Austrofundulus limnaeus (annual killifish): 106525479
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Entry
106525479 CDS
T06063
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106525479
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106525479
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106525479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
YfhE
Motif
Other DBs
NCBI-GeneID:
106525479
NCBI-ProteinID:
XP_013875190
UniProt:
A0A2I4C5C8
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MMELQTEANSGQGVCQKGCGLPLLSAEEHRCVEALRARAAALEERGAAVERTARVERLRW
RRTERTLLAQVKTLQHEAHLAALQYQRRLEQYLLNINSITRQIVGYQRDFRAADMQNQGS
DETFPEGELQETAEAPGVNGKELSKSSHEETVEAFRSAKDPVVVQVIRRTPSGRPHGPLQ
EIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYYDGTNYL
SPIPADGERTEDFEYEEIELCRLSSQEKLGLTLCYRTDEEEDVAIYVSEVCPNSIAARDG
RIREGDRILQINGQDVQDREEAMAVLSSDDCRNIILLVARPEMQLEEAWLDDEHSEFLEQ
LKMEMLEEQQREEMELAALQEEQEKQQREDDDRPTCSTLPCYKDSMRSLKDRMESSDHNV
LAQIQRRLSRCLRDSQDTHCSTSTTRLEDKTDEDNDETEGDRFQQLLELKCQIRNSGEYD
LFYSRRSTIECNMGEQSDVQHELRMLNEELRSIELECQNIMQAHKLRKGQQSPLTGRSAP
SVKNQSPNRGESMTGKLVDINERLEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQRVV
SLTNQRNLCSSLAAGHSLSTSPIPACRAPVPGKGSSPDHSNPSETEQTPQAENESNGKLN
QCTSRIPYFSPSHSSQQRQANIPAHARHYQSYMQLIQQHSAVEYAQSQLSLLSVCKEPQR
PINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMSEMKMGR
YWSKEERKQHLVRAKEQKRRREFMQRSRLESLKENPQSSSEGRKEVSIIELSHKKMLKKR
NKKILDNWMTIQELMTHGTKAPEGAKAHNAFLSVTTV
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgcagacagaagcgaactcgggtcagggagtctgtcagaagggatgcggt
ttgccgctgctgtccgccgaggagcaccgctgtgtggaggcgctccgggcgcgcgcagcc
gcgctggaggagaggggcgctgctgtggagcgcacagcccgcgtggagcggctcaggtgg
aggaggaccgagaggaccctgctagctcaggtgaaaacgcttcagcacgaggctcatctc
gctgccctccagtaccagaggagactggaacagtatttactgaacatcaacagcatcacg
agacagattgttggctaccagagggacttcagagctgctgacatgcagaaccagggatca
gatgaaacattccctgaaggagagctgcaggaaacagctgaagcacctggggtaaatggg
aaggagttgtccaaatccagccatgaggagactgtggaggcttttcgatctgccaaagac
cccgtcgtggtgcaggtcatcagacgtacccccagcggccgcccccacggtcctcttcag
gaaatccacgtggtggacgtgtgcactcagactgacatcaccttcgaacacatcatggcg
ctggcaaagctccggccttccacccctcctgtgcctgacgtctgtcccttcctactctct
gatagctgtcactctcttcatacaatggaccaagattactacgatggtaccaactacctc
tcccccattcctgccgatggagagaggacagaagactttgaatatgaggaaattgaactg
tgtcgactcagcagtcaagagaaattagggctcactttgtgctatcggacagatgaagaa
gaggacgtggccatctacgttagtgaggtctgtccaaacagcatcgctgccagagatgga
cgcattcgagaaggggatcgcattttacagattaatggccaagatgtccaagacagagaa
gaagcaatggctgtgctgtccagtgatgactgtaggaacatcatactactggttgcaaga
cccgagatgcagttggaggaggcctggctagacgatgagcatagtgagttcctggagcag
ctaaagatggaaatgctggaggagcagcagagagaggagatggagttagctgccttacaa
gaggagcaggagaagcagcagagagaagacgatgacaggcccacctgttcaacccttcct
tgctataaggacagtatgcgaagtctaaaagacagaatggaaagctcagaccataatgtc
ttggcccaaatccagagacgcctttctcggtgcctgagagacagtcaggacacacactgt
agcactagtaccactcggctggaagacaaaacagacgaggacaatgatgagacagaggga
gatcgcttccagcagctattggagctaaagtgtcagatccgtaacagtggtgagtatgac
ctgttctacagtcgccgcagcaccatcgagtgtaacatgggggagcagagtgacgtgcaa
cacgaactacggatgctcaacgaggagctgcgcagcatcgagcttgagtgtcagaacatc
atgcaagcccataagcttcggaagggtcagcagtctcctttaactggacgctctgctccc
tctgtcaaaaatcaaagccccaaccgtggggagtccatgacaggtaaactggtagacatt
aatgagaggctggagaaatctgacaaggacagttccagtgcctacaacactgcagagagt
tcacggagcaccccattggcaatggaccgctccccagagcactcgctccaaagagtggtg
agtctcaccaaccagaggaacctctgcagcagtcttgctgccggtcactctctgagcaca
agccccatcccagcctgccgtgccccagtcccaggaaaaggcagcagccctgaccacagc
aatccctccgaaacagaacaaactcctcaggctgagaatgaaagcaatggcaaattaaac
cagtgcacttcccgcattccttacttctccccttcccacagttcccagcagaggcaggct
aacatcccagctcacgcccgccactatcagagctacatgcagctgatccagcagcactca
gctgtggagtacgctcagagccagctcagcctgctcagcgtctgcaaagagcctcagaga
cccatcaacgagccaaagatggagtggaaggtgaagatccgcagcgacggcacccgctac
atcaccaagaggcccgtgcgagacaagatcctgagggagcgagccttaaagattaaagag
gagcgaagtgggggaatgaccacggatgatgacgcaatgagtgaaatgaagatgggaagg
tactggagtaaagaggagaggaaacagcacctggtcagggcaaaagaacagaagcggagg
agagagttcatgcagcgcagtcggctggaaagtttgaaggagaaccctcaaagcagcagc
gagggtcgcaaggaagtcagcatcatagagctcagccacaagaagatgttaaagaaacgc
aataagaagatcttggataactggatgacaattcaggagctgatgactcatggtactaaa
gccccagagggagcaaaggcacacaatgccttcctttcagtcactactgtataa
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