Austrofundulus limnaeus (annual killifish): 106525802
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Entry
106525802 CDS
T06063
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106525802 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106525802 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
106525802
NCBI-ProteinID:
XP_013875595
UniProt:
A0A2I4C6I2
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MLQLQFAVLLALKVFTCAQEDGASGGGALDDLIFPALTDMCTEGSCYPATGDLLIGRAHR
LTSTSTCGLKRPEPFCIVSHLQEEKKCFVCDSGVVYDELSSHTNSHRVENVVTTFAPNRL
KTWWQSENGVENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSANFGKTWQVYRYFAY
DCESSFPSVSQGPMQKVDDVICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPQIQNLL
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVEGRGQ
NREGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKRCNCNQHSNSCHFDM
AVFLASGNVSGGVCEDCRHNTAGHNCEQCKPFYYQHPERDIRDPNICHPCSCDPEGSLHG
GICDGMTDVRXGLIAGQCRCKVNVEGERCERCKPAYFGLSDDPDGCKACTCSPLGTAPGG
NPCDRETGSCFCKRLVTGRDCDQCVAEHWGLSNDMDGCRPCDCDLGGAINNQCDQVSGQC
ICKDHMFGRRCDQVESGFYFVALDHYTYEAEDAKFGPGVTVVPRPHPYDHIPTWTGRGLA
NVPEGAFLEFSVDNIPHSMEYDIVIRYEPQLPDQWEEVLMTVMRPGPIRADSRCINTVPD
DDNQMISLHPSSRYVVLPRPVCLEAGLNYTIRLSLPLYSALSDVHSPYTLIDSIVLMPHC
RSLEMFTASVEGESSGNGAWETFQRYRCLESSYSVVKSPMTDICRNFIFSISALLHQGAK
ECQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDQCAPATFQFGPSGCRACSCNPEGSQSP
FCDQLTGQCVCVAGAHGRQCDRCLPGHWGFPSCRPCSCNGHADSCEAHTGRCIXCRDHTT
GHNCDRCLNGYYGDPVLGSGDHCRPCMCPDGPVSLRQFAGSCYRSDDSEQVVCVCNAGYK
GARCDRCSPGYYGNPAEAGGQCLPCRCNNNIDMLDPESCDAQTGECLRCLYHSEGTACQS
CKLGYYGNALVQDCRKCVCNQLGSDSSSCQSPSDCHCDRSSGQCHCRPNVIGQHCDRCAP
DTWNMASGLGCQHCDCDSKHSYGTSCNEISGQCSCHPGFGGRTCNECRELFWGDPEVKCH
ACDCDPRGVSEQQCNKVSGHCVCVEGVSGPRCDVCARGFTGTFPDCHRCHQCFAEWDNVI
GQLTNQTHRLVNKVNAIKASGISAPYRKSFQSMEKSAADIQVILDQNPASQPLSEIQSLL
QQASDLMAALTQTLNNTEETLVLVDQQDSAVKTKVDFMTADAQKLERTVLELLDQVEFIK
NSDIRGATGSVTKYFQQSQAAEARANASTVDAGSPVETSAALRNLTEDKLNQTTEEFLQR
HSEHAQRLDTLAGELQTLDLSDISRKTCGSPLPGQNSCWSSSCGGLGCADSEGQSRCGGE
GCDGAVATANNVMMKAQESEREILSTMAEVEKLSKMVSEVKKQADEAKLSAFNVLMKTNR
TKHKVNQSNEELRSLIRQIKDFLTQDAADPESIELVANEVLAMQMPTTPAHLQNLTEEIR
QKVGELGHIESILQXSADDIQRAETLLERARGASEAAADVKDSAERVKQALEDAQKAQTA
ASNAIQQATTNIQTTNHLLNSVQLETADAEQKLNNATQRLERLEQDVMLLREKSENVTLS
NKLTNQDAASIEQIAKDLKQDLESEVKQKYSTVEELIGQNAGGVADAKKRAESLQNEAKQ
LLLQASDKLQLLKDLEKSYDDNQRTLEXKAEQLVELEQAVKKLLQEISHKVTVYSTCLF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcttcagtttgcggtgctgctcgccctgaaggtgttcacctgtgctcaggag
gatggagcctcagggggcggggccctggatgacctcatcttcccagcgcttactgacatg
tgcacagagggcagctgttacccagcaacaggagaccttctgattggccgagcccaccgg
ttgacgtccacctccacctgtggactgaagcgtccggagccattctgcatcgtcagccac
ctgcaggaggagaagaagtgctttgtttgtgactcgggggtggtttacgacgagctcagc
