Austrofundulus limnaeus (annual killifish): 106524922
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Entry
106524922 CDS
T06063
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106524922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106524922
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106524922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
106524922
NCBI-ProteinID:
XP_013874421
UniProt:
A0A2I4C344
LinkDB
All DBs
Position
Unknown
AA seq
2502 aa
AA seq
DB search
MAVVLLQALERTELNKLPKGVQNKLEKFVTELQNANEALKTQHERFKADSEQQYFDIEKR
LAESQEQILSATKDLQALKEENKKLKVLSTLKGTDNEAGEEKTPQQQTKTKYEIEAEKRE
LDRLLEKRTQEVENLTEDLKRLNEKLTETNKVKMELQLKLDEIQSSAASVEHREKRMEQE
KELLEKKIEYLTTELKTKTDEMLNTNREKGTEILELQGSLKSSNEQVASLESELSSLREI
SENQSKRAEDLNNKLKQAKDEQCAMEEKYRNELSAHIKLSSLYKGAATDMETKNQELSRA
VEELSKLVKETGEANKSLEKKVSAAEELKTRLEAELKEKIKKMEKELENATMKAAGKHCC
VPSMTEEQLDSMCPTAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDEI
VQEVESKAPVLKRQREEYESMQSSMASLCNKLEQARTEIYSLQKEKDEAKQRCESIEKNK
LRTERLLEDTSDQLCSVLVELEKARGNQVPKDDGSSADISSTSEVIGSSQLSFRSVSDLQ
RQNQTLLGRLRDLEEERDREQTHLTSARIKELESAVDKLQKEADQLREQRNQQKQLADSN
ARQRDMFKVLLTQSTGFSLPPQGQGAASPAPDRPSAPATRSTPQRATAAEWAQTAQTKAA
LKQLNDAFTLYKKEKAENDRMQNETIDRLQKQLTELRSGRAKLTSQLEFSNKRYEILQET
VSAYRREISALQERNQKMAATAQRHEHIIHTMSQDLRQTNEKLALEEVRVENLTKERDIL
KQAESRLGQEREAMLFEQHNQNLLLXNLKTIQLSMERTETXTRQRLNNKIEQLEKELTSM
KTRLQQEVAQKHALGRSMDAQLLEVQKQLENQTTLLQKTRELLRSSEQQVAALKAQSTSA
PSSEAAAASSSTATPATRAAGLRAPLSVRSPAPAASQQSSQSEQELSEIKGLLRRAEEQN
TELAEQLKSANASVEQYRSMVLTLEDSLKKEKELRSPLEVRLKESEEVQKQLEKKLLEGE
KMKQQAQEEGRKAVDAVEKQVCELQRSLKASQAEQQEALERSAAAVTQEQKAIQDSKYQT
KLAAEAQAKYERELMLHAADVEALQQLKKTSQQDAARKRELEEELKKTTALLQEKTTTWN
TIEKQLKEERSNLSRRCEELGRQNALLHQQMDEMATRSHQLQQQPHQNLDLSFSEEGKSX
EQILEILRFVRREKEISEAHYEASKGEALRYKQRVEHQDRELKELQEALNAERERMQVTA
KTLAEQQEQLKRLEMISSLQETNRMLKVDRDKLEQELQQAQAKVTKLQTDIGPLHNSLSI
LSEKNGSLQADKRLLEEDLKRLKARIQQLVSQQKDGDVEEKQKLTAEKEVNLKRIVQLSE
ESAKLKTELIRSNASSNSAQSQVQGLRESVSRITSERDALKKDLEAKNNDIVEKIKTINQ
VKKIGRRYKAQYDELKAQHDKLVSETAAKAGSEAAPNQEAQQELNKVQEELKKXQEELNT
LKEEMQKKREEAQKALQELEAAQKENQQTKEKLQEVQNQLTQNQNQLTQVQSQLSQTQTQ
LQQSQNQLTQSQKDLQQAKSQTQQVQNQLKSALSQAQARQNQIQQVQRDLHQAKDALQQN
LAKQKELQQTSQASQQSLSQEVKDLKTALSQAENKVTELQGKVDNLQETVAEREADNKRL
QEQLTEAKQAYEANQAAKANQSQSSQSTQASDAKAADDANQQDELTKLKQELSESRGREE
QLKQQMAEKEEKTKKAFLGAKLKISQVNKAKEQLSKENEELKQSKEELEDRMNALKSQFE
GKCLRLERELKELRETQVHSDQREDPPDQSGAKVGDQARSSDQRQISLKSPAQERGSSSV
SEPPTANIRPTQSTPSPSNKASTSTGSKATPRASIKPMVTPATVPIATPTATVMPTTQTE
SQEALVSASVHSTSSALVNTSTSMAQPTSTQATAFVQPTQQQAANQDAGSSMEAERPTTS
SSMTGAGSKRKVEEEEEESRPESSHTPPTTKKLRLKPTIALQMEGEEEMDGELRDMREQL
DSPDGSQELPEEGFPVLAEDLEEEGISQSVPSDQGSQVSAIIRDVIVIDTDSESPEDQKQ
EGEEEDEEEVEEEQFKEGGDEEHEDDAADSGMRGAEESNEESREAEEERDEGGPSDVTNT
