Austrofundulus limnaeus (annual killifish): 106525732
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Entry
106525732 CDS
T06063
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106525732
Spliceosome [BR:
alim03041
]
Common components
Common spliceosomal components
General mRNP proteins
106525732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
PRP38_assoc
RRM_occluded
RSRP
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
106525732
NCBI-ProteinID:
XP_013875514
UniProt:
A0A2I4C6C0
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEVTKTQSPDSHDDSKRRKRSRSQERKRSRDRKRSRSRDKKHGR
SREGKYSRSPDRMRSRSRDRRRGGSRERWRNCSWERGGRYRDHQTDMLLDSLTPEERDAR
TVFCMQLAARIRPRDLEEFFSAVGEVRLVRMISDRNSRRSKGIAYIEFVEASSVPLAIGL
TGQRLLGVPIIVQASQAEKNRAAAAAAAAAAAAASTVQKVTSGPRRLYVGSLHFNITRDM
LRGIFEPFGRVENIQLMMDSDNGLSKGYGFITFADAESAKKALEQLNGFELAGRPMKVGH
VTERNEASTASSFLSDELDLTGVEPGTTGRLQLSVPSQIPEGTGVQIPPSAQQALQMSGA
IAIGALAAVSAAMNPALSMNMNPPALNLPSQPLATHCFQLSNMFHHSSENTPGWEFNIQH
DVIEECNKHGGVVHIYVDKNSPEGNVYVKCLSIPAAMASVNALHGRFFRGKMITAAYVPL
PTYHNLFPESVTATQMLAPPPRR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacctggacatcgaggcgatgctggaggctccgtacaggaaggaggtgacc
aagacccagagccctgacagccatgatgacagcaagaggaggaagcgcagtcgcagccaa
gagaggaagcgcagtcgagacaggaagcgcagccgcagtcgggacaagaagcacggccgc
agtcgagaggggaagtacagccgcagcccggacaggatgcgcagccgcagtcgagacaga
cgtagaggtggcagccgagagcgctggcgcaactgcagctgggagcgggggggccgctac
agagaccaccagactgatatgctgctggacagcctgactccagaggagcgagacgctcgc
accgtcttctgcatgcagctggcagcccggatccgaccccgggacctggaggagttcttc
tctgcggtgggggaggtgcgactggtgaggatgatctctgacaggaactcccgcaggtca
aagggcatcgcctacatcgagtttgtggaggccagttcggttccactcgccattggactg
acgggtcagaggctgctgggggtccccatcatcgtgcaggcttctcaggcagagaagaac
cgtgctgcagcagcggcggcggcggcggcggcggcagcagccagcactgtgcagaaggta
acgagtggacccaggaggctgtacgtgggctcactgcacttcaacatcaccagggacatg
ctgcgagggatctttgagccctttggacgggtggagaacatccagctgatgatggacagc
gacaatggtttgtctaaaggctacggcttcatcacttttgcagatgcagagtcagctaag
aaggctctggagcagctgaatggttttgagttggcaggtcggcccatgaaggtgggtcat
gtgaccgagcgcaatgaggcctctacagcttcctccttcctgagcgacgagctggacctg
acaggtgtggagccaggtaccaccggcaggctgcagctgtctgtgccttctcagatacct
gaaggtacaggtgtgcagatccctccttctgctcagcaggctctgcagatgagtggagcg
attgctattggagctctggctgctgtttcagctgccatgaatccagctctcagcatgaac
atgaaccctccagctctgaatcttccatctcagcctctcgccactcactgctttcagctg
tccaacatgttccaccacagcagtgagaacacaccaggttgggagttcaacatccagcat
gatgtcattgaggagtgcaacaaacacggaggagtcgttcacatctacgtggacaaaaac
tcacctgaggggaatgtttacgtaaagtgtttgtccatccctgccgccatggcatccgtt
aacgctctccacggaagattcttcagaggtaagatgatcacggcagcttacgtccccctg
cccacctaccacaacctgttcccagagtctgtgaccgccacacaaatgctggccccgccc
ccaaggcggtaa
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