Austrofundulus limnaeus (annual killifish): 106526322
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Entry
106526322 CDS
T06063
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106526322
04020 Calcium signaling pathway
106526322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106526322
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106526322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
106526322
NCBI-ProteinID:
XP_013876356
UniProt:
A0A2I4C8N7
LinkDB
All DBs
Position
Unknown
AA seq
2352 aa
AA seq
DB search
MTTEECPVPLGIISSAVPGQDEEYSSAQADDIIEEVGPGDDVSIGSDLSTLVLPFPELAP
VVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVIKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYPEENFTVPSGMTLPAPYYRPEEDDERPFICSLASDNGIMSCTDVPARREGGRICCL
DKEDALHRQALGLSPEPLSNGSGAGEALGLCINWNQYYTRCHTGSTNPHKGAINFDNIVY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASMTEPGDCYEEIFQLICHVLRKAKRRSTALYYTLRGKPP
PAIAGRGNRRGVGNVNGEQHHFRQPRPTKCPHHSKSDHSSQTQTNSISLSVPENPEDCPI
CALSLKEGARTVGNSAKGEDSEGDAVKETDKEEDHLEEKEDGKRKKRRTCFGHCKALWTN
IRRKLWGIVESKYFSRGIMIAILINTISMGIEHHDQPAELTNVLEICNIVFTSMFTLEMF
LKLTAFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPAL
RRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLL
WAIVTVFQILTQEDWNMVLYNGMASTSPFAALYFVALMTFGNYVLFNLLVAILVEGFQAE
GDANRSYSDDDRSSCNFEENDKQKDSLHLSDPKICTLTPNGHLDPSMLPAGLFPGEKLTF
ALGSRKNSVISLGRADLEKRAMYPGRGYHNWGRPLPPQPHPLWARRSSWSSLGGRPCSSS
SPTTSPGFTPTTARPFYGYGHGGFGQVVGGSLRIRGPRASSSSQHHHLHHIHPDEEESLL
APPAVAPHCFQLPPPKIHGCFAPHRDRRALSLELPHVLQVPAGPQDPHHLLHHRKKSLSG
GLVISSSSDLERVYQDCNGKTPLSHLQPPLRRQTQQTKRENPESHLISDVFPQVNARSKD
KEDLDDDIEYSLCFRIQKMLEAYRPDWCETREDWSVFLFSPQNKFRLMCQSIIAHKLFDY
VVLVFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMGFYIGEQA
YLRSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVV
ETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDVKNITNKSDCLRANYKW
VHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVTNNNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYYSSYGNM
RLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPHSLDLALKYCNYFFTSMFVLEAVL
KLIAFGFRRFFKDRWNQLDLAIVLLSLMGITLEEIEISAALPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMS
RHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDNHPDVDYACNPSLQFISPMYFV
SFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPGCGGGG
VDKGLLPVGSVPGGPAGRKERGGSRGDKGEGVRRLQHAVTSARMGPYHSCDSNRSSYSPA
QESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPVCKNCKGQQQEQIRMAEIEQ
ASLKSEQLSDKSSSPALPDDLSLDEHTIYQLLSQEGKGRCSSGSQSSEDAGEEGCHNGAH
QTQKAGQVQVQGQSLQSKAPSTGTETETVLQEVEMQTYQQHKCSPQCRPDGAVSSINKER
