Austrofundulus limnaeus (annual killifish): 106526226
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Entry
106526226 CDS
T06063
Symbol
nipbl
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106526226 (nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106526226 (nipbl)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106526226 (nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
106526226
NCBI-ProteinID:
XP_013876238
UniProt:
A0A2I4C8B6
LinkDB
All DBs
Position
Unknown
AA seq
2549 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEDVNRLLDCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLRTMLARNPGIFREKNVMQPMVPPF
KITQNSMHSPAQSANFQPAAISPNPSSRFVAPQTGSGGRYMGQQNSPVPSPYTPQSPAPG
YIQQYPHQQPPSYNQTQQMQASVASPMVSGGIRNIHEDKVSGQMPGAPNHYPDRLGTEDY
MNMVQRRSIEEGDSTMRNPSFPLRSPQSGCSPASSEGTPKPGPRPPLILQSPPPYAASPR
EGGPDSKHHLQQRKKAPTVKEEKDMYDIVSSPNKDSTKLTLRLSRVKSNESDPAGDVPGM
DQNSDLMETELAFQQVPVLQQNLAARQQQQQVFQQAVGAGGLQPPSSPYDEAELDALAEI
ERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKL
TPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGAAAV
EGSDTALRLKPDGRPEVIKNSVDKHDSRREGRDSSKHRHHEKSSDRRGEMPKSSSRGEHG
RDRDRESERDRRHRSETGSRDRRSPDSRSRGDRDRSGFQTSSMGEPGRSNSRQDGSKLAS
SASGPKIPDSFPAQLLGGHTGALKNFQIPKINRDRESSGSGEGQIWGQPKVKLERLGLVK
DFEKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRFSSGRSSKGEMDPAILKELPPELLAEI
ESTMPLCERVKMNKRKRSTVNERPKYAEVSSDEDFEANGESARKRHRRDKDRTWEFEERE
RRGSGEHRKSGHRDSRRGSGSRYRDSSDEDSPPPSMSEIARKMKMKEKQKKRKAYEPKLT
QEELMDSSTFKRFSASIDNILENLEDVDFTTMADDDEIPQELLLGKHQLNELGSESAKIK
AMGITSRIPSDKLVKLLNILEKNIQDGSKLSTMMNHDQDAEDEERLWRDLIMERVTKSAD
ACLTALNVMTSTRMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGMLSSR
AKRAKCSTHKQRVIVMLYNKICDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSE
LQLCAIKLVTMVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQM
VTALVLQLIQCVVHLPNDKDIFEEYDNKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSK
QGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDY
LGTVAARLRKDAVTSKMDQRSIDRILEESQGTDETQQLQKALLDYMEENAETDPSLVFAR
KFYIAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEIETTGEIMQRAEKRKKFLRNII
KTSPAHFATLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTK
AMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYD
MLIERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQ
KLWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKAC
VQLVDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTT
KCNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLG
AVVNKVTHNYKFVWACFHKFYGALNKLKIQHQEDPNSTTLVANKPFLLRSLFTVGALARH
FDFDLEEFKGPNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFVPEVK
SLYNGILADGLSSINLKIQVLKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSG
MSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPS
MRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQAIASSRKSIIRGFRQDETHSALCS
