Austrofundulus limnaeus (annual killifish): 106526665
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Entry
106526665 CDS
T06063
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106526665 (shprh)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106526665 (shprh)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106526665 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
PHD_2
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
106526665
NCBI-ProteinID:
XP_013876759
UniProt:
A0A2I4C9T8
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MSSKRKRVPPVRVDEEAKRRLEWNMMENRKNEVIQEDELTPDARSVPPTDTTPSSSFFSI
TEDVNEAACSRSVQFSDELPSTSSACASASLSLSVLPASNLAHIWKALIGEFNLWAAWLP
SDYEQRVFVLYRKGEQLHISYSSCDESSEHEWRPDISGSAAECSLCRIPLEDLDWLQKRM
VVQLCHQTKEHEVKVGVYLLESGLGKPEFLSGGNARLKKSSHLIQKLMEYFYDFIIPEVV
ENEEEECDTDLERQNVEELYDHVRLVHQNESQDVTYDIKHKALIPVLRLYQSQAVNWMLR
REKYRNTTPKEQSLHFLWRELVTLCGKKLFYNPYTGCLIREFPLAGVDWPGGILADEMGL
GKTVEVLALILFHTRQDLKQDTLTLPVGQSVNYFVPPRPLEGQKARCCKTEAQPKIKTSY
PTVRVMLLTAIKEMRSGKGASINAVFTYIRATYGYDLLKNRNHIKKTLAKLIDEGMVERV
KGRGLAGSFKLGKKYKETKKTLPGASKSSFKNMESTPRRMFQRRAKEKAEAALQNFVSED
QRDLSPTPGCPKAEEAETKEWGESLHERNDQPKDMLNTSTAPLQGSQDESESQTTDDSPE
ERGETSTIDSQDTQTPTRASLVPFNTPDYRFECICGELGIIDYKARVQCMNCQLWQHADC
VNYKVESLKTTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRHIRSSSLRVLVY
QGVKKHGFIQPRMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRNQKRYMAVPSPL
VAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGLEDLYGLVLFLGVD
PYWVKHWWDQLLYRPYRCGNTEPLYNVIAQILWRSAKKDVIDQIQIPPQTEEVHWLRFSP
VEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILYPLLRLRQACCHPQAVR
GEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRDEFVEAAEMYR
EVLRSSEEHKDRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRLSEEAEQLRQHYMT
KYDSEVSDAHQALQPVLQNIRELKRKVNLNSPWWLEVIQRAICCSTDDDLVSRVKNELTC
SYKQQANKLSMADKFLDAKGLQFLLTTQTQDLIQSQKTVRDAVKSLEGPASKKVIEEATN
CHLRPMRLPLNNCVFCKADEFFTDYESKLFAHTVKGQTAIFEEMIEDEEGLVDDRLPTTS
RGLWAASETERTLKAILSFAKVRRMDQELLEAGNIFMELFENWKKEYKVLHEYWMVLRNH
VSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVAKSQLQKKLGQF
LYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIIVEQYSMGARR
RAIKCAICRQTTTHTEISYVFTTQLSSQDQDIPVKGSHSTKVEAVVRTLKRIQVTDHGAK
CLVFSTWQSVLDIIAKALFDNNMEFSQINGIHKFQENLSSFKYDEKINILLLPLHTGSNG
LNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQAMLKTAE
KSQSSRTMKHSEAAVLTVADLADLFTDDTEPLE
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaacgaaaaagggtccctcctgtgagggtggatgaagaagccaagaggagg
ctggagtggaacatgatggagaatcgtaagaacgaggtgatccaagaagatgaactgact
