Austrofundulus limnaeus (annual killifish): 106525801
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Entry
106525801 CDS
T06063
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106525801
04518 Integrin signaling
106525801
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106525801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
F5_F8_type_C
ATG16
Motif
Other DBs
NCBI-GeneID:
106525801
NCBI-ProteinID:
XP_013875594
UniProt:
A0A2I4C6K7
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MIFIFFIVFLPGVKLQNQQDHRVLLDQCHGGSCYPQLGDLMVGRAAQLSASSTCGLNGPQ
KYCIVGYLEEEQKCFFCDSRRPYNHYNNPNSHGVENIITTFDSKRKMKWWQSENGVHQVS
IQLDLETVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCALHFPSVSDETA
SNINDVVCDSRYSGPEPSTGGEVVLKALDPVFEIQNPYAPHIQELITLTNIRVNFTHLFT
LGDTLLSRRRRNPQEKYYYSLYNMVVQGSCFCNGHASQCVPVDAGRGDVFKQPGMVHGRC
VCQHNTAGENCERCQEFHNDSPWRPGEQNTHNICXRCNCHGHSDSCHFDAARYEATGGVS
GGVCEDCRHDRTGPQCERCQPFLYQDPRRALDDPHACKPCDCDPAGSLSGGLCDVLSGQC
FCKENVEGQRCDSCKRGFFGLRQDSPTGCQECMCHSLGSVGSCDPLTGRCECEPLASGLL
CDQCVAGFWGLGNSVFKCSPCDCDIGGALNNMCSPEVGQCQCLPNMIGRRCSDPAPGHFL
PSLNYFLYEAELASPLSGGISSSPPPPPSSPPSPLVNPALLPPCEHYFRSQGFDFKLSNG
RVVLVRRTRHISHGRRLVKNGIPLDPGHALQIIPRQSLADQPETWTGLGFVRVMEGAGLI
FTVDNLPSSMEYQLVIHYEPQGLSDWLATVRIVTLSSGDGGCSDNPTGRKTLTLPGTSRL
SILDSGVCLNAGGQYLVEIIFHKQPGPDNLPILVDLMGLVQRTESVQDFCSHRDLDSFHH
FHCVGLTVSPGSQESPVKLCQGLIQSLSARIHNGAIACRCNVLGSVGPACRKLGGFCBCK
PNVIGRCCDSCAPLTFGFGPEGCKRCECDPRGSTSDLCDQLSGQCACQSHVTGQRCDRCQ
PGFWGFPRCRPCECNNLSETCDETGQCQNCREHATGPHCDRCENGYYGDPVTRQPCQPCL
CPDDVXSGRFFAASCHHDVQSLRVTCHCWEGHTGARCNRCRPGFYADLTLAGAHCEACPC
NNNIHXDDDEACDSSTGECLRCLYNTVGPQCQHCKPGYYGNALQQDCKECSCDRRGTEPT
RCPLEGPCFCSSETGQCPCRTGVRGDLCDECEDEFWDMDGVSGCEPCSCDPVNSISNICN
KVTGQCSCRPEFGGRRCDECGENHFGNPDLQCISCDCNLEGAARPSCDPETGECICRVGV
SGTFCDECAAGHSTFPICKKCHPCTALWTENITHVQKAAQRMRTFIPRLGNNQHFIDSRH
WQQMLDLHSELGNLGNLTSLSLPKLEKMEEVFLKIRKLKDAVDTNTILIDPSLLLHTEMD
NIYLEFQKILKILKEKSIKDPSMIEKPPVEELQNEIQKLHKDFMSDEKRLRSSTRAVEDS
MDTRQEAKHKLEICKCSGDLAKLEKKVKQFSVLKLNQKICGGPDLEDCSKCGGGPLCVGV
VPGAQKASEMAEEIKQQLVKLPSKLQQSKKKISEVQQLSQDTKDQAKDLQHRITTTSGSL
EAEKTKTRELLQRVKHYLMDEMVPPDDIEKMAKTVLRIQLPADIHSVINNINNLINNPTR
LQDDTKKLEEEAAQELLQKAEEVKEKSKSIDVDEVSRDISAANRAVTEAKDNLTAAEQDR
DQAQDQITDVEEKLDLMEKKLPKQPEDLLKDIESLRNKTELNRETARESREAAGFAKNMT
DQMDLQDVVTQFEVLKEKHTNHTSENEAADQVKRILKEAEELQRQVEEKLQQMTGLEKQI
QQQLELKKQKAAEVSELLEMVESLRKEIISRADGYITCTS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcttcttcattgtttttcttccaggggtcaaacttcagaaccaacaggac
caccgggtcctcctagaccagtgtcatggcggctcctgttacccccagctgggtgacttg
atggtgggtcgtgcagcgcagctctctgcctcgtcaacatgtggtctaaacggacctcag
aaatactgcatcgttggatacctggaggaagaacagaaatgcttcttctgtgactctcgg
