Austrofundulus limnaeus (annual killifish): 106525830
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Entry
106525830 CDS
T06063
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04517
IgSF CAM signaling
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106525830
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106525830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106525830
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106525830
Intermediate filaments
Intermediate filament-binding proteins
106525830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DYH2-5-8_CC
SOS1_NGEF_PH
PHA_gran_rgn
SCAR_helical
DUF7854
PMC2NT
PH_11
Motif
Other DBs
NCBI-GeneID:
106525830
NCBI-ProteinID:
XP_013875635
UniProt:
A0A2I4C6M1
LinkDB
All DBs
Position
Unknown
AA seq
2344 aa
AA seq
DB search
MTSVAAELEHMEIQQQQYNNDGVNNRWDADDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDA
LLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKARRQRLELNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQVDRVRNVNSNAQRFATDT
DGYKPCDPQIIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSEDYGKDLTGAVRLLSQHKAFEDEMSGRAAHLQQTIKQGEELVADNHFGAEKIKER
IQDIQEQWAALERLSAVRKARLQEACNQHQFQADADDIDTWMLDVLRIVSSVDVGHDEFS
TQALVKKHKDVAEEIGSYRPVIEALHDQARTLPPEKADSEEVQTRLAGIEERYKEVAELT
RLRKQALQDALALYKMLSEASACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NSQASRVAVVNQVARQLIHCGHPSEKEIKAQQDKLNTRWSQFRDLVDQKKENLNSALGVQ
NYHLECNETKSWIKEKTKVIDSTQELGNDLAGVMALQRKLTGMERDLVAIEDKLSDLGKE
AERLASEHPEQSEAIRGRLAEITGVCGDMKDSLKNREESLGEASKLQQFLRDLDDFQSWL
SRTQTAIASEDMPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEEKISGVVDTGRRLVADGNVNAERIQEKVDSIDQRRK
KNRQAANDLLSRLKDNRDLQKFLQDCQELNLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIDKDGQTLMTEKPDTEAMVKEKLASLKTMWNDLESTTQTKAKCLFD
ANKAELFTQSCADLDKWLTTLDGQLQSDDYGKDLTSVNILLKKQQMLESQVDVRQKEVEE
LQKQSQALSQEGKGSDEVDGQRISVEKKFHGLQAPLQKRRENLMASREIHQFNRDVEDEI
LWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQHILREGSPT
AELIRHRLTDLQSLWEQIKKETEKRHSRLSEAHEAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAGHPDSERIGMRQSQVDKL
YAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINSGHGDAATIAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEGRRVKLADTGDKFRFFSM
VRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTVCIELGKALLA
RKHYASEEIKEKLLQLTDKRKEMIDKWENRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPY
LSSREIGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRRQEEEERKRQ
PAEAADAAAQHREGEPVSQNGLPSEQESPREAVDGSDVVNGVSEPSPSGSPGASRKAKPS
QAATLPAKTQQDAPTSLLESFLHRKHEWEGHNKKASNRSWHNVYCVINHQEMGFYKDQKS
ASQGIPYHSEIPVSLKDAVCEVAVDYKKKKHVFKLKITDGNEYLFQAKDDEEMNTWISKI
SAAMAGEKPEVTPSSHSTPAPAPAPRAQTLPASVAAATTTAAESSPGKREKDKEKRFSLF
SKKK
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtggcggcggagctggagcacatggagatccagcagcaacagtacaacaac
gacggcgtcaacaaccgctgggatgctgacgactgggacaacgagaacagctcggctcgg
ctgttcgagcgctcgcgcatcaaagctctcgcagatgagcgcgaggcggtccagaagaag
accttcaccaagtgggtcaactcccacctgtcccgggtctcctgcagaatcacggacctc
tacatggacctgagggacgggcgcatgctcatcaagctgctggaggtcctgtcaggagag
agactgcccaaacccacgaagggccggatgaggatccactgtctggagaatgtggacaag
gctctgcagttcctgaaggagcagagggttcacctggagaacatgggctcccacgacatc
gtggacgggaaccaccgactgactctgggactcatctggaccatcatcctccgcttccag
attcaggacatcagtgtggagacggaggacaacaaggagaagaagtcggctaaagatgct
ctgctgctctggtgtcagatgaaaactgcaggatatccaaacgtcaacatccacaacttc
