Austrofundulus limnaeus (annual killifish): 106524889
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Entry
106524889 CDS
T06063
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106524889 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106524889 (hbs1l)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106524889 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
106524889
NCBI-ProteinID:
XP_013874357
UniProt:
A0A2I4C2Z6
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCISPATANQFIYSRQERQAPKEEPLEEEED
EAGDIPMSPTVDHNFDPLDQAKLYSCLDYMRTVLGDAVPDSVLTQAAVRHGFDPQKALNS
VLSEDTKTALVTRSANEEIGRVSQEKRPLPERTKQETVAEKAKSRDVSHNKLDSEVVPKV
ARMTVTGKKQTMGFDVPGTGENGPVVPSVRRGGSPENAAAPESASKRPETPSKGPNVDEF
SASATPGRSSGKTRQAINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVN
KRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVVTLMDAPGH
KDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKM
DQVNWQQERFQEITSKLGHFLKQAGFKESDVFFVPTSGLSGENLTVRSSVAELRSWYSGA
SLLEQIDLFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGSVQTGDKILAMPPNET
CTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCHPKEPIRVCTRFKARILLF
NIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQ
RPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacagaaatgttcgaggttacaactacgacgaagattttgaagatgatgac
atgtatggacagtctgtggatgacgactactgtatatcaccagcaacggccaatcagttc
atctactcacgtcaagagagacaagcaccaaaagaggagcctttagaggaggaagaagat
gaagctggggatattcccatgtcccctactgttgaccacaactttgaccctcttgatcaa
gcaaagctttattcctgcctggactacatgcggaccgtgctgggggatgcggtgccagac
tcggtcctgacccaggcagctgtcaggcatgggtttgacccacagaaggcactgaattca
gtactatctgaagacaccaagacagccctggtcaccagaagtgcaaatgaagagattggc
agagttagtcaagagaagaggcctcttccagaaagaaccaaacaggagaccgtggctgag
aaagctaaaagcagagatgtgtctcacaataaactggattctgaagttgtacccaaagtg
gcccgcatgaccgttactggaaagaagcagacgatgggatttgacgttcctggcaccggg
gagaacggccccgtcgtcccttctgtgcgacgaggcggcagcccagaaaacgctgctgct
cccgagtccgcctcgaaacgtcccgagacaccatctaaaggaccaaacgtggacgagttc
tccgctagtgccacgccggggcgctcctctgggaaaacccggcaggcgatcaacatcaag
gcagaactagagaagagacaagggggaaaacctctgttaaatttggtagttataggtcat
gtggacgcaggtaagagcacgctgatgggccacctcctttatctgctgggtaatgtcaac
aagcgcaccatgcacaaatacgagcaggagtcaaaaaaggcgggaaaagcctcctttgcc
tatgcctgggttcttgatgaaactggcgaggagagggacagaggtgtgacaatggacgtt
ggcatgactaagtttgagacggactctaaggtggtgaccctgatggatgcaccgggccac
aaagacttcattcccaacatgataacgggcgctgcacaggcggatgtggcggtgctggtg
gtggacgccagcagaggagagtttgaggctggcttcgaggccggtggtcagaccagagag
cacgctctgctggtgcgttccctgggcgtcactcagttggctgtagctgtcaacaagatg
gaccaggtgaactggcaacaagagcgattccaagaaatcacttctaaactgggccatttc
ctaaagcaggcaggattcaaggagtcggatgttttctttgtccccaccagtggcctatcg
ggagaaaacctgactgtcaggagttcagtagcagaactcaggtcttggtacagtggagcc
agcctgctggagcagatcgatttattcaaagcccctcagaggtccatagacaaacccttc
agactgtgcgtctcagacgtgttcaaagaccagggctcaggcttctgtgttacagggaag
atcgaggcgggttctgttcagactggagacaaaatactggcaatgcccccgaatgaaact
tgcactgttaaaggaatcactctccatgatgaggctctggactgggctgcagcaggagat
catgtcagcctcactgtcaccggcatggacatcattaagataaacgtcggctgtgtgttc
tgccatccgaaagagccgattcgtgtctgtactcgatttaaagccagaattctcctcttc
aacattgaggttcccatcacacaaggctttcctgtgctgcttcattaccagacggtcagc
gagccggccaccatcagaaaactgatcagtgttctgcacaagagcagcggtgaggtcctt
aagaagaaaccaaagtgtttgagtaaaggtatgaatgccatcgtggagatccagacccag
aggccggtgtcgttagagctgtacaaggattacaaagagctgggccgcttcatgctgcga
tacgtgggctccaccatcgctgcaggggtcgtcacagagatcaaagaatga
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integrated database retrieval system
