Austrofundulus limnaeus (annual killifish): 106525480
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Entry
106525480 CDS
T06063
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106525480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106525480
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
alim00537
]
106525480
Cell adhesion molecules [BR:
alim04515
]
Immunoglobulin superfamily
Contactins
106525480
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
alim00537
]
Others
106525480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_4
V-set_CD47
C2-set_2
fn3_2
Motif
Other DBs
NCBI-GeneID:
106525480
NCBI-ProteinID:
XP_013875193
UniProt:
A0A2I4C5C5
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MLRLLLLLHLLVLSLSPAGASVHEEVPDLGEDEVIGFGPEFEDQPVDTIYPEESPEAKIT
MSCRARANPPATYKWKLNNVDIDLNDEGSHYSLSGGNLVISNPIRTEHVGNYSCLATNMF
GTVVSRKASVQFGYLDFFSLEERETVYVKEGQGAVLLCAPPPHHPGGLSFRWMLNDFPSF
ISLDKRRFVSQITGNLYISKVDPSDRGNYSCMVSSPSSSKSVFSNYIPLKLVAERHNRKY
PADLRVKFPDTTALVGQNITLECFALGNPVPDIHWRRIGGEMPYNMEVRMAGAQLYLYNV
QFDNSGTYRCEAINSKGKDFHSANVSVQAFPVWVEHISSTEKDIYSSFTMSCIAKGEPKP
QIRWLKNGEPIDKKEMRFSRLTYDDAGMYQCIAENRHGVIYANAELKVIARAPTFERRPV
KNVLAPKNGRVVIECRPKAAPKPTFYWSKDTELLFNSTRVFIWLDGSLEILNVTQADEGR
YTCFAENHLGKANSTRPLLVTESTKITLAPSNADANVGDDTWMQCAASHDQLVDITFVWS
LDGREIDLHKDSAHFESVLNGSSNSKLLIKNVQLKHAGHYTCIAKTQVDNITASAHLVVR
GPPGPPGGVRIINKTDKSVTLQWSRGADHHSPVSKYTIQYRDQFSKDEWKIATTSPANVE
GNTETATVVDLFPWTEYEFRVIATNTLGTGDPSRPSSKEKTQESVPVVAPSDVGGGGGAS
RELTITWTPVQPPYYFGTNFGYIVAFKPHGELEWKRVTVTDPEAKHYVHKDPNIAPLTQF
EVKVKAFNSQGEGPYSLTAIIYSAKDAPSEAPANVDVRLLSATMATISWNHLPQNSTDGY
QIKFWRDHEDGEGGAQRVGVLATENQTKLDGLRPNSEYLIEVRGYNSAGYGPPSKRIRIH
TKKPPPDRPPKILGTKLKGQFVNIAWEQVEPLTNESSIEGYKVLFKPKGSGGPTLYTTNK
QYIELRLPADGEYLVEVRAHTEGGDGAVAQISIKGGGIIPTVSLRVPSLLLVVLLLLNI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcctcctcctgctcctccatctcctcgtcctttctctctcaccggcaggtgca
tcagtccatgaggaggtgcctgaccttggtgaagatgaagtcataggatttggtccggag
tttgaggaccaaccggtggacaccatctaccccgaggagtcacccgaggccaaaattacc
atgagctgccgagccagagccaatccacctgccacatacaaatggaaactgaacaatgta
gacattgacttgaatgatgaggggagccactacagtttatcaggaggcaacttggtcatc
agcaaccccataagaaccgaacacgtgggaaactactcttgtctggccaccaacatgttt
ggcacagtcgtcagcagaaaagcatctgtccagtttggataccttgattttttctcattg
gaggagagggagacagtgtatgtcaaggagggccagggggcagtcctgctatgtgcaccc
cctccacaccatccaggaggattgtcatttcgatggatgctcaatgatttccccagcttc
atctctctggacaagcggcgatttgtctcccagataacaggcaacctgtacatctccaag
gtggacccatcagacaggggcaactactcctgcatggtatccagcccatccagttccaag
