Austrofundulus limnaeus (annual killifish): 106525197
Help
Entry
106525197 CDS
T06063
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106525197 (rfwd3)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106525197 (rfwd3)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106525197 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_THOC3
WD40_CDC20-Fz
zf-C3HC4
zf-C3HC4_2
EIF3I
WDR55
zf-rbx1
zf-ANAPC11
Beta-prop_WDR3_1st
Rtf2
zf-RING_11
Beta-prop_EML_2
Beta-prop_WDR75_1st
CFAP43_N
zf-RING_5
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_WDHD1_1st
zf-C3HC4_4
Beta-prop_WDR36-Utp21_1st
NSRP1_N
zf-Nse
Beta-prop_EIPR1
zf-RING_Vps41
Beta-prop_WDR36-Utp21_2nd
WD40_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
106525197
NCBI-ProteinID:
XP_013874793
UniProt:
A0A2I4C474
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MEAMEVDFPVQLRGGGVEQPEHVATAAGPAEEAAAPIHVSDSGSSTEVDEDEEADRDEGR
AAARTLLRLPATWAFSQRVAGGAAAAPSGAPGTPMRRRLRQGLRVHYPSQTAAPSRTFPD
FLLRAPAASVSQPQSGSTTEASESEDEEEGAAAAAAEPSAPAPPTAPTQPQETQHSGSAV
QSDKTEAQRQDSQPAPTPVQLPHGEDTEGDTCTICLEVWTTAGEHRLSALRCGHLFGYAC
IRQWLKTQGSAARCPQCNKKAKRSDIVLLYAPKLRALDNSEQESLKKSLEQEQSLRRKAE
LESAEYKLKLQVVTNKYGQAQHELQELRVLMAQTGRSSLPFTSSSSSSCSSFGSSQKVDG
FRTAQYSFSRAVLLSHAGGCRVLSYCEPLSCLLASQPSPQATLVPGCGVKKVSMVNMKAS
QYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNTGKPVWSCCWCLD
NTNYVYAGLSNGSVLLYDTRDTSTYIQELQPLRSRCPVASLCYVPRAASSSFPCGGLIAG
SLEGACFWEQVNETNYRPHILPLECAGCTDIQVETESRHCLVTYRPGRSNPSLRCVLMAL
TRSPQQDSIHLPTCSCSPVQTFTAGSSCKLLTKNSVFKSPDGNGTLVCAGDEASNSAMVW
DASSGSLLQKLSADLPVLDISPLSVNNEHFLASLTEKMLKLYRWE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtcgacttcccggtgcagctgcggggaggaggcgtggaacagccg
gagcatgttgctacagctgctggtccggctgaggaagctgctgcacccatacacgtctca
gactccggcagcagcacggaggtggacgaggatgaagaggctgaccgggatgaaggacga
gcagcagctcggactcttctcaggctccctgccacctgggcgttcagtcagagggtggca
ggcggagctgcagctgcaccctctggggctccggggacaccgatgagaagacgactcaga
cagggtctcagggtgcactaccccagccagaccgcagcaccttccagaactttcccagac
ttcctgctgcgggcccccgcggccagcgtctctcagccccagtctggcagcaccacagag
gccagcgagtccgaggatgaggaggaaggcgccgccgctgctgctgcagagcccagtgcg
cctgcaccacccactgcccccacccagccacaggaaacacagcattctggctcagctgtt
caaagcgacaagactgaagctcaaagacaggactcccagcctgctcctactccggtccag
ttgcctcacggtgaggacactgagggggacacctgcaccatttgtctggaggtgtggacg
acagcaggcgaacacagactctccgctctgcgctgcggacacctgtttggttacgcctgc
atccgccaatggctcaaaacccaaggctcagctgctaggtgtccacagtgcaacaagaag
gccaagcggtcagacatcgtgctgctgtacgcccccaagctgagagctctggacaactct
gagcaggagagcttaaagaaatctctggagcaggagcagtctctgaggaggaaggctgag
ctggagtcagctgagtacaaactcaaactgcaggtcgtcaccaacaaatacggacaggca
cagcatgagctgcaggagctgagggtcttgatggcccagacaggccggagttcacttccc
ttcacctcctcttcctcgtcaagctgcagctccttcggctcgtctcagaaggtggacggc
ttcaggacggcccagtacagcttctccagggcggtgctactgtctcacgctggaggctgc
agggttttgtcctactgtgagcctctgagctgcctgctggcctcccagccctcccctcag
gccacgctggtgcccggttgtggggtgaagaaggtgagcatggtgaacatgaaagccagt
cagtacgttcccatccacagtaaacagatccgaggcttgtccttcaacagacagaacgac
agcctgctcctgtctgctgcactggacaacaccatcaagctgaccagtctgctgaccaac
acggtggttcagacgtataacacaggtaaaccagtgtggagctgctgctggtgtctggac
aacactaactacgtctatgccggtctgagtaacggctcggtgctcctctacgacaccaga
gacaccagcacatacatccaggagctccagccgctgcgctccaggtgtcccgtagcgtct
ctctgctacgtgccacgagcagcgtccagctctttcccctgcgggggtctaatcgccggc
tctctggagggggcctgcttctgggagcaggtgaacgagaccaactacagaccacatatt
ctgccgctggagtgcgccggctgcaccgacatccaggtggagacggagagcagacactgt
ctggtcacatacagaccaggacgctccaacccgtccctgcgctgcgtcctgatggccctg
actcgatcccctcagcaggactccatccacctgccaacctgctcctgctcacccgtgcag
actttcaccgccggctcgtcctgtaagttgctcaccaagaactctgtcttcaagagtccg
gatgggaacgggaccctggtctgtgccggggatgaggcgtccaactccgccatggtgtgg
gacgccagcagtggctccctgctgcagaagctttcagctgacctcccggtgttggacatc
agccccttatctgtgaacaacgagcacttcctggcctctctgacagagaagatgctgaag
ctctacaggtgggaatga
DBGET
integrated database retrieval system
