Austrofundulus limnaeus (annual killifish): 106527037
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Entry
106527037 CDS
T06063
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106527037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106527037
03036 Chromosome and associated proteins [BR:
alim03036
]
106527037
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106527037
Coactivators
SAGA/TFTC/STAGA complex
106527037
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106527037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
106527037
NCBI-ProteinID:
XP_013877250
UniProt:
A0A2I4CB82
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLTGQSSSAGKTDENGGAGSVAPANHHLGK
TLPPAPVSTTLEQQLQQGRRNKPEMRQEINSKDANLDKTVTSPTLGSASAFGEPPTTTAA
CVNATSGGPQSHGASITTLAASGGSTSASPQDSISTASRRSPKASPGAGEPSXEPSTPRK
RIATPRRRSASARIKSLNGAAVTTRRNSGSAAAENLSVSVGPTPPNSTRPPTSPINTSTF
TLSNANLPVGQSAIALDRGTPTIALRRLPSHIVASIAQNGNGTSVSALVVQQGDRLEPAT
SSASPEEQSKPATDTGASNVHDCQSTIVTSSQSSSVSSVINTVSSTSSAVTPAPTTTAPT
TTTTASPPLSSTTTTTTTAVCGTGMATPTTCVTVQTTSATTTTTAICMVRATAPSPSPAV
VAPAQSQPRPGLATPQRIVAPQLIVRPSQQQATYQLPPGFTIPQGMVLVRTELGQIVLVS
QQALAQVQAQAQAQAQNNISPRPATPTTATSFRVTTPQQCPVTSQTTRQCSLTPAKMAPS
PSPTPSSPALQTSSSSSSSSSSCPALRPKGPMAPTVAVTTPQQAPVVMAPQGPAQPTPQP
VQPAPTSVTAAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLL
DAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQGVKPAAI
GTPPAIVAGAAVRIRHPNSVSTTLSATALPAGTLGHTAAMGVKPGGVVSGQVRMPMVITQ
SIRPQGTMGKGAIIQTGKSPMCLPVQISGNQKNKLNDPGGGSFRDDDDINDVASMAGVNL
NEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVSMEAVTFISHA
TQSRLRTVVEKVSLIAQQRLDSFKDDEFYEQAGEVRSQLRFFEQLERIEKQRKDEQEREI
LLKAAKSRSRQEDPEQARLKQKAKEMQQQEEAQMRQRDANLTALAFIGPRKKRKLDSPGT
TPSGTEVCGSMAGSPAGSSAPSTSSRQYTRQRITRVNLRDLIFYMEQERETANSLLLYRA
LLK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggacgaaaaggct
gtcagcgacctcgtaggctcactggagtctcagcttactggacaaagcagctcggcaggt
aaaacggacgaaaacggaggcgctggctctgtggcccctgctaaccatcacttaggaaaa
acgctaccaccagctccagtgagcacaacactagaacaacaactacaacaaggacggcgt
aataaacccgaaatgcgccaagaaataaactctaaagacgctaacctggacaaaactgtc
acttcacccacgctgggctctgcctctgcttttggcgagcctcccaccactacggctgcc
tgcgtgaacgccactagcggcggtcctcaatcacatggagcatccatcacaacactggcc
gcatctggcgggtcaacttcggcatcaccgcaggacagcatcagcaccgcgtccagacgg
agtcccaaggctagcccgggcgccggggagccctcggyggaaccgagcacgccgaggaaa
cgcatagccacaccgaggaggaggagcgcgtcggcgcggatcaagagtttgaacggcgcc
gctgtgacgacgaggaggaacagcggctcagcggcggccgaaaacctcagcgtgtccgtg
ggtccaactccaccaaactccacccgaccgcccacatcccccatcaacacctcaactttc
accctttccaatgcaaacctgcctgtaggtcagtcagccattgctctagacaggggaact