agtgtgttttccaactacattcccctgaagcttgtggctgaacgtcacaacagaaaatac
ccagctgacctaagagttaagtttccagacaccactgctttggtgggacagaatatcacc
ttggaatgctttgctttggggaaccctgtacctgatattcactggaggagaattggcgga
gagatgccgtacaacatggaggtgcggatggcaggtgctcagctttacctctataatgtc
cagttcgataacagtggcacgtatagatgtgaagccatcaactcaaaaggaaaagacttc
cactctgcaaatgtgtctgttcaggcctttcctgtgtgggtggagcacattagtagcaca
gagaaagacatctatagcagcttcaccatgtcatgcatagccaaaggtgaaccaaaacct
caaatccgctggctgaaaaatggagaaccgattgataagaaagaaatgaggttcagcagg
ctgacgtatgatgatgcagggatgtaccagtgcattgcagagaatcgccacggagttatt
tatgccaacgcagagctgaaagtgattgcacgtgctcctacatttgaacgccgcccagtg
aaaaacgtcctggcgcccaaaaatggccgtgttgtgatcgagtgtcgaccgaaagcagct
ccgaagccaaccttctactggagcaaagacacagagctgctgttcaactccaccagagta
ttcatctggttggacgggagcctggagatcctcaatgtgacgcaggctgacgagggcagg
tacacctgtttcgctgagaaccacttggggaaggccaacagcactcgccctctgctggtc
acagagtccacaaagatcaccttggcaccgtctaatgcagatgctaatgtgggagatgac
acctggatgcagtgtgcagcatcacatgaccagctggtggacatcacttttgtctggtcc
ctggatggaagagaaattgatttacacaaggacagtgcgcattttgaaagcgtcttgaat
ggcagttcaaatagcaagctgctgattaaaaatgtccagctgaagcacgctgggcactac
acgtgcatcgcaaagacccaggtcgacaacatcaccgcctctgcccacctggttgtcaga
ggtccccctggtcccccaggtggagtacgaataataaacaaaactgacaagagtgtgacg
ctgcagtggagccgtggagcagaccaccacagcccagtttccaaatataccatccagtac
agagaccagttctccaaagatgagtggaagattgccactacatctccagctaatgttgaa
gggaacacagagacagccactgtggtggatttgttcccctggacagaatacgagttcagg
gtcattgccaccaacactctgggaacaggagatccaagcaggccatcgtctaaagagaaa
actcaggaatcagttcctgtggtggcgccctcagatgtcggtggtggtggaggagccagc
agagaactgaccatcacttggacgccagtccagcctccgtactactttgggacaaatttt
ggctacatcgtggcctttaaaccccacggtgagctggagtggaaaagggtaacagtaact
gatcccgaggccaaacattatgtccacaaagaccccaacattgctcctctgacgcagttt
gaagtcaaagtgaaagcatttaacagccaaggagagggaccctacagcctgacagccatc
atttactctgcaaaggacgcaccatctgaagctcctgcaaatgttgacgttcgactgctt
tctgccacaatggctacaatctcctggaatcacctcccacagaacagcacagatggatac
cagataaaattctggagggatcatgaagacggtgaaggtggagctcaaagggtgggcgtg
ctagccacagaaaatcagactaaacttgatggtttgaggccaaactcggaatacctcatt
gaggttcgcggctacaactctgcaggatatgggccaccaagcaaacgcatcaggatccac
accaagaaacctcctccagaccgacctccaaaaatattaggtacaaagctaaagggccag
tttgtgaatattgcctgggagcaggtggaaccactgactaatgaatcatcaatagaaggt
tacaaagtgctgttcaaaccgaagggcagtggtggacccacactgtacacaactaataag
cagtacatagaactccgcctgcctgcagatggggaatatttggtggaagtcagggcgcat
acagagggaggagatggggctgtggcacaaatcagcattaaaggtggaggcattataccc
acagtttctctcagagtaccctccctgctcctggtggttctcctcctcctgaacatttga
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integrated database retrieval system