ccagatgcccgttcagtacctccaactgataccacgccgagcagctctttcttctccatc
acagaagatgtgaatgaggccgcctgctcccgctctgtgcagttttcagacgaacttccc
agcacatcctcggcttgtgcctctgcctccctctcactctctgtgttaccggcttcgaac
ctggcccacatctggaaggctctcattggagagttcaacctttgggcagcttggcttcca
tcggactatgagcagagagtgtttgttctctacaggaagggtgagcagctccacatcagt
tacagcagctgtgatgagagctccgaacacgagtggaggcctgatatcagcggctctgca
gcagagtgcagtctctgcaggatcccactggaagacctggactggctgcagaagagaatg
gtagtgcagctttgccaccagacaaaagagcatgaagtcaaggtgggagtttatctgctt
gaatcaggactcggaaagccggagtttctcagtgggggaaacgctcgtctgaaaaaatca
agccacctgattcagaaattaatggaatatttttatgatttcatcattcctgaagtcgta
gagaacgaggaagaagagtgtgacactgacctggagaggcaaaatgtggaggaactttat
gatcacgtgaggctcgtgcaccaaaacgagagccaggatgtgacatatgatatcaagcac
aaggctctcatccccgtactcaggctgtatcagagccaggccgtcaactggatgctgaga
agagagaagtacaggaacaccacacctaaagaacaatccctgcactttctctggagggag
ttggttactttgtgtggcaagaaattgttttataatccttacaccggctgcttaattaga
gagtttcctctggctggtgtggactggcctggtgggatcctggctgacgagatgggactc
ggtaaaactgtggaggttttggccctcatcttgtttcacactcgacaggacctgaagcag
gacaccctcactctgcctgtgggacagtctgtgaactactttgttccacctcgtccgctg
gaagggcagaaagctagatgttgtaaaactgaagctcagccaaaaataaaaacatcatac
ccaactgtgcgtgtcatgctgctcactgcaataaaggagatgcgatctggaaaaggagcc
tcaatcaatgcagtgttcacctacattcgtgccacgtacggctatgacctcttgaagaac
cgcaatcacattaagaagactcttgctaagctcatagatgagggcatggtcgagagagtg
aagggccgcggcttggccgggtcgttcaagctgggcaagaagtacaaagaaacaaagaaa
acattaccaggagcatctaagtctagttttaaaaatatggagagcacacccaggagaatg
tttcagagacgagcgaaggagaaggcagaagcagctctgcaaaacttcgtctcagaggat
cagagagacctgagtcctacgcctggctgtcctaaagcagaggaagctgaaacaaaggaa
tggggtgaaagtctgcacgaaagaaacgatcagccgaaagacatgctgaatacctccaca
gcacctttacagggatctcaggatgaaagtgagtctcaaacaacagatgattcacctgaa
gaaagaggagaaacttcaacgattgattcacaggatacacagacaccaaccagagcctct
ttagtccctttcaacacccctgactaccgctttgagtgtatttgtggagaacttgggatc
attgactataaggctcgtgttcagtgtatgaactgtcagctgtggcagcatgcagactgt
gtaaactataaagtggaaagccttaaaaccacacctttctactgccctcactgcctggta
gctatgaaaccagtgtccactggtgccacactcatcatttccccaagttccatctgccac
cagtgggtagaggagatcaaccgtcacatcaggtcctcctccctacgagtgctggtttat
cagggtgtgaagaaacatggcttcatccagcctcggatgcttgctgagcaggatgtggtg
atcaccacctacgacgtgcttcgctcggagctcaactacgttgacattccccacagcaac
agcaaagatggcagacgctttcggaaccagaaacgctacatggctgtacccagcccttta
gtggctgtagagtggtggcgcatctgtctggatgaggcacagatggttgagtgccccact
gccaaggctgcagaaatggcactgcgtctggcatcagtcaaccgttggtgtgtcagtggt
acacctgttcaaagaggcttagaagatttatatggccttgtacttttccttggagtggat
ccatattgggtcaaacattggtgggaccagctgctttaccgcccttatcgctgtggtaac
