Austrofundulus limnaeus (annual killifish): 106525403
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Entry
106525403 CDS
T06063
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106525403 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106525403 (trpv1)
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106525403 (trpv1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
YVC1_C
Ank_4
Motif
Other DBs
NCBI-GeneID:
106525403
NCBI-ProteinID:
XP_013875086
UniProt:
A0A2I4C515
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MDKCEMFGGFELEADDRTEEERSRQRGTKGDGLAPKAPMDTDYQEEIEEPKCKIRFNLGF
DKGIRGEQPAEHRDDSAFTIERLFEAAASRDVQKLDGLYDYLHRNMKKLSDSLYQSYGKT
ALMKALLHLRDGKNETVDVLIDISERLGDIQKFVNAAFTNSYYKGQTALHIAIERRSLSY
VKLLISKGADVHARACGKFFQPHDGPYFYFGELPLSLAACTNQPDIVEYLMVNEYQQADP
KLVDSQGNTVLHALVMVAVDKTKKSKENTAFIAAIYDQILKITNRLHPKLKLEDVENHKG
LTPLKLAARTGKTELFSYILKREFQENHTKHLSRKFTEWVYGPVHCSLYDLASVDSYEDN
SVLEILIYGSDIPNRHKMLETELLSRLLEDKWKRFAGRMFLLNFLLYLLYLIVFTLVSYN
KKNRVPPFVIENTIEDCLYVSGQMLTTLANLYFFFIGFVDMKRKRPKMKTLLVDGYYEIL
FFVQGFLFLVSVGLYLSGRQEYLGFLVVCLALSWVNMLYYSRGYEHMGIYSVMIQKMILS
DILRFIFVYIVFLFGFSAAVVTLLIEPPVVKNTTGKSRTLFTTTAPNEDCVKPTFRNISY
TILELFKFTIGMGDMEFAQDYQYGEVFYVLLIGYIILTYILLLNMLIALMNRTVENITKE
SASIWKLQRAVTILDMEKRLPCCLKKGLRCGVKKNLNTALGTDSRWCFRVEEKNWDKWNT
NLSKINEDPGCCDGIPQSDSETSPRRKNRGRSLRGLFKDSNRWRNTSESTEMRHLY
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtgcgagatgttcggaggcttcgagctggaggcagaygacagaacagaggag
gagaggtcccggcaaagaggtacaaagggggacggtttggcccccaaggctcctatggac
acggactaccaggaggagatagaggaacccaaatgcaaaatccgattcaatctgggattt
gacaaagggattcgaggtgaacagccggcggaacacagagatgactctgcttttaccatc
gaacggttatttgaagctgcggcaagtagggacgtccaaaaactggatggcctttatgac
tacttgcatcgaaacatgaagaaactctcagactctctgtatcagtcctacggcaaaact
gccctgatgaaagctctgctgcacctcagagacggcaagaacgagaccgtagacgtgctc
atcgacatttcagagaggctgggcgacatccagaagtttgtgaacgcagcttttaccaac
agctactataaaggtcagacagctctacatatagccattgagagaaggagtttatcctac
gtgaagctgctgatcagtaaaggagcagacgttcatgccagagcctgcggaaagttcttt
cagccacacgatggcccttacttctactttggcgagttgcccctgtctctagcagcctgc
acaaaccagcctgacatcgtggagtacctgatggtgaacgagtaccagcaggcagacccc
aagctggtggactctcagggcaacacggtgctgcacgccctggtgatggtggcagtcgac
aagacaaagaaatcgaaggagaacacagcatttatcgccgccatatatgaccagatcctc
aagatcaccaacagactgcaccccaagctgaagctggaggatgtcgagaaccacaaagga
ctgactcctctcaagctggccgcaaggaccggcaagactgagctcttctcgtacatcctg
aaaagggaattccaggagaatcacaccaaacatctgtcccgtaagttcactgagtgggtg
tatggacctgtccactgctccctgtatgacctggcctcggtcgactcgtacgaggacaac
tctgtcttggagattctgatctacggcagtgacattcctaatcgtcacaagatgctggag
acagagctgctgagccgactgctggaggacaagtggaagaggtttgcaggtcgaatgttc
ctcctcaacttcctgctttaccttctgtacctgatcgtcttcactcttgtgtcctataat
aagaagaacagggtgccaccgtttgtcattgagaacactatcgaggattgcctgtatgtt
tcaggccagatgctgacaactttagcaaacttgtatttcttttttattgggtttgtagac
atgaagaggaaacgaccaaagatgaaaacgctgctggttgatggatactatgagattctc
ttttttgtgcagggcttcctgttcctggtctcagtagggctgtatctgtcggggcggcag
gagtacctcggcttcttggtggtgtgtcttgctctcagctgggtgaacatgctgtactac
tccaggggttacgaacacatgggcatctacagtgtcatgatacagaagatgattctcagt
gacatcctgcgatttatttttgtctacatcgtcttcctctttggattctcagcagcggtg
gtgacgctgctcatagagcctcctgtggtgaaaaatactacagggaagtcgagaacttta
ttcaccaccactgcacctaatgaggactgcgtcaaacccaccttcagaaacatctcctac
acgatcctggagctcttcaagttcaccataggcatgggcgacatggagtttgcccaggat
taccagtatggagaggtcttctatgtgcttctcatcggatacatcatccttacctacatc
ctgctgctcaacatgctcatcgccctcatgaaccgcactgtggaaaacatcacaaaagag
agtgccagcatctggaagctgcagagggcagtcaccatcctggacatggagaaaaggttg
ccctgctgtctgaagaaggggcttcgctgcggagtgaagaaaaatctgaacactgctctc
ggaactgacagccgctggtgtttcagagtggaggagaaaaactgggacaaatggaacacc
aatctgtccaaaatcaacgaggacccgggctgctgygacgggatcccgcagtccgactcc
gaaacctctcccaggagaaaaaaccgagggaggagcctgagagggctgttcaaggacagc
aataggtggaggaacacatctgagtccacagagatgagacacctgtattaa
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