EENVSGASSASQCSSEPTFSGEGSSGLMESEPPRDSIHLLPTCSSTQSPSSSSLTPRLPH
TRRLPHAVPPRLYIQAPAPELGPPHTQRQSSQLRRPSSGRGPQLTPGLAPMPFFDDDDRM
VPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLQQTPSSHSDLGQLASQGGL
GMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVLTESVPSDSCDNMASQSVPMVTASSG
MAAAADDGDEVFMEQEGDGPGTESSLESQADMESTVQQSDDAALPSTSQDPDTSSVILRH
TVTSQPLISSLSGRGSRGARLLSRRGTFPRGGRGGMGRGGFA
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgttttactccaggctttagagcggacggagttgaacaaacttccgaaaggc
gtccaaaacaagcttgagaagtttgtgactgagctgcagaatgctaatgaggcgctcaag
acacagcacgagcggttcaaagcagacagtgagcagcagtactttgacattgagaagaga
ctggcagaaagtcaggaacagatactttctgccacaaaagacctacaggccctgaaagaa
gaaaataagaaactcaaagtgctgagcaccctgaaaggaacagataacgaggccggtgaa
gaaaagacaccacaacagcaaaccaagactaagtatgagattgaagcagagaagagggag
ttggataggctgctggagaagagaacgcaggaagtggagaacctgacagaggatttgaag
cgtctgaacgagaaactgacagaaaccaacaaagtaaagatggagcttcagttaaaattg
gatgaaatccagtcatctgcagcttcagtagagcatcgagagaaacgcatggagcaggag
aaagaactgttggagaagaaaattgagtatttaaccacagagctgaaaaccaaaactgat
gaaatgttgaacaccaatcgagagaagggcacagagatactggaactgcagggcagcctg
aagagcagcaatgaacaggtggccagtctggaaagtgagctcagttctttgagggaaatc
agtgaaaaccagagcaaaagagctgaagacctcaataataaactaaaacaggcaaaagat
gagcagtgcgccatggaggagaaataccgcaatgagctcagtgctcacatcaagctgtcc
tcactctacaagggtgcagcgactgacatggagacaaagaaccaagaactgagcagagcc
gtggaggagctcagcaagctggttaaagaaacaggagaagccaataagtctttagagaag
aaggtgtctgcagctgaagagcttaaaacacggcttgaagcagaactaaaagagaaaata
aagaaaatggaaaaggagctggaaaatgctacaatgaaagctgcaggcaaacactgttgc
gttccgtctatgactgaagaacagctggactccatgtgtccaacagcrgctgccatcgct
gccatcgtcaagccgggcatgaagttctttgatctgtataatgcatatgctgagtgtcag
acacaactgcagcttgagaagcaggagaccaggagggtaagcagggtcctggatgagatc
gttcaggaggtggagtccaaggcgcctgttctgaagcgtcaaagagaggagtatgagagc
atgcagtcgtccatggcctccctgtgcaataaactggaacaggctcgaactgagatctac
agtttgcagaaggaraaggatgaggccaagcagcgctgtgaatccatcgagaagaacaaa
ctaagaactgagagacttctggaggatacatctgatcagttgtgctctgttctggttgag
ttggagaaagccagaggtaatcaggtgcctaaggacgacggcagctctgcagacatctcc
agcacttctgaggtcatcggctcaagccagctatcgttccgcagcgtgtccgatctccag
aggcagaaccaaactctgttaggaaggctgagggacctggaggaggagagggacagagag
cagacacacctaacatcagcacgcataaaggagctggagtctgctgtggataaactccag
aaggaggctgatcagctgcgggagcagaggaaccagcagaaacagctggcagactccaac
gccaggcagagrgacatgttcaaggtgctgctgacccagagcacaggcttcagtctgcca
cctcaaggtcaaggcgctgcttctcctgcacctgatcgtccttcagccccagctactcgc
tccactcctcagagagccacggctgcagagtgggctcagactgctcaaacaaaagctgct
ttgaaacaactcaatgatgccttcaccctgtataagaaggagaaggccgagaacgacagg
atgcagaatgagactatcgaccggctgcagaagcagctgactgagctacgctccggccgc
gccaagctaacctctcagctggagttcagtaacaagaggtatgagattcttcaagagact
gtgtcagcgtaccgcagagagatttctgcccttcaggagaggaaccaaaaaatggcrgca
