Austrofundulus limnaeus (annual killifish): 106526231
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Entry
106526231 CDS
T06063
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106526231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alim04990
]
106526231
Domain-containing proteins not elsewhere classified [BR:
alim04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106526231
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
106526231
NCBI-ProteinID:
XP_013876243
UniProt:
A0A2I4C8C1
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSSNYSVTLLSPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGIAVGDMVLSIDGISTE
GMNHLEAQNKIKNCAGNLSLTLQKTSSVCKPPPVAPKGDRADIIKPVAITHPSPPHHPQP
HCSVPYNKVPRPYGGCPSQSDCPPPPFTTVIPSPSSAFTPASSHGPLPPPRPPSPPPFSY
PSSASSSSSPTVLVPPQPSVYNTPIHLYSAENACEVAMGQMRGLLESQGGIVPLQFNGGP
QNVFKKPLQQPPRAPRKHVVDTDIHFYHVPTHADASRKRIMEDTEDWRPRTGTTQSRSFK
ILAQITGTENVQNEEADSAKKTNEGAEEPGLSSHESAVVKTMIKGAAPKYGQGLITPSFG
MKGNTSSVSRSPVPPRPVPQAHPKDEDTLVQMAEHFPAGMRTPMCAHCNMVIRGPFLVAM
GKSWHKEEFNCAHCRSSLADVGFVEEKGCVYCEHCYEEFFAPTCSRCRAKILGEVINALK
QTWHVYCFLCAACQQPIRNNTFHLEDGEPYCEQDFYSLFGTGCHGCEFPIEAGDKFLEAL
GYTWHDTCFVCAVCCATLEGQTFFSRKDKPLCKKHAHSVKI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagtgtcactctgttaagccccgccccctggggcttcaggctacaa
ggagggaaggacttcaacatgcctctcaccatctccaggctgacagatggtgggaaagca
gctaaaggtgggattgctgtgggagacatggttctctccattgatggcatttcaacagag
ggcatgaaccacctggaggctcagaacaaaatcaagaactgtgccggcaacctcagcctc
actctgcagaagacctccagtgtttgtaaaccccctcctgtggccccaaagggcgacaga
gcagacatcattaaaccagtagccatcacccatccatctcctccacatcacccccagcct
cattgctctgtcccctacaacaaggtccccagaccttatgggggctgtccgtcacagagt
gactgccctcccccacctttcaccaccgtcatcccttccccatcctcggccttcactccc
gcctcctcccatggtcctcttcctcctcctcggcccccatccccacctccgttctcttac
ccgtcctctgcctcctcctcctcctccccaacggtcctggttccaccccagccgtcagtg
tataacacgccgatccacctgtactctgctgagaatgcatgtgaggtggccatggggcag
atgcggggcctgttggagagtcagggtggaatcgtaccgcttcagtttaacggtggacct
caaaatgtatttaaaaaacctctgcagcaaccaccaagagctcccagaaaacatgttgtg
gacacagacatccatttttatcacgtgcccactcacgccgatgccagcagaaagcgcata
atggaggacacagaggactggcgtccacgcaccggcaccacccagtccaggtccttcaag
attctggctcagatcaccggcaccgagaacgttcaaaatgaggaagctgactcagccaag
aagacaaatgagggtgctgaggagcctggactcagctcccatgagtctgcagttgtcaag
actatgatcaaaggagctgctccgaaatacggccaaggtttgatcaccccttcttttgga
atgaagggtaacaccagttctgtctcgaggagtcctgtaccaccccgacctgtgcctcag
gctcaccctaaggatgaggacacgctggtccagatggcagaacattttcctgctgggatg
cgaactcccatgtgtgcccactgcaacatggtcatcagaggaccatttttggttgcaatg
gggaaatcgtggcacaaagaggaatttaactgcgcccactgccgcagttccctggccgat
gtaggctttgtggaagaaaagggatgtgtgtactgtgaacactgctatgaagagttcttt
gctccgacttgcagccgctgccgggccaagatactgggggaagtgataaatgccctcaaa
caaacatggcatgtctactgcttcctgtgtgctgcctgtcagcagccaatcagaaacaac
actttccacctggaggatggagagccttactgygagcaagacttttacagtttgtttggg
actggttgccatggctgtgagtttcccatcgaggctggggataaattcttagaggcactt
ggttacacctggcatgacacctgctttgtttgtgctgtgtgctgtgccactctagagggc
cagaccttcttttcgaggaaggataaacctctttgcaagaagcacgctcactcagtgaag
atatga
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