagcaccacctg
aaggagcacctgcgtattcacagtggagagaaaccatacgagtgctccaactgcaagaag
cgcttctcccactcaggctcgtacagctcccacatcagcagtaagaagtgcatcagtcta
atctccgttaacggcagacaacgcttagggagctccagaaaccagtcccagggtccatcg
ctgaatctgccctcgttaccttcagtccactgcagtccgatccgggagaaactggagcag
agcaaacccctgcaggaacagctgcccctcaaccagatcaagaccgaacctgtggactat
gagtacaagccagcagtgatggcacccgccgtcactgcagtgggtggtggggtgttcagt
gggggtgctgcagctcctctgcagggtacagtgcaggcggtggtcctgcccacagtgggg
ctggtctcacccatcagcatcaacctggccgacctgcagaatgctctcaaggttgcggtg
gacggtaatgtcatccgccaggtgctggaaaacaaaggccaggtgaactctgggttaacc
actggaaatctccaccaaacacagcaacagctcatctcagccatcagtctgccaatcgtg
ggtcaggacggaaacgcaaaaatcattataaactacagtctggatcctaaccggggccaa
tttacagcccacaatctgaagaaagagcaaatgtcaccaactcagactgctgctgacatg
ttcaagttccaaaaactccccgaggatctaactgtcagaggcagcagggctcacgagaca
aaagaaaaagaggaaaagaccactaaaacgtgtctcctgtgtgacaactgtcctagaggg
ttggaagcattccatgccctcaagcactgcaagacagatggtgtcaggctaaacggagca
ggcttggataaatctgagtctgccgttgctgccctgctgtcagatggaggactctgcaac
cagcctaagaacgtcttgtccctactcaaggcctactttgccttaaatgcagaaccaacc
aaggatgaactggccaaaatctctgactcggtgagtctgccaattcacgtggttaagaag
tggtttgacaaaatgcaagaaggtcagatatccctgggtgcgccaacacctccctcagaa
gaggaggactcctgtgaagctcacaccgttgtgtctcttgtcccaggaaaagacacagcc
actataaacccctctttgagccaggacagcccgacagaggccacaccagcggaggtcaat
ggcacccacatctctccagcctcccctacgccactaaaccttaaagatggtggtcccatc
caagctgataccccccagagcactgagggacccctggacttgtcgctgccaaagcaagct
agagaggaagtggaaaaaggggtgcctacagcccacatttaccccccagcttcctctagc
tctaacaaagtggaagaacccctgaacttaacttgcacaaagaaagacacatcaccactg
tcggccatagggggcagccccgtcgcactgtacgccagccagtcatgtgccaaacccctc
gacattgttaccacaatgcaatgtctaagagcactgtccaccaacaataaacagactatc
ctgatccctcagctggcttacacttataccactacagctaacagccctgcagggactgag
atggacgagaccctccacctcaatggaatcaaggaggagaggcaagacatgggctccatg
gatgagcagaacgactccgactccggccaggcgaggaagaaaatgaagaagaccgacagc
ggcatgtacgcctgcgacttgtgtgacaagatcttccagaagagcagctctctgctgaga
cacaaatacgaacacacagggaagcgacctcatgaatgcggcatctgcagtaaagctttc
aaacacaaacaccacctgatcgaacacatgcggctccactcgggggagaaaccgtaccag
tgcgacaagtgcggcaaacgcttctcccactccggctcctactcccagcacatgaaccat
cgctactcctactgcaaaaaggagacgcagagccaggcgggaggcggggagagccccgag
gaggacggcgaggccccggctgagtatcagaggccgcttgcaacgccccccttgctggac
tcagacgagcgagggagcagcaccagagaggacgaggagagcgaagaagaggaagaggag
gagggcgtggtggacatgaatgacatccaagtggtgcagataggagatgaggggggagac
gaggagacggaggagcaggaggaggcggagagagttttggaggacagaggaggacaggaa
gaggcgaacacgagacaggtgttctga
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