Austrofundulus limnaeus (annual killifish): 106526111
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Entry
106526111 CDS
T06063
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106526111 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106526111 (exosc6)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106526111 (exosc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106526111
NCBI-ProteinID:
XP_013876053
UniProt:
A0A2I4C7S7
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MPTDTKRVRGPEVSQSPVLFGCRPADVPPSHGPRADGRQRDQVDVRPVFVRCGLVSQANG
SAYIEAGNTKLMCCVYGPRETERKDETDMKCGRLSTDMRLAPFSCPVRGSWIQGSQDRDL
CVMLYESLQPAVCLHRYPRSQIEVSVMVLENGGSVLAHAVTCASLALADAGIEMYDLVLG
CSLRQDGDSYVVDPTYSEETGCRSGGGLTVAFLPSLNQISGLQSDGEMSEETLAAGVRTC
MEGCYKLYPVIQQALIQAVRRAAAPPSES
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagacacgaagcgtgttcgcggtcctgaagtgtctcagagcccggttctgttc
gggtgcaggcccgcagatgttcctccctcgcacggcccccgagcggacggccgtcagcgg
gaccaggtggacgtccggccggtgtttgtgcgctgcggcctggtgagccaagctaacggc
tccgcgtacatcgaggccggaaacaccaaactaatgtgctgcgtttacggaccgcgggaa
accgagcggaaagatgagaccgacatgaaatgtggaagactgagcactgacatgcgtctg
gctccgttctcctgcccggtgcggggctcctggatccaggggagccaggacagggacctg
tgtgtgatgctgtatgagagcctgcagccggctgtgtgcctgcacaggtaccctcgctct
cagatcgaggtcagcgtcatggttctggagaacggcggctcggtcctggcccacgccgtc
acctgtgcctccctggcgctggcggacgcagggatcgagatgtacgacctggttctgggc
tgctccctccgtcaggacggggactcgtacgtggtggaccccacgtactctgaggagacg
ggctgcaggtcgggcggcggtctgacggtggccttcctgcccagtctgaaccagatctct
gggctgcagtcggacggggagatgtctgaggagactctggctgcaggagtccggacctgc
atggagggatgttacaaactgtacccggtcatccagcaggccctgatccaggctgtccgc
cgggccgctgcccctccgtcagagagctga
DBGET
integrated database retrieval system