agtcacaccaacagccatcgtgtcgagaacgtggtgaccacattcgctccgaacagactg
aagacctggtggcagtcagagaatggtgtagagaacgtcaccatccagctgaacctcgag
gcggagtttcatttcacacatctcattatgacctttaagacgtttcgaccggctgccatg
gtcattgagcgatctgcaaactttggaaaaacgtggcaggtttaccgttattttgcctac
gactgtgagtcctccttcccatcagtttctcaaggtcccatgcagaaggtcgatgatgta
atctgtgactcccgttactccgacattgagccatccactgagggggaggtaatttacaga
gttttggatccggcgtttagaattgaagacccctacagcccacaaatccagaatttatta
aagatcaccaacctgagggtgaaattcaccaaacttcacacactcggagacaacttgctg
gactctcgaatggagattaaagagaagtactactatgccatctatgacatggtggtccga
ggaaactgtttctgctatggacatgcctctgaatgtgccccagttgagggccggggccaa
aacagggagggaatggtacatggtcactgtatgtgtaatcacaacactaaaggactgaac
tgtgaacagtgtcaggatttctaccacgatctcccatggagaccggctgagggacggaac
acaaacgcttgcaagaggtgtaactgtaatcagcactcgaactcgtgccacttcgacatg
gccgtgttcttggcatcaggaaacgtcagcggaggagtttgtgaagactgtcgacataac
acagcaggacacaactgtgagcagtgcaaaccattttactatcaacatccagagagagac
atcagagacccaaacatctgccatccctgcagctgtgaccctgagggctctctgcacgga
gggatctgtgacgggatgacggatgttcggrccggtctcatcgctggtcagtgccgctgt
aaagtcaacgtagagggtgaacgctgtgagcgctgcaaaccagcttactttggtctgagt
gacgatccagayggatgcaaagcttgtacctgcagtcctctgggaacagctcctggagga
aacccctgtgacagagaaacaggaagctgcttctgtaaacgtctggtgactggacgsgac
tgtgaccagtgtgtggctgaacactggggtctcagtaacgacatggatggctgcagacca
tgtgactgtgatcttggaggagccatcaacaaccagtgtgatcaggtgagcggccagtgc
atctgcaaagatcacatgtttggacgtcgctgtgaccaagttgagtctggattctacttt
gttgctctggatcactacacctacgaagcagaagatgccaagtttggacctggtgtgaca
gtggtcccgaggccccacccgtatgatcacattcccacctggacaggcaggggtctggcc
aatgttccagagggggcyttcttggagttctctgttgacaacattcctcattccatggag
tacgacattgtcatccgctatgagcctcagctgcctgaccaatgggaggaggttttgatg
actgtgatgaggcctggaccaatcagagctgacagtcgctgcatcaacactgtacctgac
gatgacaaccaaatgatctcacttcaccccagctcccggtatgtggttcttccgaggccc
gtttgtttggaagctggactgaactacaccatccgtctgagtttgccactgtactcagct
ctcagtgatgttcactccccgtacacgctcattgactcgatcgtgttgatgcctcactgc
aggagcctggaaatgttcaccgcttcagtggaaggggagtccagtgggaacggcgcttgg
gaaacatttcagcgctaccggtgtttggagagcagctacagtgttgtcaagtcaccaatg
actgacatctgcaggaatttcatcttcagcatttctgccctgttacaccagggagccaaa
gaatgccagtgtgacccccagggctccctcagcaccgtgtgtgatcccagtgggggtcag
tgtcagtgtcgacccaatgtggttggcaggaactgtgaccagtgtgctcctgctaccttc
cagttcggaccaagtggctgcagagcatgttcctgcaaccctgaggggtcccagagtcca
ttctgtgatcaactgaccggtcagtgtgtttgtgtcgccggagcacacggtcgacagtgt
gatcgctgtctgccgggtcactggggcttcccgtcctgtcgaccctgctcatgcaatggc
cacgccgactcctgtgaggctcacacagggcgctgcatcgyctgcagggaccacacaact
ggacacaactgtgacaggtgtctgaacggctactacggtgacccagtgttgggatcaggt
gaccactgtcgtccctgtatgtgtcccgatgggcctgtaagtctgcggcagtttgcagga
agttgttaccgcagcgatgactctgagcaggtcgtctgtgtctgcaatgcaggatacaaa