HLYSMIRGNRQHRRAFLISLLNLFDDSARTEVNMLLFIADNLACFPYQSQEEPLFIMHHI
DITLSVSGSNLLQTFRELLLKEPRRKEKKVKEWKQASDGEDEEEKMNCDSSRSDEEEKSN
SEDDENDEDDVVRRPKKTRKPVQTSDSSDSESDLDDLDVEDVDKVMRLLPDNPTGLLDFA
NAVQGILLLLVLKQHLKNQYGFSDSKIQKYSPTESAKVYDKTVNRKSNIHFNPRQTMDFI
SNNIAHATLSEDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGSS
GPLSGPSPRNQAGPETDDDDSDIDERTPGSSRRSRRAGDSSDPGRMSEIVESMDVIALCC
PKYKDRPQIARVIQKTSIGYSIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKK
IALTSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggatcgctagcctcact
gacttgttgaaccagctgcccctcccttcccctctacctgccaccaccactaagagcctc
ctattcaatgggaggattgcagaggatgttaatcgtctgttggactgtcgagatgagaat
ctggcctcccagttagcccatggtctcaaccaggtctccacggagcacatagagctgaag
gacaacctgggtagcgatgagcctgaaggagatgcaccactgctgttgcggaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagccaatggtaccaccattc
aagatcacccaaaactccatgcatagccctgcccagtcagcaaactttcagcctgctgca
atttctcccaatccatcaagccggtttgtggcrccacagactggttccggtggtcggtac
atgggccaacagaacagtccggtgcccagcccttacactcctcagagccctgcacctggt
tacattcagcagtatccccaccaacaaccacccagttacaaccagacacaacagatgcaa
gcatctgtggcaagcccgatggtgtctggtgggatacgaaatatccatgaggacaaagtc
tctgggcagatgcctggtgctcctaatcactacccagacagacttggtactgaagactac
atgaatatggtgcaacgacggagcattgaggagggcgactccacaatgaggaatccttct
ttccctctgaggtctccgcagtcaggctgttctccagcatcgagcgagggaacaccaaaa
ccgggccctcgcccaccccttattctacagtccccgcccccctatgcagcctcacccaga
gaaggaggccctgactcaaagcatcatctgcagcaaaggaagaaagctcctacagtaaaa
gaggagaaagatatgtatgatattgttagctctccaaacaaggactctacaaaacttacc
ctcaggctgtccagggttaagtcaaatgaatctgatccagcaggtgatgtgcctggtatg
gatcagaactctgacctaatggagacagagctggcctttcagcaagttccggttctccag
caaaatctggcagctcggcagcaacagcagcaggtcttccagcaggcagttggtgccggc
ggtcttcaacctccaagttcaccttatgatgaggcagagctcgatgctcttgctgaaatt
gaaaggatagaacgagaggcagctagtgagaagtgttccaaggaggtgcaagataaagac
aagccactgaagaaacgaaaacaggactcttttccccttgaaccaggtgccggaggaccg
ggtggtcccactggtgccccaggcagtggatcaacaggaggtggcaatgctggcaaactg
acaccacaggaggccaccgcagctgggaatggtgccagtcgccctcccctcatggtgagc
atcgatctccagcaggcagggagagctgatggccagctcgacccatgtctggctgcccct
attcctgcccttgaggcccaacgctggcctgaagaaccagctagtggggcagcagctgtg
gagggttccgacacggctttgcggttaaaaccagatggacgaccggaagtcattaagaac
agtgttgataaacatgacagtaggagagaaggccgggactcatccaagcaccgacatcat
gaaaagtcctcagacagacgtggagaaatgccaaagtcatcgagtcgaggggagcatgga
cgagacagagaccgtgaatctgaaagagataggaggcatcggagtgagactggcagtcga
gacagacggtcccctgattctcgctctcgaggtgatcgagataggtctggtttccagacc
tcttccatgggagagcctggtcgaagcaacagtagacaagatggttccaaattggcctca
tctgcctcgggtcctaaaattccagattccttccctgctcagctcctgggaggacatacc
ggagcgctgaagaacttccagatccctaagattaaccgtgacagggagagcagtgggtca
ggcgaaggtcaaatttggggccagccaaaggttaaactggagagactgggtttggtgaaa
gactttgagaagcgacccaaacctgtggtggttctaaaaaagctctcagttgaccagatt