cgaccctacaaccactacaacaacccaaacagccacggcgttgagaacatcatcacaact
tttgactcgaagagaaaaatgaagtggtggcagtctgagaatggagttcatcaggtcagc
atccagttagatctggaaacagtgtttcagttcagtcacctggtcctcacctttaagagt
ttccggcctgcagccatgttggtggagcggtcaaaggattttggccgtagctggaaagtg
tttcggtactttgcagaagattgtgcgctacatttcccttcagtctctgatgagaccgcc
tccaacatcaatgatgtggtctgtgacagccgatactctggaccagaaccatccactggt
ggagaggtggtgctaaaagctcttgatcctgtctttgaaatacaaaacccttatgctccc
cacattcaagagctgatcactttgacaaacattcgagtgaacttcacacacctcttcaca
ctcggcgacacgctgctgtcccgtagacgcaggaacccccaggagaagtattactactca
ctttacaacatggtggttcagggaagctgcttctgtaatggacacgccagccagtgtgtt
ccagtggacgcaggacgaggggatgtcttcaagcagcctggcatggttcatggtcgatgt
gtttgtcagcacaacacagctggagagaactgtgagcggtgtcaggagtttcacaatgac
tccccgtggaggcccggagaacaaaacacacacaacatctgcayacggtgtaactgtcat
ggccactcagactcgtgtcacttcgatgcagctcgatacgaagcaaccggtggtgtgagt
ggcggtgtgtgtgaggactgccgccatgacagaacggggccccagtgtgaacggtgtcaa
cctttcctatatcaggacccacggcgagcactggacgaccctcacgcctgcaaaccatgt
gattgcgacccagctggttctcttagtggtggtctgtgtgacgtgctgagcggtcaatgc
ttctgcaaagaaaacgtggaaggtcagcgctgtgatagttgcaaacggggcttctttggt
ctgaggcaggacagcccaacaggatgtcaagagtgcatgtgtcacagtttaggaagtgtt
gggtcatgtgatccactgacaggaaggtgtgaatgtgagcctttagcgagtggactgctg
tgtgatcaatgtgtggcagggttctggggtttgggaaactcagtgttcaaatgttctcct
tgtgactgtgacatcggtggagctctcaacaacatgtgttctccagaggtcggacagtgt
cagtgtttacccaacatgatcggtcggcgctgctctgacccggctcctggacattttctg
ccatcactgaactacttcctgtatgaggcggagcttgcttccccactgtcaggaggaatc
tcctcttctcctcctccccctccttcatccccgccttctcccctggttaatccagccctt
ttacctccatgtgagcattacttcagaagccaaggctttgactttaaactctccaatgga
agggtggttttggttcgaaggactcgtcacatcagtcatggaaggagactggtaaagaat
ggaatccctcttgacccgggccatgccctgcagatcattccccgtcagagcttagctgat
cagccagaaacctggactggccttggatttgtcagagtgatggaaggggcggggcttata
ttcactgtggataacctgccatcgtcgatggagtaccagctggtgatccactatgaaccc
cagggtctttctgattggctggctactgttcgcattgtcactctgtcttcaggtgatgga
ggctgcagtgacaacccaacaggaaggaaaacactgactctccctgggacatccagatta
agtattctggactctggggtttgtctgaatgcaggaggtcaatatttggtggagattatc
tttcataaacagccaggacctgataatttgcccattctggtggacttgatgggactggtc
cagagaactgagtcagttcaggacttctgctctcacagggatctggactctttccaccat
ttccactgtgttggattgactgtcagtcctggttctcaggagtcacctgtaaaactctgt
cagggtctaatccagagtctgtcagcacggatccacaatggagccattgcttgcagatgc
aacgtccttggttctgttggaccagcctgcaggaagctgggagggttctgtractgtaaa
cctaacgtgattggtcgctgctgtgattcctgtgctccgctgacgtttggatttggacct
gaaggatgtaaaagatgtgaatgtgatcctcgaggctcgacgtcagatctgtgtgatcag
ctcagtggtcagtgtgcatgtcagtcacacgtaacgggccaacgctgtgatcgctgtcag
cccgggttctgggggttcccaaggtgtcgaccatgtgaatgtaacaacctgtcagaaaca
tgtgatgagacgggacagtgtcaaaactgcagggagcacgccactggaccacactgtgat