accaccagctggagggacgggatggccttcaacgctctcatccacaaacacaggcccgac
ctgatcgacttcgacaagctgaagaaatccaacgctcactacaacctacagaatgccttc
aacctggctgagcagcacctcgggctcaccaagctgctggaccctgaagacatcagcgtg
gaccaccctgatgagaagtccatcatcacctacgtggtcacctactatcactacttctcc
aagatgaaggcgctgaaggtggaggggaagagaatcggaaaggttctggataatgccatt
gagacggagaagatgattgagaagtacgagtctctggcgtctgacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactctctggtgggagtccag
cagcagctgcaggccttcaacacgtaccgaactgtggagaaaccacccaagtttacagaa
aaaggaaacctggaggtccttttgttcaccatccagagtaaaatgagagcaaacaatcag
aaggtttacactcctcgagagggaaaactcatctctgacatcaacaaggcatgggagcgc
ctggagaaggcggagcacgagcgagagctggcgttgaggacggagctgattcgccaagag
aaactggagcaactcgctcgcagatttgaccgtaaagccgccatgagagagacgtggctg
agcgagaaccagaggctggtctcacaggataattttggatttgacctgcaggccgttgaa
gctgccaccaaaaaacatgaagccatagaaacagacatagcagcctatgaggagcgggtt
caggcagttgtttctgtggcgaaggagctggaggcggagagttaccacgacatcaagcgc
atcacggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaag
gcccgcagacagaggctggagctgaacctgggtctgcagagggtcttccaggaaatgctc
tacatcatggactggatggacgagatgaagatgctgctgctctctcaggattatgggaaa
cacctgctgggcgtggaggacctgctgcagaaacacgccttggtggaggccgacatcggc
atccaggtggaccgagtccgcaacgtcaacagcaacgctcagagattcgccacagacaca
gacggttataaaccctgtgaccctcagatcatcagggaccgcgtggctcacctggagttc
tgctaccaggagttgacccagctggcagccgagcgcagagctcgcctggaggagtcccgg
cgcctctggaagttcttctgggagatggctgaagaggagggttggatcagagagaaggag
cagatcctctcctccgaggattatgggaaggatctgacaggtgccgtgcggctgctgagt
cagcacaaagccttcgaagacgagatgagcgggcgagccgcccacctgcagcagaccatc
aaacagggcgaggagctggtggccgacaaccacttcggagccgagaagatcaaagaacgg
attcaggacatccaggagcagtgggcggctctggagcggctctctgctgtccgtaaagct
cgtcttcaggaggcctgcaaccagcaccagttccaggctgatgctgacgacatcgacacc
tggatgttggacgttctgcggatcgtctccagcgtggacgtcggccatgatgagttctcc
acccaggctctggtgaagaaacacaaagatgtcgccgaggagattgggagctaccgaccc
gtcatcgaggcgctccacgatcaggcccggacgctgccgccggagaaggcagactctgag
gaggtccagacccggctggcgggcatcgaggagcgttacaaggaggtggcggagctgacc
cggctcaggaagcaggctctgcaggacgccctggcgctctacaagatgctgagcgaagcc
agcgcctgtgagctgtggatcgatgagaaggagcagtggctcaacagcatggagatcccc
gagaaactagaggacctggaggtcatccagcaccggtttgagagtctggagccagagatg
aacagccaggcgtcccgggtcgccgtggtcaaccaggtggcccggcagctcatccactgc
ggacatcccagtgagaaggagatcaaagctcagcaggacaaactcaacaccaggtggagt
cagttcagagacctggtggaccagaagaaggagaacctgaactctgctctgggagtccag
aactaccacctggagtgtaacgagaccaagtcctggattaaagagaagaccaaggtgatc
gattccacccaggagctggggaatgacctggctggcgtcatggccctgcagaggaagctg
accgggatggagcgagacctggtggccatcgaagacaagctgagcgacctgggcaaagag
gccgagcggttagcctccgaacacccggagcagtccgaggcaatcagaggacgtctggct
gagatcacaggcgtctgtggggacatgaaggactcgttgaagaaccgtgaggagtccctg
ggcgaggccagcaagctgcagcagttcctccgcgacctggacgacttccagtcgtggctg
tctcgcacccagacggccatcgcctccgaggacatgcccaacacgctggccgaggccgag
aagctgctggctcagcacgagggcatcaagaacgagatccgcaactacgaggaggactac
cagaagatgcgggacatgggtgagatggtgacgcagggccagacggacgcgcagtacatg
ttcctgcggcagcggctgcaggcgctcgacacgggctggaacgagctgcacaagatgtgg
gagaaccgccagagcctactgtcccagtcccacgcctaccagctgttcctgagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtcctggctcacacagagatgccc
accaccctggagggggcggaggccgccatcaagaagcaggaggacttcatgaccaccatg
gatgccaacgaggagaagatcagcggcgtggttgacaccgggcgccgcctggtcgctgac
ggcaacgtcaacgccgagcgcatccaagagaaggtggactccatcgaccagagacgcaag
aagaaccgacaggctgccaacgacctgctgtcgaggctgaaggacaacagagacctgcag