cagaggatcattcgacacagcaaatctgggaaaaacaggttctcctcaggaaggtctagc
aaaggtgagatggacccagcaattctgaaagaacttcccccagagttgctggcagagatc
gagtcaaccatgcctttgtgtgaaagggtaaagatgaacaagaggaagcgaagcactgta
aatgagaggcccaaatatgctgaagtcagctcagatgaggactttgaggcaaatggagag
tcggcaaggaagcgtcacaggcgagacaaagacagaacttgggagtttgaagaacgcgag
cgacggggttcaggggaacaccggaaaagtgggcaccgagacagccggcgaggctcaggg
agccgctatcgtgattcctctgatgaagactcaccaccacccagcatgagtgaaattgcc
agaaaaatgaagatgaaggagaagcagaagaaaaggaaagcatatgaacccaaactgacc
caagaagagctaatggactcatccacgttcaagaggttctcagcaagcattgacaacata
ctagaaaatctggaggatgttgatttcactaccatggcagatgacgatgagatacctcag
gaattgctgctcggtaaacaccagttgaatgagctgggcagtgaatcagccaaaattaag
gccatgggcatcacaagcaggatcccatcagacaagttggtgaagctcctgaacatccta
gaaaagaacattcaggatggatccaagctctctactatgatgaatcatgaccaagatgct
gaagacgaggaaagactttggagagatctaattatggaaagagtcacaaaatcagcagac
gcctgtctgacagctcttaatgtcatgacctcaacacgcatgccaaaggcagtctacatt
gaagacgtcatcgagcgggttctacagtacaccaagtttcaccttcagaacaccttgtac
cctcagtatgatcctgtctacagggtggacccacacggaggtggcatgttgagctccagg
gcaaagcgtgcaaaatgctccacacataagcagcgtgtcattgtaatgttgtacaacaaa
atttgtgacattgtcagcaacatttcagagctcctagaaatccaactgcttacagacacc
accatccttcaggtttcttctatgggaatcaccccattttttgtggaraacgtcagtgag
ctgcagttgtgtgccattaaattagtcacaatggttttctcacgttacgagaarcatcgg
cagcttatcttggaggaaatctttacctctttggcaagactacccaccagcaaacgctct
ctcagaaacttcagactaaacagctcagaccaggatggagaaccgatgtacattcagatg
gtaacagctctkgtgctgcagttaatccagtgtgtggtccatcttcccaatgacaaggat
atttttgaagagtatgacaacaaggtggaccaggatgtcttgataacaaactcttacgag
acggcaatgagaacagcacaaaacttcctctcggtcttcctcaaaaagtgtggcagcaag
cagggagaagaagattatcgaccattatttgagaattttgtccaggacctgctgtcaaca
gtgaacaaaccagagtggcctgctgcagagttgttgctcagtctgcttggtagactcctg
gtgcaccagttcagtaataaacagacagaaatggctctgagagtagcatctttagactac
cttggcacagtcgctgcccgtctgaggaaggacgcagtcacaagcaagatggaccagaga
tccattgatcgtatcctagaagagtctcaaggcactgatgagacccagcagctgcagaag
gctttactggactatatggaagagaatgctgagactgayccatckcttgtgtttgccaga
aagttttatattgcgcagtggttccgtgatgctacaacagaggccgagaagtccatgcgg
aaccagaatccaaaagatgaggactcgtcagacggaccacagcacgcgaaagagatagaa
actactggtgaaatcatgcagcgtgcagagaaacgcaagaagtttctacgcaacatcatc
aagacttcgccggctcattttgccacattgaaaatgaactctgacactgtggactacgac
gactcctgtctgattgtgcgttatttggcctctatgaggccgttcgcccagagctttgat
atttatttaacacagatcttgcgagttcttggggaaagtgccatcgctgtaagaactaaa
gccatgaaatgtctgtctgaggttgtggctgtggaccccagcatactggcaaggtctgac
atgcagcgaggcgttcatggtcgtttgatggacaactctaccagtgtgagagaggcagct
gtggagctgctgggcaagtttgtgctcagcagaccccaactcactgaacagtactacgac
atgctcatagagaggatactggacactggtatcagtgtaagaaagcgggtgatcaagatt
ctcagagatatctgtctggagcaaccgaccttcagtaagattactgagatgtgtgtgaag
atgattcgcagggtcaacgacgaggaaggcatcaagaaattggtgaatgaaacattccag
aagttgtggtttactccaactccagcacacgacaaagagaccatgacaagaaaaattctc
aacatcactgatgttgttgcagcatgtcgagacactggttacgactggtttgagcaactt
