Austrofundulus limnaeus (annual killifish): 106526422
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Entry
106526422 CDS
T06063
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106526422 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106526422 (poln)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106526422 (poln)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
106526422 (poln)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
PT8
Motif
Other DBs
NCBI-GeneID:
106526422
NCBI-ProteinID:
XP_013876482
UniProt:
A0A2I4C901
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MEYTGPLSQAALKVLAXLRAQNLDKTRDNQRFSSYQRQMGRCNYNNAESEVERKDSHQVS
FSSSNELPSSQTSVSHQYSLTPTPPSSQPSSCWFPPQTAAYYCQTTSNRIIYDGPAYPSS
PTLSFSQQKSPDTQDMYSVSLQIPDRHAEHQDTPCRTSGCIGSSFIPHTFPDKEGLNEMF
KPPTKEPNSHSEACHTPSSWPEVCEETVNTSGAQREDKTSWSVERNEPEDASRSRITSKL
SERMAREANESNSQPLSDFVVKYIDHTVAEIVEKDQTEGLVVQSELPQLKLEHNKDPNMD
VTVEGAIDSEKMDVGQLHCSDIHQKERQCETSLKENTEARQRGEDREVLEVALRGGEEKV
NSTDEKQCPMPRSSENCGARQPGFKPPCLLGSQEHHDKITHESSRGSKPSISLIPASKLP
TELNSYSPQKAVPPGGGLNNELETKILPASQSHTHHHPFTPPFSRKRKHDIFQHQPTNPP
PKTCQIRRPLKWQPPYSSQEKVAEEVSESKKARLENLALLRESLMKIDPCVRSDPDNQKQ
TQQSWEFKSKKTCAETSKTASKQTLHSKTCKDTWAKFRTDFSTDGTRGFLDGINGSEPQN
QSKTGSHPTSLTSDSRVKDSGQLTPEEKLQVLEETEGAKVVLLTLVFRDGTTQLDPEQKV
APAVCGLLVLMKKDLSSSTPENALSPQDSLVYLKLEHAPLWAHQHTHHSQELFTRDLLLR
VLSKSQLLVSYKAKDLLRTALQYCKDDLSWKQVAGCQIQDPQVSGWLLDPTDPSSCYSNL
LYKHCQKTYTASVPGSQKVSQIISSLNWLYKLHLNLCAKLQSQHLWDLYSEMELRMIPVL
AAMESHHIHVDKEALKRTSELLGAKMKQLEQEAHRAAGQIFLLTSNSQLRIVLFEKLRLH
ERCENKRLPKTVNKQQQSTSEAALLQLQDLHPLPKIILEYRQIHKIKSTFVDGILSCMKS
KNYISSTWYQTSVVTGRISAKHPNFQALPRQPLQICKMQYIQGKEEEVVAVHPRAMFIPQ
EGWTFLAADFCQVELRLLAHFSSDPELLRVFTNPQADVFTMLASQWKGISSDXVTSEDRE
HAKRIVYSVVYGAGRERLSGILGVSAEQASKFQNSFLQTFKEVQTFIQKTIQQSHKQGYV
LSVMGRRRNLPNINSVDWATRMQAERQAVNFVVQGSAADLCKMAMIRIFNLVSSSDSPSA
RLLAQLHDELLYEVKDSQVEQFAALVRSIMESLQHIDHLGVHLKKGTSTDSVVKGNNVSI
PLQSQDVGSM
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggagtacacaggccctctctcccaggctgcactgaaggttctggctgktctacgtgcc
caaaatctggacaaaaccagagacaaccaacgtttctccagttaccagaggcaaatgggg
aggtgtaattacaacaatgcagagtctgaagtggaaagaaaagacagccaccaggtatca
ttttcctcctccaatgagctgccgagctctcagacatcagtctcccatcagtactctctg
acaccgacccccccttcatcccagccctcctcctgctggttccctcctcagacggcagcc
tattattgccagactacctctaacagaatcatctatgatggtcctgcttacccgtccagc
cccactctctcgttctcccagcaaaagagccctgacacacaggacatgtattctgtgtcc
cttcaaatacctgacaggcatgctgaacatcaagatacaccatgcagaacttctggatgt
atagggtcgtctttcatccctcacacattcccagacaaagaaggcctcaatgagatgttt
aaacctccaaccaaagagcctaattcccactctgaagcttgtcacacaccatcatcctgg
cctgaagtgtgcgaagagacagttaacacatcaggagcacaacgtgaagacaaaacttcc
tggagtgttgagcgaaacgaaccagaagacgcttcaagaagcagaataacgtcgaaactc
tctgaaaggatggctagagaggcgaacgagtctaacagccagcctcttagtgactttgta
gttaaatacattgatcatactgtggctgaaatagtggaaaaggaccaaacagagggacta
gtggtccagtccgaactcccacagcttaaactggagcacaacaaggatcctaacatggac
gtcacagtggaaggtgccatagacagtgaaaaaatggatgtaggacagcttcactgctct