aagttcctgcaggactgtcaggagttgaacctgtggatcaacgagaagatgctgacggct
caggacatgtcctacgacgaggccaggaacctgcacagcaagtggctcaaacaccaggcc
ttcatggccgagctgcagtccaacaaggagtggctcgacaagattgataaggacggccag
acgctgatgacggagaagcccgacacggaggccatggtgaaagagaagctggcgtccctg
aagacgatgtggaacgacctggagtccaccacccagaccaaagccaagtgtctgtttgac
gccaacaaggcggagctgttcactcagagctgcgctgacctcgacaagtggctgaccacc
ctggatggacagctgcagtctgacgactacggcaaagacctcacctccgtcaacatcttg
ttgaagaagcagcagatgctggagagccaggtggacgtgcgtcagaaggaggtggaggag
ctgcagaaacagtcccaagccctcagccaggaggggaaaggctcggacgaggtggacggc
cagaggatcagcgtggagaagaagttccacggcctccaggcaccgctgcagaagaggcgg
gagaacctgatggcctctcgcgagatccaccagttcaacagagacgtggaggatgagatt
ctttgggtggaggagaggatgcctctggccacatctacggaccacggacacaacctgcag
acagtccagctgctcatcaagaagaaccagactctgcagaaggagatccagggccaccag
cctcgatacgacgacatctttgagcgcagccagcacatcctgagggagggcagccccacg
gccgagctgatccgccaccggctcactgacctccagtctctgtgggagcagatcaagaag
gagacagagaaacggcactctcgcctgagcgaggcccacgaggcccagcagtattacttt
gatgctgccgaggccgaggcgtggatgagcgaacaggagctctacatgatgtcagaggag
aaggccaaggacgagcagagttcagtagccatgctgaagaagcatcagatcctggagcag
gcggtggaggactacgctgacactgtccaccagctgtccagcacaagccgtggcctggtg
gctgccggacaccctgacagcgagcgcatcggcatgcgtcagtctcaggtggataagctg
tacgcaggcctgaaggatctgtctgaggagcgccgggggaagctggacgagcgtttccga
ctcttccagctgaatcgggaggtggatgacttggagcagtggattgctgagagggaggtg
gtggctggatctcacgagctcggacaggactacgagcacgtcactatgcttcaggagcgt
ttcagagaatttgcccgcgacacaggaaacatcggccaggagcgtgtggacggtgtcaac
cggctggcagacgaactgatcaactcgggccacggcgacgccgccaccatcgccgagtgg
aaggacggcctgaacgaggcctgggccgacctgctggagctcatcgacacgcgcacgcag
atcctcgcagcctcctacgagctccacaagttctaccacgacgccaaggagatcctcaac
cgcatcctggacaaacacaagaagctcccagaggagctgggccgggaccagaacaccgtg
gagaccctgcagaggatgcacaccaccttcgagcacgacatccaggctctgggaacgcag
gtccggcagcttcaagaagatgctgttcgcctgcagtcagcatacgcaggagacaaagct
gacgatattcagaagcgagagggagaggtcctggaggcctggaagaacctgctggaggcg
gcggagggtcggcgagtgaagctggccgacaccggagacaagttccgcttcttcagcatg
gtgcgcgacctgatgctgtggatggaggacgtgatccggctgatcgaggcccaggagaag
cccagagatgtgtcgtcagtggagctgctgatgaacaaccaccagggcatcaaggcagag
attgacgctcgtaacgacagcttcactgtctgcatcgagctggggaaagcactgctggcc
cggaaacactacgcttcagaggagattaaagaaaagttgttacagttgacagacaagagg
aaagagatgattgacaagtgggagaacagatgggagtggcttcgactggtcttggaggtg
caccagttctcccgtgacgcgggcgtggccgaggcgtggcttctgggtcaggagccgtac
ctgtccagcagggaaatcgggcagaacgtggacgaggtggagaagctcatcaaacgccac
gaggccttcgagaagtcggccgccacttgggaggagcgcttctctgcgctggagcggctg
accacgatggagttgctggaagtgagaagaaggcaagaggaggaagagagaaagaggcaa
ccagcagaggctgctgacgctgcagctcagcacagagagggcgagcctgtgtcccagaac
gggctgccatctgagcaggagtctcccagggaggccgtggacgggtccgacgtggtgaac
ggggtgtcagagcccagtccatcagggtctcctggggcgtcacgtaaagccaagcccagc
caggcagcgaccctgccggctaaaacccaacaggacgccccgacgtctctgctggagagc
ttcctgcaccgcaagcatgagtgggagggccacaacaagaaggcttccaacaggtcgtgg
cacaacgtgtactgtgtgatcaaccaccaggagatgggcttctacaaggatcagaagagc
gccagtcagggcatcccctaccacagcgagatccctgtcagcctgaaggacgctgtgtgt
gaggtggctgtggattacaagaagaagaagcacgtctttaagctcaagatcacagacggc
aacgagtatctcttccaagccaaagatgatgaggagatgaacacctggatctctaagatc
tccgccgccatggcgggtgagaagcccgaggtcacgcccagcagccacagcacgccggcc
cctgctcccgccccccgcgcccagacgctgcccgcctccgtggcggcggcgacgacgacg
gctgcggagtcgagccccggcaaacgagagaaagacaaggagaagcgcttcagtctgttc
agcaagaagaaatag
DBGET
integrated database retrieval system
