Austrofundulus limnaeus (annual killifish): 106526147
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Entry
106526147 CDS
T06063
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04382
Cornified envelope formation
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04514
Cell adhesion molecule (CAM) interaction
alim04518
Integrin signaling
alim04810
Regulation of actin cytoskeleton
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106526147
04514 Cell adhesion molecule (CAM) interaction
106526147
04518 Integrin signaling
106526147
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106526147
09142 Cell motility
04820 Cytoskeleton in muscle cells
106526147
04810 Regulation of actin cytoskeleton
106526147
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106526147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106526147
04515 Cell adhesion molecules [BR:
alim04515
]
106526147
04090 CD molecules [BR:
alim04090
]
106526147
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106526147
Exosomal proteins of breast milk
106526147
Cell adhesion molecules [BR:
alim04515
]
Integrins
Integrin alpha subunits
106526147
CD molecules [BR:
alim04090
]
Proteins
106526147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
106526147
NCBI-ProteinID:
XP_013876106
UniProt:
A0A2I4C7Y8
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MEGRTTCGLWLLTLLLGCERLSAFNLDTENVVRKDGEPGSLFGFSLAMHRQLSPTDKRML
LVGAPQAKAIRGQKSAITGGFYKCEMSTTCSRVIFDNDENLNIESKENQWMGVTVSSQGP
GGKVLVCAHRYQRRNNVNSLTETRDVIGRCYSLSQDLTINPGSPEDGGFWRFCDNRLKGH
EMFGSCQQGLSATFDKDFHYFIFAAPGAYNWKGVVRVEQKNDTLVEMGIFDDGPFEAGDE
NEKDPSLIPVPSNSYMGFSLDSGKRLTKKGQLTVVAGAPRAFFTGAVVLLKTGGEMSRSL
DKEYILEGEGLASSFGYDVTVLDFNGDGWEDIVVGAPQYFEKDGEIGGAVYIYVNKAGKW
DKVKPTRIDGPANSMFGLTVENLGDINQDGYQDFAVGAPLENDGVVYIYHGSANGKIDET
STQVLSGKSMGVKQFGYSLAGNMDLDGNSYPDLAIGSLSDSVFIYRARPVVKIQKEISFT
PNKIDLSQKNCGNTFCLDVKACFFYDASPASYTPSMTVKYSLEVDADYRKIGLVPRATFT
DPSSSDQYKSSGTINMSXKGRKECVTRKLAIQENIKDKLRAISIDVSVDIQDSKRKRRQT
STSQLQPVLDAKDQMKTREKVGFLKEGCGSDDVCESNLQVKYRYGHRTTDQDTFTPLQLE
NGVPVISLSTQKBIALEVTVTNLDKDDAYEASVIINLPNSLTYSAYRVAPNELPITCTAN
VNGSSAECELGNPFKSGSKTTFYIILSTAGISPSINEVEIDLHLNTTSTQPNLGLIKAKA
KVAIMLQLTLTGQVQPSQIYFSGEAKGESAMKTESDIGGAITHQFRIINLGKRLTDVGIA
TLNIEWPKETMNGKWLLYLMKITSKGVEQIKCTQKEDINPLNIKLDNNRKRRATRKDQGG
IDGTISRLIEKKESKTLSCGSGAGCKTIRCPLGDLDSNAVITLSSRLWNSTFIEDYSKLH
HIDVIVKAALHIDSNVKNTVLKNAETEVKLTVFPERIAAQYGGVPWWIIVLSILFALLLL
GLLAFLLWKCGFFERAKFEDEVPSYSAVRIRREERAVNTRNGNWDKVEKKPWMTTWHDKE
HYS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgaaccacctgtggactgtggctgctcaccttgctgctgggctgtgagcga
ctctcggctttcaacctggacaccgagaatgtggtgaggaaggacggggagccggggagt
ctgttcggcttctctctggccatgcaccggcagctttctccgactgataagagaatgctg
ctggttggcgcaccacaagcaaaagccatacgtggtcagaagtctgcgataacaggggga
ttctacaaatgcgaaatgagcacaacatgctcaagagttatttttgataatgatgagaat
ttaaacatagaaagcaaggaaaaccagtggatgggagtcactgtcagcagtcaggggcca
ggaggcaaggttttggtctgtgcccaccgttaccagcgacgaaacaatgtgaactcatta