CKEEEEGGGGASGISNLFHLPTEFFHSSGAAISIPSRSRSLRLTRSLRLTSPSSWASFRS
HGAHRKMLCAQYPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPQNLDLPTASLSXLSPL
SQPEDGMTISSSVQARKPRPTPQSTVTLLATRGHQRSQSSGRGSTSPGYNREDSIDPSDE
DLGIGIGSSIGGCGSSQAGNSEHLSETMSSLSLTSLLLPNSLVCLGVPVKKCNSTGSLDK
GGMLLSSRGREVHREILGLELMDPQGFLANPWTGVLVDTRRGGGRGEIEDGAHGLKGKSS
SQTTVGSCRKNR
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaggagtgtcctgtgccactggggatcatttcctcagcagtgccagggcag
gacgaggagtacagctcggcacaggctgatgacatcattgaggaagtgggtccgggcgat
gatgtcagcattggcagtgacctgagcactctggtgttgccctttcccgagctggcgccc
gtggtcttcttctgtctcaagcagaccacctgtccacgcaactggtgcatccgcatggtt
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacgctg
ggaatgtaccagccctgcgagaacatcgactgcacctcggaccgctgccagattctgcag
gccttcgatgcatttatctacatcttctttgcactggagatggtgataaagatggtggct
ctggggatctttggtcgtcgctgttacctgggagacacctggaaccggctggactttttc
atcgtcatggctgggatggtagaatactcactggacctgcagaacatcaacctgtcggcc
attcgaacagttcgagttcttcgaccgctgaaagccatcaacagagtcccaagcatgcgg
atcctggtgaacctgctgcttgacactctacccatgctgggcaacgtgctgctgctctgc
ttcttcgtcttcttcatctttggcatcatcggcgtgcagttatgggcggggctactgaga
aaccgctgctaccctgaggagaacttcaccgttccttcaggtatgactctgccagctcca
tactaccgaccggaggaagacgatgagcgccccttcatctgctccctcgcttcggacaat
ggcatcatgtcgtgtactgacgtgccagcaagacgtgaagggggacgcatttgttgtcta
gacaaagaagatgctctgcacaggcaggctctgggtctgagtcctgagcctctgtccaat
ggcagcggtgctggtgaggcgctgggtctgtgcatcaactggaatcagtattacactcgg
tgccacacgggaagtactaaccctcacaaaggagccatcaactttgacaacattgtttac
gcctggattgtcatttttcaggtgatcacgttagagggctgggttgagatcatgtactac
gtgatggatgcccattccttttacaacttcatctacttcatcttactcatcatcattggt
tcattcttcatgatcaacctgtgcctggtggttatcgccacccagttctcagagaccaaa
cagcgggaacaccagctgatgcaggagcagagggcacagtgcctgtcctcctccaccttg
gccagcatgactgagccaggagattgttacgaagagatcttccagctcatctgccacgtc
cttcgcaaggcgaagaggaggtcaacagccctctactacactctaaggggcaagcccccg
ccggctattgcaggcagggggaacaggagaggygtggggaacgttaatggagagcagcat
catttcaggcagccacgaccaaccaaatgtccacaccacagcaaaagtgatcacagctca
cagacacagaccaactccatcagtctgtctgtcccagagaaccctgaggactgtcctatc
tgtgcattatctttgaaagaaggagccaggactgtgggaaattcagctaaaggggaagac
agcgaaggggatgctgtgaaggaaacagacaaagaggaggaccacttagaggagaaggaa
gatgggaaaaggaagaagaggaggacatgttttggacattgtaaggctctttggacaaat
ataaggaggaaactttggggcattgtggagagcaagtacttcagcagaggcatcatgatc
gctattctcataaataccatcagcatgggcattgagcatcatgaccagcctgcggagctg
accaacgtcttggagatctgtaacatcgtcttcaccagcatgttcaccctggagatgttc
ctgaagctcacggcttttggcttctttgagtacttgaggaacccgtacaacatctttgat
ggcatcattgtcatcatcagcgtgtgcgagatcatcggccaggcagatggcggtctgtca
gtgctgaggacattcaggctgctgagggtcattaagctggtgaggttcatgcctgcgctg