acagctcaaagacacgagcacatcatccacactatgagccaggacctgaggcagactaat
gagaaactggctctagaagaggtgcgtgtagaaaacctgactaaagagagagacatatta
aaacaagctgagtctcggttaggtcaagaaagagaagccatgctgtttgaacaacataat
cagaacctgctgctaaygaacctcaagaccatacagttgtccatggagcgtacagaaact
gakactcgtcagcgacttaacaacaaaatagaacaactggaaaaagaactgacttcaatg
aagaccagactacaacaggaagttgctcagaaacatgcccttggacgctctatggatgca
caactgttagaagtacagaagcagctggagaaccaaaccacccttctgcagaagaccaga
gagctgctgcgtagctctgaacagcaggtagctgcgctgaaagctcagtccacttctgct
ccgtcctctgaggctgcagccgcctccagcagcaccgccaccccagctaccagagctgct
ggcctccgagcaccactgagtgtacgctctccagctccagcagcttctcagcagtccagc
cagtcggagcaggagctctcagagattaagggtctgcttcgacgtgccgaggaacagaac
actgaactggcagagcagctgaagagcgccaatgcctcagttgaacaatatcgatctatg
gtgctgactctggaagacagccttaaaaaagaaaaggagttgcgttctcctctagaggtc
agactgaaggagtcagaagaggtgcagaagcagctggagaagaagcttttagagggggag
aaaatgaagcagcaggcacaagaggaaggacggaaggctgtggatgcagtggagaaacaa
gtctgtgagctgcagcggagtctgaaggccagtcaggcagagcagcaggaggcactggag
aggtctgctgctgctgtcacacaggagcagaaagccatacaggacagcaagtatcagact
aagctagccgcagaggcacaagctaagtatgagcgtgagttgatgcttcacgcwgctgat
gtggaggctctgcagcagctaaagaaaacatcccagcaagacgcagctcgcaagagggag
ttggaggaagaactgaaaaagactactgctcttctgcaagagaaaaccacaacctggaac
acgattgagaaacagctgaaggaggaacggtccaatctgagtcgtcgctgcgaggagcta
gggaggcagaatgctctcctrcaccaacagatggatgaaatggccaccaggagtcaccag
ctgcagcagcagccgcaccagaatctggacctgtcattcagcgaggagggaaagagcrtg
gaacagatactggaaatactcaggtttgtacggcgagagaaggagatttctgaagctcat
tatgaagcatctaaaggagaagctctacgctacaaacagcgagtcgagcaccaagacaga
gaactgaaggagctacaggaagcactaaacgctgagagggaaaggatgcaagtgacagcg
aaaactttggctgagcagcaagaacagttgaagaggttggagatgataagttctctacaa
gaaaccaacaggatgctgaaggtggacagagataaactggaacaggagcttcagcaggct
caggctaaagtgacgaagctccagacagacatcggcccgctgcacaactctctgtctata
ctgtcagagaaaaatggctccctgcaggccgataagaggctrctggaagaagacctcaaa
cgactaaaggccagaatacaacaacttgttagccagcagaaagacggtgatgttgaggaa
aaacagaaactcacagcagaaaaagaggttaatctaaagcgcatagtacagctaagtgaa
gaatcagccaagctgaagactgagctgatcagatccaacgccagcagtaattcagctcag
tcccaagtgcaaggcctaagagaatctgtgtctcgcataacgtcagaaagagatgctctc
aaaaaagacctggaggccaaaaataaygacattgtggagaagatcaagaccatcaatcag
gtgaaaaagattggacgacgatacaaggctcagtacgatgagctcaaagcccagcatgac
aagctggtcagtgaaacagctgctaaagcaggaagtgaagcagcrccgaaccaggaagca
cagcaggagctgaacaaagtccaagaggagcttaaaaagwcccaagaggagctgaacaca
ttaaaagaagaaatgcagaaaaagcgggaagaggcccagaaggccctgcaggagctggag
gcagcccagaaggaaaaccagcaaaccaaagaaaagctccaagaagtccaaaaccagctg
acacagaaccagaaccagctgactcaggtccagtctcagttgtctcagacccagactcaa
ctgcagcagagtcagaaccaactgacccagagtcagaaggaccttcagcaggccaagagc
caaacccagcaggtacagaaccaattaaaatcagccctgagtcaagctcaggcccgtcag
aaccagattcagcaggtccagagggatcttcatcaggctaaagacgccctccaacagaac
cttgctaaacagaaggagctccaacaaacgagccaggccagccaacagagcctcagccag