ctccaaaatctccttaaatctgaagaggatgcatcgtataaaccagctaaaaaggcatgt
gttcagctagttgataatctggtggagcacatccttaaatacgaagagtctcttgcagaa
aacaagggggtgaactcaacgcggctggtagcatgcatcaccactttgtacttgttcagy
aagatcagagcccagttaatggtgaaacatgccatgaccatgcagccctatctgaccacr
aagtgtaacactgccaatgacttcatggttatttgtaacgtggcaaagatcttggagctc
gtggtgcctttgatggagcatccaagtgaaactttcctcgccaccattgaagaagacctc
atgaagctcatcatcaaatatggcatgacggtggttcagcactgtgtaagctgtcttgga
gctgttgtaaacaaagtcacacacaactacaagtttgtctgggcttgcttccacaaattc
tatggtgcacttaacaaacttaaaattcagcatcaagaggatcccaacagcacgacatta
gtcgcaaataagcctttccttctgcgatcgctattcactgtgggtgcactggctcgacac
tttgattttgatctggaggagtttaaaggccccaacaaggttgttatcaaggaaaaggtt
cttgagctgctgctgtactttaccaaacacgaggatgaggaagtcaagaccaaagccatc
attggcttaggttttcttgtcatcatgcatcccagccagatgttcgtgcctgaggtcaag
tcattgtacaatgggattctggcagacggcttgtcctccatcaatctaaaaatccaggtc
ctcaaaaacctgcagacgtaccttcaggaagaagacacacggatgcaggaagcagacaga
gaatggaagaaactgtcaaagcaagaggatctgaaagagatgggagacatttcttcaggg
atgagcagctccataatgcagctttatctaaaacaagtgttggaggcattttttcacact
cagtccagcgtacgacactttgctctcaacgtcatagctctcacactcaaccagggtctt
atccatcctgtacagtgtgtaccctacctcattgcaatgggaacagacccagagcccagc
atgaggaacaaagctgatcaacagctggtggaaatagacaagaaatacacaggattcatc
catatgaaggcagtggctgggatgaagatgtcatacaatttgcagcaggccatcgcttca
tctcgcaaatccataataagaggcttcagacaagatgagacccactcggcgctctgctcc
cacctctattctatgatccgggggaaccggcagcatcggcgggcttttctcatctcatta
ctgaacctctttgatgacagtgccaggacagaagtcaatatgctgctgtttatcgcagac
aacctggcttgttttccataccagagccaggaagagccactcttcatcatgcaccacata
gacatcacactgtctgtttctggcagcaaccttttgcaaactttcagagagctacttcta
aaggagccgaggcgcaaagaaaagaaagtgaaggagtggaagcaagcgtctgatggggaa
gacgaagaggaaaagatgaactgtgattcttctaggagtgatgaagaagagaagagcaac
agtgaggacgatgaaaacgatgaagatgatgtggtacggcggccaaagaagacaagaaaa
ccagttcaaacctcagacagctcggactctgagtctgatttggatgatttggatgtggag
gatgtggacaaagtgatgagacttcttccagacaatcccacaggtctcttggactttgcc
aaygctgttcagggcatcctacttctgctcgttctcaagcaacatcttaagaaccaatat
ggattctctgacagtaaaattcagaagtactctccaactgagtcagccaaggtgtacgat
aagactgtgaacagaaaaagcaacattcatttcaaccctcgacaaaccatggacttcatc
tccaacaacattgctcacgccacactgtcagaggatgtaaaaaggaggatagtcaaacag
tacttagactttaaggttctgatggaacatctggatccagatgaagaggatgaggaggga
gaagcatctgccagcgccaacatcagaaacaaagccataaacgccctattaggaagctca
ggccccttgtcgggtcctagtccgcgcaatcaggcgggaccagaaactgatgacgacgac
agtgatatcgacgaaaggactccagggtcatctcgaaggtcaaggagagcgggtgattcc
tcagatccaggccgcatgagcgagatagtggaatcaatggatgtgatcgccctctgctgc
cccaaatacaaagaccgaccacagatagctcgagtcatccagaaaacttccatcggatac
agcatccactggatggcgggctcctattcggggccctgggcagaggccaagaaacgcgat
ggacgcaaactagtgccttgggtggacactattaaggagtcagacatcatttacaagaag
attgccttgaccagcaaccacaaactgagcaacaaagttgtacagactttacgctcacta
tatgcagcgcgggaaggaggggctagctaa
DBGET
integrated database retrieval system