agacggcagcttgtcgtgctgatgaagaccatggacaatgtggccaccttctgtatgctg
ctcatgctcttcatcttcattttcagcatcctggggatgcacatatttggctgcaagttc
agtttgaagacggaggcaggagacacggtacctgacaggaagaactttgactccttgctt
tgggccatcgtcactgtcttccagattctgactcaggaagactggaacatggtgctgtac
aacggcatggcgtccacttctccctttgctgctctctactttgtagctctgatgacgttt
ggaaactatgtgctctttaatttgctggttgccatcttagttgaaggtttccaagctgag
ggcgatgcaaaccgctcctactcggacgatgacaggtcttcctgtaattttgaggaaaac
gacaagcaaaaagactccctgcacctctcagacccaaagatttgtaccctgactccgaat
gggcatctagacccttcaatgttgcctgctggtctgtttcctggagagaaattgaccttc
gcgcttggctcaagaaagaatagtgtcatttctctgggcagggctgacctggagaagagg
gctatgtatccaggtcgaggttaccacaactgggggcgcccactccctccccagcctcac
cccctgtgggcccgccgttccagctggagtagcctgggaggtcgcccctgctcctcctcg
tctcccaccaccagccccggcttcactcccactaccgcaaggcccttctacggctatggc
cacggggggttcggacaggtcgtcggaggaagcctgcgcatccgcggtcctcgtgcctcc
tcatcctctcagcatcaccacctccatcacatccacccagatgaagaggagtcactactc
gctccccctgccgttgctccccactgttttcagctgccccctccgaagattcacgggtgc
tttgctcctcatagggaccgcagagctctttcactggagctcccccatgtgctgcaggtt
ccagccggaccccaagatccacatcacttgctgcaccacaggaaaaaaagtctctctggg
gggctggttattagcagcagcagcgacttagaaagagtttaccaggactgcaacgggaag
acccctctgtctcacctacagccgcctttgagacggcagacgcagcagactaaaagggag
aacccagagagccacctgataagtgatgtcttcccccaggttaatgcacgcagcaaggac
aaggaggacctggatgatgacattgaatatagtttgtgcttccgcatccagaagatgtta
gaagcatacagaccggactggtgtgagacaagagaggactggtccgtcttccttttctct
cctcagaacaagttcagactgatgtgccagtccatcattgcccataagctgtttgattat
gtggttttggtcttcatcttctccaactgcatcactgttgctctggagaggcccaagatc
ctgcagggcagcctggaacgagtctttctcaccatctccaactacatctttacagccatt
tttgtgggcgagatgactctcaaggttgtttccatgggtttttatataggcgaacaggct
tacctacggagcagctggaacgttctggatgggttcttggtttttgtgtctttaattgat
attgtcgtgtccatggcgggaggggcaaaaatcctgggtgtgctccgggttctgcggctt
ctcagaacactacgacccctcagagtaataagcagagctccagggctgaagctggtggtg
gagactctcattacgtctctaaaacctattggcaacattgtcctgatctgctgtgcgttc
ttcatcatctttgggatcctcggagttcagttatttaaaggcaaatttttttactgcctc
ggccctgatgttaaaaacatcaccaacaagtctgactgtctgcgagccaactacaagtgg
gtccatcataagtacaactttgacaacttgggacaggccctgatgtccctgtttgtcctc
gcctccaaagatggatgggtcaacatcatgtaccatggcttggatgcagtgggtgtggac
caacagccggtaaccaacaacaacccatggatgctgctgtatttcatctccttcctcctc
atcgtcagcttctttgtcctgaacatgtttgtcggggtggtggtggaaaacttccacaag
tgccgccagcaccaggaggtggaggaggccaagaggcgcgaggagaagcgtcaacggcgc
atggagaaaaagaggaggaaggctcagaagctgccttactactccagctatggcaacatg
cgcctgatgatccacacactctgcacaaaccactacctggacctcattataaccttcatc
atctgcatcaatgtgatcaccatgtccctggagcactacaatcaacctcactctttggat