aggtgcgagaatggttactacggtgatccggtcaccagacagccttgtcagccctgcctg
tgcccagacgatgtcarcagtgggcgattctttgctgcttcctgtcaccatgacgtacaa
tccctcagagtgacgtgycactgctgggagggccacacaggtgcacgctgcaacagatgc
agacctggtttctatgctgacctgaccctggcaggtgctcattgtgaggcctgtccctgc
aacaacaacatccacmcggacgatgatgaagcctgtgacagctcgaccggagagtgtctg
cgctgcctttacaacacagtgggaccgcagtgccaacactgcaaacctggttattatggc
aacgctttgcagcaggattgtaaagaatgctcttgtgaccggcggggaactgagccgact
cggtgtcctctggagggtccttgcttctgcagttcagaaactggacaatgtccctgcagg
acaggggtgaggggagacctctgtgatgagtgtgaggacgaattctgggacatggacgga
gtgtcgggatgtgagccctgcagctgtgatcctgttaactccatctccaacatatgcaat
aaggtgacgggacagtgttcatgtcgtcctgagttcggaggaagacgatgcgatgaatgt
ggagaaaaccattttggaaatccagacctgcagtgcatctcctgtgactgtaacytggaa
ggagctgcacgaccatcatgtgaccctgaaaccggcgagtgcatttgtcgtgttggagtc
tctggtaccttctgtgatgagtgtgcagcgggtcactccacgtttccaatctgcaagaag
tgccacccgtgcactgccctgtggactgaaaacatcacccatgtccagaaagcagcccag
aggatgaggactttcatccctcgccttggcaacaaccagcacttcattgacagtcgccac
tggcaacagatgctggacctgcactccgagctgggcaacctcggcaatctgacgagtctt
tctctgccgaagttggagaaaatggaggaagttttcctgaagatcagaaagctgaaagat
gctgtcgacactaacacaattctgattgacccgtctctgctgctccacactgaaatggac
aacatttatctagagtttcagaaaattctaaaaatcctaaaggagaaaagcatcaaggat
ccaagcatgatagaaaagcctccagtagaagagctgcagaatgagatccagaagcttcat
aaagactttatgtctgaygagaagaggctaagaagctccaccagagctgtagaagactcc
atggacaccagacaggaagctaaacacaaactggagatttgcaaatgcagtggagacctg
gcaaagctggagaagaaggtcaaacagttcagtgtgctcaaactcaaccaaaagatctgt
ggaggaccagatctggaagactgttcaaaatgtggtggaggtccrctctgcgttggagtt
gttcctggagctcagaaagcatcagagatggcagaggaaataaagcagcagctcgtcaaa
ctcccgtccaaactgcagcagtccaagaaaaagatcagtgaagtccagcagctgtctcag
gacaccaaggatcaggccaaagacctgcagcaccgaatcaccactacctctgggtctttg
gaggcagagaaaactaaaaccagggagctgctccagmgagtcaagcactacctgatggat
gaaatggttcctccagatgacatcgagaaaatggccaaaactgttctgagaatccagttg
cctgctgatattcactcagtgatcaacaacatcaataatctgatcaataatcccaccaga
ttgcaggaygacacaaagaagctggaagaggaagctgctcaagagctgctgcagaaagct
gaagaagtgaaggagaagagtaaaagtattgacgtggacgaggtcagcagagacatttct
gcagcaaacagagctgtaacggaagctaaagacaacctgacagcagctgaacaggacaga
gaccaggcccaagaccaaatcacagatgttgaagagaaactggacctcatggagaaaaaa
ctgccgaagcagcctgaagatctgctgaaagacatcgaaagtctgagaaataaaactgaa
ctgaacagagagacggccagagagtccagggaggcagcaggctttgctaaaaacatgact
gaccaaatggatctgcaggacgtcgtgacccagtttgaggttttaaaagaaaaacacaca
aatcacacatctgagaacgaagctgcagatcaagtgaagcggatcttgaaggaggctgaa
gaactgcagagacaagtggaggagaaactccaacagatgacaggtttggagaagcagatc
cagcagcagctggagctgaagaagcagaaagcagcagaagtgtctgagttgctggagatg
gtggagtcactgaggaaggaaataatctctcgagctgatggatacatcacctgtacctct
taa
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