acagaaacccgtgacgtcatcggccgttgctatagtctgagtcaggacttaactatcaat
cctgggtcacctgaagatggaggtttctggcgtttttgtgacaaccggctaaaaggccat
gagatgtttggttcatgtcaacaagggttatctgctacatttgacaaggacttccactac
tttatctttgcagctcctggagcatacaactggaaaggtgtggtacgcgtggaacaaaag
aatgacactttggtggaaatggggatctttgatgatggaccatttgaagcaggagatgaa
aatgagaaggatcccagcctgatccctgtcccttcaaacagctatatggggttctctctg
gactcagggaagcgtttgaccaaaaagggtcagctgactgtggtggctggagctcccaga
gcattcttcacyggagcagtcgtcctgctgaagacaggtggagagatgagcaggagcttg
gataaggagtacatcctggaaggggagggactggcgtcgtcttttggatacgatgtgact
gtactggattttaacggggatggttgggaagatatagtggttggagcacctcagtacttt
gagaaggatggagaaattggaggagctgtctacatctatgtgaataaagctggaaaatgg
gacaaagtcaaacccactagaatagatggacctgcgaactctatgtttggcctgactgtg
gaaaacttgggtgatatcaatcaggatggttaccaggattttgcagtgggagcacctctt
gaaaacgatggtgttgtttacatctaccatggatcagccaatggaaaaattgatgaaacg
tccacacaggtgctttctggtaaatctatgggagtgaagcagtttggctactctttagca
ggtaatatggacctggatgggaactcctatccagacctggctattggatctctttcagac
tctgtttttatctacagagcccgaccagttgttaaaattcagaaggaaatctctttcaca
cctaataaaattgacctgagccagaagaactgtggcaacaccttctgcttggatgtgaag
gcatgctttttctatgatgcaagcccagcgagctacactccttcaatgactgtaaaatac
tctcttgaggtggacgctgattataggaagattggtcttgtaccgagggcaacctttaca
gacccttctagttctgatcagtacaaatccagtggtaccattaacatgagcrtaaaagga
aggaaagagtgtgttacacggaaacttgccatacaggaaaatattaaagacaaactacgt
gccatctccattgacgtgtctgtagatatccaggattctaaacgtaaacgtagacagacc
tccacttctcaactccaacctgtcctggacgccaaagatcagatgaaaactcgagaaaag
gtgggattcttgaaagaggggtgtggcagtgacgatgtgtgtgaaagcaacctgcaggtg
aaatatcgctatggccacaggacaactgatcaagatacattcacaccattacaattggag
aatggtgtgccggtgatctcactcagcacccagaagracatcgccttggaggtcacagta
accaatctggataaagatgatgcatatgaagcgtcggtgatcataaacttgcccaactcc
ttgacctactccgcttaccgtgttgcacctaatgagctgccaattacctgcacagcaaat
gtaaatggttctagtgctgagtgtgagcttggaaacccattcaagagtggctcaaagacc
accttctacataattttgagtacagctggtatctctcccagcatcaatgaagtggaaatt
gacctgcacttaaacacgacgagtacccagccaaacctaggtctcatcaaagcaaaggca
aaggtggccatcatgttgcagctgaccttaacaggacaagtccaaccatctcaaatmtac
ttcagtggagaggccaaaggtgaatcagccatgaagactgaaagtgacattggcggcgcc
atcacacaccagtttaggataattaacttgggaaaacgactgacagatgttggaattgcg
accctcaacatagagtggccaaaggagacaatgaatggaaaatggcttctgtacctgatg
aaaatcacctccaaaggagtggagcagataaagtgcactcaaaaagaagatatcaaccct
cttaatataaaattagataacaacagaaagaggagagctacacgaaaggatcagggggga
atcgatggcacaatttcacgcttaattgagaagaaggaatctaaaaccttgtcgtgcggt
agtggagcaggctgtaagacgataagatgccccctgggggacctggacagtaacgcagtc
ataactctcagctctcgactgtggaacagcactttcattgaggattattccaagttacat
cacatagatgtgatagtgaaggcagctctgcacattgacagcaatgtgaagaacacggtg
ctgaagaatgctgagacagaggtgaaactgaccgtgtttccagagaggattgctgctcag
tatggaggagtgccgtggtggatcattgtgctctccatcctgtttgccctgttgttgctg
ggactgttagcattccttctttggaagtgtggcttttttgagcgagccaaattcgaagat
gaggttcccagttacagtgcagttcggatcaggcgggaggagagagcggtcaacacgagg
aatggcaactgggacaaagtggaaaagaagccgtggatgacaacttggcacgacaaagaa
cattattcttaa
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