Austrofundulus limnaeus (annual killifish): 106524928
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Entry
106524928 CDS
T06063
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alim03037
]
106524928 (ift88)
Cilium and associated proteins [BR:
alim03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
106524928 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_7
TPR_14
TPR_19
TPR_11
TPR_16
TPR_9
TPR_CcmH_CycH
ANAPC3
TPR_10
TPR_17
TPR-S
DUF2225
ARM_TT21_4th
ARM_TT21_N
HEAT_Nup120
ARM_TT21_2nd
DUF6584
DUF4810
DUF7017
ARM_TT21_C
HAT_PRP39_C
Consortin_N
SPO22
HECW_N
Motif
Other DBs
NCBI-GeneID:
106524928
NCBI-ProteinID:
XP_013874431
UniProt:
A0A2I4C353
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MENVHLAVEEDDLYSGYNDFHPTFDSEDLDNDAGFQQAVRTSHGRRPPMTAKFPGTAIGV
RPLVSFGSRVPLVSSMGRPMTGAVQDGTSRPMTAVRAAGYTSSMTRGSNFDPLGQSRGPA
PPLEAKNEDTPEEKIKLLEKKVNDLIEESCMAQSTGNVQLALEKAKEAGRKERVLVRQRE
QSGHADHINLDLTYSVLLNLANQYENNEMYPEALNSYQVIVKNKMFSNAGRLKVNMGNIY
FKQKNYPKAIKFYRMALDQISNDHKDTRIKIMQNIGVVFVRLGQYSDAITSFEHIMSESP
NIKTGFNLILCYYAVGDRERMKKAFQKLISIHLGIDDEDKYIPSNDDTSLNLVIEAIKND
QLHQMERDVKVRAEKYIMTAAKLIAPVIETSFAVGFDWCVDMVKSSQYVELANDLEINKA
ITYLRQKNFNQVEAVETLKTFEKKDSRVKSAAATNLSCLYFLEKDYDQADRYADLAMNAD
RYNPAALINKGNTVYLKQDYEKAAEFYKEALRNDSSCTEGLYNLGLTYKKLDRLESALDC
FLKLHAILRNSDQVMYQLALLNEQMGDRQQAIEWLMQVISVTPTDPHALAKLGKLYSDEG
DKSQAFQYYSESYRYFPCIIEVIEWLGLYYIDTQFCEKAIQYFERAKLIQPTQVKWQLIV
ASCYRRSGNYQKSLETYKEIHHRFPENEECLQFLIKLCTSMDLKEVQEYATKLKKVEKMK
EIREQRVKSGRENSARGRREGREGSAGSVAAVSSSVLSCPKKPIVLESQPESKQFSPLSD
SERDSGGSSRGERLSAKMRSLPGSNEPYEASSPKQLDASYVDPLGPQMDRPKTGAKKRLD
DDDFADEELGDDLLPE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtgcacctggccgtagaggaggatgacctttactcgggttacaatgatttt
catccgacatttgactcggaggatctggacaatgatgcaggcttccagcaagctgttaga
acaagtcatgggagaaggcctccgatgactgcaaagtttccaggcactgctatcggagtt
cggcctttagtttcatttggatctcgtgtccctttggtctcctcaatgggcagaccaatg
actggagctgtgcaggatgggacaagtcgacctatgactgctgtcagagcagctggttac
acatcctccatgacacgtggttcaaactttgatcctttgggtcaatccaggggtcctgct
cctccactcgaagcaaagaacgaggacacgcctgaagagaagatcaagctccttgagaag
aaagtgaacgacctgatcgaagagagctgcatggcgcagagcacagggaacgtacagctg
gctcttgaaaaagctaaagaggcgggcaggaaggagcgagtcctggtcagacagagggaa
cagtctggacatgcagaccacatcaatttagacctcacctactctgtcttgctcaacctt
gccaaccagtatgagaacaatgaaatgtaccccgaggccctgaacagctaccaggttatt
gtcaagaacaagatgttcagtaatgcaggccgcctgaaagtcaacatgggcaacatctac
ttcaaacagaaaaactaccccaaagcaatcaagttctaccgcatggctctggatcagatc
tccaacgatcacaaggacacgaggatcaagatcatgcagaacatcggcgtggtctttgtc
cgcctgggccagtattcagacgccatcacgtccttcgagcacatcatgagtgagagtccc
aacataaagacgggcttcaacctgatcctgtgctactacgctgtcggagacagagagagg
atgaagaaggcctttcagaagctcatctctattcatctgggtattgatgatgaagacaag
tacatcccttctaatgatgacaccagcttgaatttggtgatcgaggccattaaaaacgac
cagcttcaccaaatggaaagagatgtgaaagtccgggcagagaagtacatcatgactgca
gccaagctcatcgctccggtcattgagacttcatttgctgttggatttgactggtgtgtt
gacatggtgaagagttctcagtatgttgagctcgccaatgatctggagatcaacaaagcc
atcacatacctcagacagaaaaacttcaaccaggttgaggctgtggaaacactgaagaca
tttgagaagaaggacagcagagtaaaaagtgctgcggccactaatctgtcttgtctctat
ttcctggagaaggactatgaccaggctgaccgatacgctgacctcgccatgaacgctgat
cgttacaaccctgcagctcttatcaacaagggaaacacagtgtatctcaaacaggattat
gaaaaggctgcagagttttacaaagaggctctraggaatgattcctcgtgcaccgagggg
ctctataacctgggtctgacctataaaaaactggaccgcctggagtcagccctggattgt
ttcctgaagcttcatgccatcctgaggaacagtgatcaagtcatgtaccagctggccctt
cttaacgagcaaatgggggatcgtcagcaggcaatcgagtggctgatgcaagtcatcagc
gtgactcccactgacccccacgctttggccaaactgggaaaactgtattctgatgaagga
gacaagtcccaggctttccagtactacagtgagtcctacaggtactttccctgcatcatt
gaagtgatcgagtggctcgggctttactacatcgacacacagttctgtgagaaggccatc
cagtactttgaaagagccaagctcattcaaccaacacaggtgaaatggcagctgatagta
gcaagctgttacagaagaagcggaaactatcagaaatccctggaaacgtataaagagatc
catcacaggtttccagaaaacgaggaatgtttgcagttcctgattaagctgtgcaccagc
atggatctgaaggaagtccaggagtatgccaccaagctgaagaaggtagagaagatgaag
gagatcagagagcagagggtgaagtcaggacgggagaacagcgcgagaggtcggcgagaa
ggcagagagggcagcgcagggagcgtcgccgccgtctcttcgtctgtcctcagctgtcct
aagaagcccatcgttttggaatctcagcctgagtctaaacagttcagtccgctgtcagac
tcagagagagacagtggcggcagcagcagaggggagcgtctgagcgccaagatgaggtca
cttcctggttctaacgagccctatgaagccagcagcccaaaacaacttgatgcgtcctat
gtggacccactggggcctcagatggacagaccaaagacgggtgcaaagaaacggctggat
gatgatgactttgcagatgaagagttgggagatgacctgctgccagagtag
DBGET
integrated database retrieval system
