Austrofundulus limnaeus (annual killifish): 106525916
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Entry
106525916 CDS
T06063
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform p40 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106525916 (tia1)
03041 Spliceosome [BR:
alim03041
]
106525916 (tia1)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106525916 (tia1)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106525916 (tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_ACIN1
Calcipressin
Nup35_RRM_2
SCO2_C
Motif
Other DBs
NCBI-GeneID:
106525916
NCBI-ProteinID:
XP_013875758
UniProt:
A0A2I4C6Y1
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NEPTNTKQLSFDEVLNQSSPSNCTVYCGGVTSGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNVVKCYWGKETTDMVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGSM
VEPGQGVNGTMLTNQAGMSATGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagcctaaaaccctgtacgtggggaatctatcccgggacgtgacagag
gccctcatcttggagttgtttagccagatcggaccatgtaaaagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggttaactgg
gccacaacgccaacgagccaaaagaaagacacgagcagtcacttccatgtttttgttgga
gatttaagtcctgaaatcaccacagatgacataaaagcagcgtttgctccatttggaaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctcctttttcaacaaatgggatgcagagaatgcaattcaacaaatgggaggacagtgg
ctgggaggaaggcagatcagaaccaactgggccaccaggaagcctgctcctaaaactact
aatgaaccaaccaatactaagcagctgtctttcgatgaggtgttgaatcagtccagcccc
agtaactgtacagtttactgcggaggcgtcacatcaggtctcacagagcaaattatgaga
caaactttctcaccttttggacaaataatggaaatccgtgttttcccagagaaaggctac
tcatttgtgaggtttaactctcacgaggcagcagctcatgctatagtttctgtcaatggc
acttccatagagggcaatgttgtgaagtgttactggggcaaagaaaccacagacatggtc
cagggccccatacagcaggtacaaatggcacagcagaacacattgagctttgcagcacag
ccctacaatcagtggggtcagtggtacagcaacacacaacagattggtcagtatgtcccc
aatggatggcaggtcccaagctatggagtctatggacagacctgggatcagcagggctac
aatcatttacacgctggagctggatggacgggtgtgggtgctgtcagcaatgggagcatg
gtggagcccgggcagggggtcaacgggacgatgctaaccaaccaagcaggcatgagcgcg
actggctaccacacccactga
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