gacatccatcaaaaagagagacagtgtgagacaagtctgaaagaaaacacagaggcaaga
caaagaggagaggacagagaggtgctggaagtggcccttagaggtggcgaagaaaaggtt
aactctactgatgaaaagcagtgtcccatgccaagatcgtcagaaaattgtggagcaaga
caaccagggttcaaacctccctgtctgcttggcagccaggagcatcatgacaaaatcact
catgaaagcagcagagggagcaaaccaagcatttcacttatcccagcaagcaaacttcct
actgaactaaactcctactcacctcagaaagcagtccctcctggtggagggctgaacaac
gaactggaaacaaaaatcctacctgcttcccaaagtcacacacatcatcatcccttcact
ccacccttctcgcgaaagaggaaacacgacatatttcagcaccaacccacaaaccctcct
cccaaaacctgccaaattagacgtcccctgaaatggcagccaccttattcttcacaagag
aaggtggcagaagaagtgagtgagtcgaagaaagccaggctggaaaacttggctttactt
agagaatccctgatgaaaattgatccgtgtgttcgttcagatccagataatcagaagcaa
actcaacaaagttgggagttcaaatcgaaaaaaacgtgtgctgaaacgtcaaagactgct
tctaaacagactcttcattccaaaacgtgtaaagacacgtgggccaaatttaggactgac
ttttccacagatgggaccagaggttttcttgatggaattaacggtagcgagccacaaaat
caatctaaaactggctcccaccctacctccctaacatctgactccagggtgaaggattct
ggtcaactaaccccagaggagaagctgcaggttcttgaggagaccgaaggggccaaggtg
gtgttgctaaccttggtgtttcgagayggaaccactcagttagacccagaacagaaggtc
gctcctgcagtgtgtggcctccttgtcctgatgaagaaggatctttccagcagcacacct
gagaacgcgctcagtccacaagacagtctggtttatctaaaactggagcacgcccccctc
tgggcccaccagcacactcaccacagccaggagctcttcaccagagatttgcttctacga
gtcttatccaaatcccagctgctggtttcttataaagccaaggatttgcttcgtacagct
ctgcagtattgcaaagatgacctcagctggaaacaagtggcaggttgtcagattcaggac
ccacaggtttcagggtggctgctggatcccacagatccttcttcttgctatagtaatctt
ctgtataagcactgtcaaaaaacatatacagcatctgtcccgggttctcagaaggtttct
cagatcatctctagtctcaactggctctacaagcttcatttgaacctctgtgctaaacta
cagagccagcacctgtgggacctctactcagagatggaactgagaatgatcccggttctg
gcagccatggaaagtcaccacatccatgtggacaaagaagctctgaagagaacttcagaa
ctccttggggctaaaatgaaacagctggagcaggaggcccacagagcagctggacaaata
tttctgttgaccagcaactctcagcttcgaatagttctgtttgagaagctgcgtctccac
gagcgctgtgagaacaagaggcttcccaagaccgtcaacaagcagcaacagtcaacatca
gaagctgcactgctgcagcttcaggaccttcaccctctgccaaagatcattctggagtac
agacagattcacaagatcaaatctacttttgttgacgggatcctctcatgcatgaagagc
aagaactacatttcctctacttggtaccagacgagtgttgtgactggacgaatctcagcc
aaacacccaaactttcaagccctgccgagrcagccgcttcaaatctgcaagatgcagtac
atccaaggaaaagaggaggaagttgtggctgttcatcctcgagccatgttcatcccacag
gaaggctggacttttcttgccgcagacttctgtcaagtggagctgcgtctgctggctcac
ttttcctcagacccggagctgctgcgcgtttttaccaacccacaggctgacgtcttcacc
atgctggcctctcagtggaaagggataagttcagacgwtgtgacctctgaagacagggaa
catgcgaaacgcattgtgtactctgtggtatatggagcaggtcgtgaacgtttgtcgggg
atattgggggtgagcgctgagcaagcgagtaaattccagaacagcttcctgcagaccttc
aaagaagtccagacctttattcagaagaccatacagcagagccacaaacagggttatgtg
ctgtctgtcatgggtcgtcgccggaacctccctaacatcaactctgtggactgggctacc
cgcatgcaggctgaaaggcaggccgtcaactttgttgttcagggttcagctgctgatctc
tgtaagatggccatgatcaggatctttaacctggtctcctcctcagactcaccctctgcc
aggcttctagcacaactacatgatgagcttctttatgaagtgaaggactcccaggtggag
cagtttgcagctctggtgagaagcatcatggagtccctgcagcacatcgatcacctggga
gtccatcttaaaaaaggtacgtctacggactcagttgtcaagggcaacaatgtgagcatc
cccctgcaatctcaagatgtaggctcgatgtga
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