ggtgctcgctgcgataggtgctcacctggctactatggaaacccagccgaggcggggggg
cagtgtcttccgtgtcggtgcaacaacaacatcgacatgttggaccccgagtcctgtgat
gctcaaaccggcgagtgtctgcggtgcctgtaccacagcgagggcaccgcctgccagagc
tgcaaactgggttattatggaaatgctttggttcaagactgcaggaaatgtgtctgtaat
cagctgggcagtgattcttccagctgtcagtcacccagcgactgccactgcgaccgcagc
agcggtcagtgtcactgccggcccaacgtgattggtcaacactgcgaccgctgcgctccg
gacacctggaacatggcgagcggcctcggctgtcagcactgcgactgcgactccaaacac
tcgtacgggacgtcctgtaatgagatcagcggtcagtgctcttgtcatcctggtttcggt
ggaagaacgtgcaacgagtgcagagagttgttctggggagaccctgaagtaaaatgtcac
gcctgcgactgtgacccccgcggggtctcggagcagcagtgtaacaaagtcagcggtcac
tgcgtctgcgtggagggcgtgtcgggaccccggtgtgacgtctgcgctcgcgggttcacc
ggaacctttccagactgccatcgctgccaccagtgtttcgcagaatgggacaacgtcatc
ggtcagttgaccaatcagacgcatcggctggtcaataaggtcaacgccattaaagccagc
ggaatcagtgcgccttacaggaagtcctttcagagcatggagaagagcgccgctgatatc
caggtcatcctagaccaaaacccggcctcacaaccactgagtgagatccaaagcctgctt
cagcaggcaagtgacttgatggcagctctgactcagaccttgaacaacactgaggagaca
ctggttctggtggaccaacaggattctgctgtgaaaaccaaagtggacttcatgacggcc
gatgctcagaaactggagcggaccgtcctggagctgctggatcaggtggagttcatcaag
aactccgacatcagaggtgccacaggcagtgtcaccaagtacttccagcagtctcaggca
gctgaagcacgagccaacgcctcaactgtcgatgccggcagcccagtggaaacctctgct
gctctacggaacctcacagaggacaaactgaaccagaccacagaggagttcctgcagagg
cactctgagcacgctcagagactggacacgctggcyggagagctgcagacgttggacctg
tctgatatcagccgcaagacctgtggcagtccactacctggtcagaactcatgctggtct
tcgtcctgtggtggtctgggatgtgcggactcygagggtcagagcaggtgtgggggagaa
ggctgcgatggcgccgtagcgacagccaacaatgtgatgatgaaagcacaggagtccgaa
cgggaaatcctgagcaccatggcagaggtggagaaactctcaaagatggtgtctgaggtg
aagaaacaagctgatgaggccaaactgagcgcttttaacgtcctgatgaagaccaacaga
accaaacacaaggtcaaccagagcaacgaggagctgcggagcctcatcagacagatcaaa
gattttctcactcaggatgctgcagacccggagagcattgaactcgtggccaacgaggtt
ctggccatgcagatgccgaccactccggcccatctgcagaatctcacagaggagatccga
cagaaggtgggagagctaggacacatagagagcatcctgcagcwgagcgccgacgacatc
cagagagctgaaaccctgctggaacgagccagaggagccagtgaggctgcagctgatgtg
aaagactctgcagagagagtaaaacaagcactggaagatgctcagaaagctcagactgca
gccagcaacgccatccagcaggccaccaccaacatccagaccaccaaccatctgctcaac
tccgtacagttggagacagcagatgcagaacagaagctgaataatgccacccagagactg
gagaggcttgaacaggatgtgatgctgctcagggaaaaatctgagaatgtcacgctgagc
aacaagctgaccaaccaggacgctgcgagcatcgaacagatcgcaaaggacctaaaacag
gatctggagtcggaggtgaagcagaagtacagcacagtggaagagctgattggtcaaaat
gcagggggtgtggctgatgccaagaagagggcggagtcactgcaaaatgaagccaaacag
ctgctgytgcaggccagtgacaagctgcagctacttaaagatttggagaagtcttatgat
gacaaccagcggactctggaggkgaaagcagagcagctggtggagctggagcaggcggtg
aagaagctgctgcaggagatcagccacaaagtgacggtttacagcacctgcctgttttag
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integrated database retrieval system