ctcgccctgaagtactgcaactatttcttcacctccatgtttgtgttggaggctgtacta
aaactcatcgcctttggatttcgacgcttcttcaaagacaggtggaaccaactggacctg
gccatcgtgctcctgtcattgatgggcatcactctagaggagattgagatcagtgccgcc
ctgcccatcaaccccactatcatcaggatcatgagggtgctgagaatagcccgagtgctg
aagctgctgaagatggcaacgggaatgagagccttgttggatacggtggttcaagccctg
cctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatctacgccgcctta
ggagtagagctttttggagaacttgtttgcaatgaagactatccatgtgaaggtatgagt
cgtcacgctacctttgaaaactttggcatggccttccttactttgtttcaagtctctacg
ggcgacaactggaatggcatcatgaaggacacattgcgggagtgcccaccagacaatcac
cctgacgtggactatgcctgcaatccgagccttcagtttatctcgcccatgtactttgtc
tcctttgtgctcaccgcccagtttgtgctcatcaatgtggtggtggccgtgctgatgaag
cacctggacgactccaacaaggaggcccaagaggaggcggagatggatgcagaaattgag
ctggagctggcccagggcaccctctgttgcatgggtgcccccggttgcgggggtgggggg
gtggacaaaggactgcttcctgtcggatcggttcctggaggcccagcagggaggaaggag
agaggaggctcccgaggggacaagggagaaggagtgaggaggttgcagcatgcrgtaact
agtgcgcgcatgggaccataccactcctgtgactccaaccggtcatcgtactctccagca
caagagagccagtggttggacagcgtatctctcctaatcaaggacacgttagagggggag
atgctgatgatcgacaacctctccggttctgtcttccaccactactcctctccgccgcct
gtctgcaaaaactgcaagggccagcagcaagagcagatcagaatggcagagattgagcag
gcgtcgctgaagtcggagcaactctcagacaaatcctcgtctcctgctttgcccgacgac
ctcagcctggacgaacatacaatctatcagctgttgtcccaggaaggaaagggaagatgc
agtagtggctcccaaagctctgaagatgccggtgaagaaggatgycataacggagctcac
cagactcagaaagcagggcaggtccaggtgcaggggcagagcctgcaaagcaaagcccca
agcactggtactgagacggagactgtgctgcaagaggtggaaatgcaaacataccaacaa
cataagtgctcacctcagtgcaggcctgacggtgcggtttccagcatcaataaggaaaga
tgtaaagaagaagaagaaggaggaggaggagccagtggtatttcaaacctcttccatctg
cctacagagttcttccactcttcaggtgcagccatctcgattccttcccgcagtaggagc
ctacgcttgaccaggagccttagactgacctccccatcctcctgggcctcattccgctcc
catggagctcatagaaagatgctctgtgcacagtatccatctcacagtgactcatcactt
gctactggaagctctgaaggcagccttcagaccaccctggaagaaggactgagcttcagt
gtctctccaccgcaaaacttggatttgccaacagcttccttatcastcctttcgcctctc
tcacagcctgaagatggaatgaccatttcttcttcagttcaggcccgaaagccaaggcca
accccccagtccactgtgacccttctggccaccaggggtcaccagcggagccagagcagc
ggacgaggcagcactagcccaggctacaaccgtgaagactcaattgacccctcagatgag
gacttgggcataggcatcgggtcgtctatcggtggttgtggctccagtcaagcgggaaac
agtgaacacttgtcagagacaatgagcagcttgtccttgacatcactgctgttgcccaac
tctctcgtgtgccttggagtgccagtaaaaaagtgcaacagcacaggtagccttgacaaa
ggggggatgctgctgtcttcccggggcagggaggtccatagagagattttgggcctggag
cttatggacccccagggcttcttggccaacccttggacaggagtattagtagataccagg
agaggaggaggaagaggggaaattgaggatggagcgcatggtttgaaaggaaagagctca
agccaaacaacagtagggtcttgtcgaaaaaatagatga
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integrated database retrieval system