gaagtcaaagatttaaaaaccgctctgagccaagctgaaaacaaagtgactgagcttcaa
ggcaaggtggacaacctgcaggagactgttgctgagcgtgaagcagacaataagcgtctc
caggagcagctaactgaagccaaacaggcttatgaagctaaccaagctgcaaaggccaac
cagagccagagttcccagtctacccaggcctctgatgctaaagctgccgatgatgctaac
cagcaagatgagctgaccaaactcaaacaggagctgtctgaaagcagaggccgagaggag
cagctcaaacagcagatggctgagaaagaggagaagacgaagaaggccttcctgggagcc
aaacttaaaatcagccaagttaacaaggctaaagagcagctcagcaaagagaacgaagaa
ctgaaacagagtaaggaggagctggaggacagaatgaatgcactcaagtctcagtttgaa
ggaaagtgtttacgtctggaaagagagctgaaagaactgagagagacgcaggtccactct
gaccaaagagaagatcctccggaccagagcggagccaaggtgggtgatcaggccaggtct
tcagaccaaagacagatttctttgaagagtcccgctcaagaaaggggaagctccagtgtc
tctgagcctcccactgccaacattagacccactcaaagtactccgtctcccagtaacaag
gcgagcacctccacaggcagcaaggccacacctcgtgccagtatcaagcctatggttacc
ccagctaccgttcccatagcgacccctacagcaacagtgatgccgaccacacagactgag
agtcaagaagcgcttgtaagtgcatctgtccactccaccagctccgctctcgtcaacact
tccacctccatggctcagccaaccagcactcaggccacagcttttgtccagcccactcag
cagcaggcagccaatcaggatgcaggatccagcatggaggcagagcggccaaccacatcc
tcctctatgactggagcaggttcaaagcgaaaggttgaggaggaggaggaagagagtaga
ccagagagttctcacacaccgccaaccactaaaaaactacgactaaagccgacaatagcc
ctgcagatggagggtgaagaggagatggatggagagctgagggacatgagagagcagctg
gattcacctgatggcagccaggagctcccagaggaaggttttccagtcttggctgaagac
ctggaggaagagggcatttcccagtctgtcccctctgatcagggctcccaggtctctgca
ataatccgagatgttattgtgattgacacggatagtgagagcccagaggaccagaagcag
gaaggtgaagaagaagatgaggaagaagtcgaagaagagcagttcaaggagggaggtgat
gaagaacatgaggatgatgctgctgacagcgggatgaggggagctgaggagagtaatgag
gagagcagagaagctgaagaggagagggatgaaggaggaccctcagatgtcaccaacact
gaggagaacgtgagcggagcgtcttcggcctcccagtgttcctctgagccaacattcagc
ggagaaggcagcagtggtctcatggagtctgaaccccccagagactccattcacctcctc
ccgacatgctcctctacacagtcgccgtcctcgtcctccctcacacctcgactgccacac
acacgcaggctgccgcatgctgtcccacctcggctctacatccaagctccagctcctgaa
ctgggacccccacacacacaaagacagtcctctcagctgcgwagaccctcttcaggacgt
ggacctcaactaacccctggattagccccaatgcctttttttgatgacgacgacaggatg
gttcccagtactcccactctggtggtccctcatcgcactgatggttttgctgaagcgata
cattctcctcaggtcgcaggtctgtccaccaggttcagatttggacctccagaagatttg
ctccaacaaacaccatcttcacactctgacctgggacagctggcctctcaaggaggtctg
ggaatgtatgagtctcctcttttcctggctgctcatgatgaagatggaggaggaagaagc
gtccctactacacctttacaagtggctgcaccagtgacggtcttgactgagtctgtgcct
tcagacagttgtgacaacatggcctcccagtcggttcccatggttactgcctcctctggg
atggctgctgcagcagatgatggagatgaagtcttcatggagcaagaaggagacggcccc
ggtactgaatcttctttggagagtcaggcagacatggagtcaacagttcagcaaagcgat
gatgcagcgcttccatccaccagccaagaccctgacaccagcagtgtgattctgcgccac
actgtgaccagtcagcctctgatcagcagcctgtcaggcagaggatccagaggagcccga
ctgctcagccgcagaggaacctttcctcgaggaggaagaggaggcatgggcagaggaggc
tttgcctaa
DBGET
integrated database retrieval system