acagaacctctctacaatgtgattgctcagatattatggaggtcagctaagaaggatgtc
attgaccagattcagattccccctcagacagaagaggtgcactggctgcgtttttctcct
gttgagggccacttctatcatcgccagcatgaggtctgctctcaggatgctttggtcaaa
cttaggaaaatctcagactggagcctgaaacttggcagcctggaccgccgcaccgtcaac
acaatcctctacccgctgctgaggctgcggcaggcctgctgccatccgcaggctgtgagg
ggggaattcctgcctctgcagaaaagcaccatgacaatggaggagcttctcaagtccctg
cagaagaaatgtcgagtggagtgtgaagaagctcacagacagctggtgtgtgctctcaat
ggcttggctggaattcacatcataagagatgagtttgtagaagctgcagagatgtacaga
gaagtgcttcgttcatcagaggaacacaaagacagactaaaaacagattcattacagcgg
cttcatgccacacacaacttaatggaactgctgagtgcaaagcatcctggaattcctcca
acactgagagatgatcgactcagtgaagaggctgagcagctgcgacagcactacatgacc
aaatacgactctgaggtcagtgatgcacatcaggccctgcagccagtcctgcagaacatc
agagagctgaagaggaaagtgaacttaaactctccatggtggctggaagtcatccaaagg
gcgatctgctgctccactgatgatgacctggtgtctcgcgtcaagaatgagctgacctgc
agctacaagcagcaggccaacaagctctccatggcagacaagttccttgatgccaaaggt
ctgcagtttttgctcaccacacaaacacaagatctgatacagtcacaaaagactgtgaga
gatgccgtgaagagtctggagggtccagcttcaaagaaggtcattgaagaagccaccaac
tgccacctcaggcccatgcgtctgccactcaacaattgtgtgttttgcaaagcagatgaa
tttttcactgattatgaatccaagctgtttgctcacactgtgaagggtcagacggccatc
tttgaagaaatgatagaagatgaggagggactagttgatgaccgtctccccaccaccagc
cgtggcctgtgggcagccagcgagactgagcgcaccttgaaagctatcctgtcttttgct
aaagtcagacgtatggaccaggagctgctggaggcgggaaacatttttatggagcttttt
gagaactggaagaaggagtacaaggtgctgcatgagtattggatggtgctgcgtaaccac
gtgtcagccatcgatgagctgggcatggccaccgagagactgcgagttcgtctgcccgat
gagccgaagcccaaactgctgcatatcatagagccacatgaagtggagcagaacagagta
aaactcctaaatgatcaggctgtggccaagtctcaactgcagaagaagctaggacagttt
ctgtatttaactaatctggagaagtcccaggacaagtccactggaggactgaacccagaa
ccttgtcccatctgtgcccgacccctgggtcaagagtgggcagtgctgacctgtggacac
tgcttctgtaacgagtgtattgctatcatcgtggagcagtacagcatgggcgcaaggcgg
cgagcaattaaatgtgccatttgtaggcagaccacgacccacacagaaatctcctacgtc
ttcaccactcagttgtccagccaggatcaggacattccagtcaagggcagccactcgacc
aaggtggaggcagtggtgagaactctaaagaggattcaggtgacagaccatggagccaag
tgtctcgtcttttctacgtggcagagtgttctggacatcatcgctaaggccttgtttgac
aataacatggagttttcacaaatcaatggaattcacaaatttcaggaaaatcttagttct
ttcaagtatgacgagaagatcaacatccttcttcttcctctccacactggctccaatggg
cttaatatcattgaagctacacacgtgttgttagttgaaccaatcctcaacccagctcat
gagcttcaggcgataggccgggtccatcggattggccaaaccaaaccaacatttgtgcac
agattcctcatcaaatccacaattgaagagagaatgcaggctatgctgaagacggcagag
aagagccagagcagcaggacaatgaagcactcggaggctgctgtcctgacagtggctgac
ctggctgatctgtttactgacgacacagaacctctggagtga
DBGET
integrated database retrieval system