cccaccattgctttgcgcagacttccgagtcatattgtagccagtatagcccagaacggc
aacgggaccagcgtctcggccctggtggtacagcagggcgaccggttagaacctgccacc
tcttcagcttccccggaggagcaaagcaaaccagccactgatactggggcttccaatgta
cacgactgtcagtccacaattgtaacatcaagccagtctagtagtgttagctcagtgata
aacactgtatcctcgacttcctctgctgtcacaccagctccaaccactacagcaccaaca
accaccacaacagcgagcccgcctctgagctctaccaccaccaccaccaccacagctgtg
tgtggaacagggatggcaacccctactacatgcgtgactgttcaaactacatctgccacc
actacaactactgccatctgcatggtcagggccacagccccstctccatcacccgccgtg
gttgcccctgcacagtctcaaccccgtcctggacttgcaactcctcaaaggatcgtagcc
ccccagctgattgtcagaccttcccagcagcaggctacctatcagctgccccccggcttt
accatcccacaggggatggtgttggtacgtaccgagctgggccagattgtcctggtttct
cagcaggctttggctcaagttcaagctcaggctcaagctcaggcccagaacaacatctct
ccgcgacctgcgaccccaaccacagcgacatcttttagagtaacaactccacagcagtgt
cctgtgacctctcagaccaccaggcagtgttctttgaccccggccaagatggcaccgtct
ccctctcccactccttccagccctgccctccagacctcttcctcctcttcttcttcctct
tcctcctgtcctgcactccgccctaagggccccatggcaccaaccgtggcagtgacgact
ccacagcaggccccagtggttatggccccccagggccccgcccagcctaccccccagcca
gtgcagccggcaccgacaagcgtcacagcggcccctggagctccagtcgtgtcccaggaa
atgcaagagaacgtgaagaagtgtaagaatttcctagccacacttatcaaactggcgtct
cacaactctccctctcctgagacttctaagaacgttaaggctctggttcaagacctgctg
gatgccaagattgaaccagaggagttcaccagccggctgcagactgaactcaaatcatct
ccgcagccttacctggtcccatttctcaagaaaagcctcccggccctcaggctgtctttg
ctgaacagtcagcagtccctgacccagcccctgcagcagggagtcaaaccagcagccatc
ggcactcctcctgccatcgtggccggggcagctgtccgcatacggcaccccaacagtgtc
agcaccactttgagtgccaccgcactgcctgctgggacgcttggacatacagctgctatg
ggtgtcaagcctggaggggttgtcagtggccaggttcgtatgcccatggtcatcacgcaa
tcaatcagaccgcaaggcacaatgggaaagggagccatcatacaaacaggcaaaagtccg
atgtgcctgcctgttcagatttctgggaatcagaaaaacaagctcaacgacccaggagga
ggctctttcagagatgatgacgacatcaacgatgtggcctccatggccggggtaaatctg
aacgaggagagcgcacgaatcctcgcgaccaactcagagctagtaggaacacaaatccgt
tcgtgtaaagacgaggcctttctccatccggggctgctgcaccgacggatcctggaaact
gccaagaagtttggagtgacagaggtttccatggaagctgtgacgttcatctcacacgca
acacagtcccggcttcggaccgtcgtagaaaaggtttctcttattgcacagcaacggctc
gactccttcaaggacgacgagttttacgagcaggctggagaggttcgctcgcagcttcgt
ttcttcgagcagctggagagaattgagaagcagaggaaagacgaacaggagagggagatt
cttctgaaagcagctaaaagtcgctcaaggcaagaggacccagagcaagctcgactgaaa
cagaaagctaaggagatgcaacaacaagaagaggcacagatgagacaacgggatgccaat
ctcacagcactagccttcattggacccagaaaaaaacgtaaattggactcaccagggact
acaccatcggggactgaggtttgcggcagcatggcaggctctccagccggctcgtcggcc
ccgtccacctcatctcgccagtacacacggcagcgcattactcgggtcaacctcagggac
ttaatattctacatggagcaggagagagagaccgccaactccctcctcctctaccgagcc
ctgctcaagtag
DBGET
integrated database retrieval system
