Austrofundulus limnaeus (annual killifish): 106527216
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Entry
106527216 CDS
T06063
Symbol
hhla1
Name
(RefSeq) HERV-H LTR-associating protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ubiq_DUF_assoc
Motif
Other DBs
NCBI-GeneID:
106527216
NCBI-ProteinID:
XP_013877484
UniProt:
A0A2I4CBX6
LinkDB
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Position
Unknown
AA seq
1140 aa
AA seq
DB search
MTGSHRFSRFCFFTFVSVLFLLLFSPALRLTELQERNSREFHKTTESPTEPVDPAALDLT
PLVNTLINSSQSGSRQLFSLLSVTSFSSLALHKLTLLVYNISSIKSLSSSALRRRFCYCV
TNDTNDLADFTAVLLDVMGNSTSSLQEIFKSSSILSVSQRNNSDCIYICVMAGKTGREVP
DLWDVGSIAPLFNQTIVEGPHSANISSIRLPADWHQPPTNLSHVSPSGISSMLTNRVLST
AHASLNQSRTATTTAKVTTHVLIETPEPTRTPELTRTPEPTRTRETTRTPQHSTTSXSPH
PSTVRIPETSNSWTNERLTEPETEPAIMLVPTGVPDRTIRTSPGLTTNPRKGTTSFSPLI
IQTEPTPGLNQTSRRMTSEPTTTPEPTITPEQTTTSESTTTTEPTTTSEPTTTPKLTTMP
EPTTITEPTTTSEPTTTTEPTTTSEPTTTTEPTTTSEPTTTPKLTTMPEPTTTTEPTMTS
EPTTTPEPTTTTEPTTTSEPKTTTEPTITSEPTTTPEPTTTTEPTTTSEPKTTTEPTITS
EPTTTPEPTTTTEPTTTSEPTTTTEPTTTSEPTTMPEPTTTTEPTTTSELTTTTEPTTTS
EPTTTPRPTTTPELTTTTEPTTTSEPTKTPKPTTTPKQTSMPEQTLMPEPITIPVPTTMP
ELITSPKLITTPRPTTTMNPEPTMTPESTTVPELITTSKPTKTPKATSTPEPIRTPELTT
MSEPTKTPKVTTTPEPTMNPVTTTMPQXSTTSTSSHLSTVQRPKTPSSWTTQGLTEPAVA
LALTIRTTMSEHTKEPRRDTAVFSTLINLTEPTPGLSKTSRHITPDPTTMPEPTTTPDPT
TMSEPTTTPDPTTIPEPSTTPDPTTMPEPATTPDPTTMPEPTTTPDPTTMPEPTTTPDPT
MIPEPTTTPDPTTMPEPTTTPDLTTIHEPSTTPDPTTMPQHSTGSMSPHLSTVRRPETLS
SWTTQGLMEPAVILALTGVTDRTIRTPLDPYKVTNFHLVSTLTNQTKLTSPPSKSTSVRV
STTRPTMGPTPGRTATTDHYEETEAAGCPWRRPDRSGGSVPGGPTTVGADELQPCVLQLC
SFFSQCLCRALRRRTARKSFCDDSHLWYETHTSEVCRRVKRIALSRSLKQRCLSKMCNKL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttcacacagattctccagattttgtttttttacttttgtttctgttttattt
ttgcttctcttcagtccagctttaaggctcacagagctgcaagagagaaactccagagaa
ttccacaaaactacagaaagtccaacagaaccggtggacccagcagccttagacctgacc
cccctggtcaacacgctgatcaactccagtcagtctggctctcggcagctcttctctctg
ctcagcgtcacctccttcagctctctggctcttcataaactcaccttgttggtttacaac
atttccagcattaaaagtctgtcgagcagcgcgctgaggagacggttctgttactgcgtc
acaaacgacaccaatgatttagcagattttacagccgtgctgctggacgtgatgggaaac
tcaacaagctctctgcaggaaatctttaaatcttcctccattttatcagtgtctcagagg
aataattctgactgtatttatatctgtgtgatggcaggaaagaccggcagagaggttcct
gacttgtgggatgtgggctccatcgctccgctcttcaaccagaccattgttgaaggtcca
cattcagcaaacatctcatccatcagacttcctgctgattggcaccaaccgcccacgaat
ctgagtcatgtctccccgtctgggatcagctccatgttgaccaacagagtcctttccacg
gcacatgcttctctgaatcagagcagaacagctacaacaacagcaaaggtcacgacccac
gtgctgattgaaacccctgagccaaccaggacccctgagctgaccaggacccctgagcca
accagaacccgtgagacgactagaacccctcaacattcaacaacctccatstctccacat
ccatctacggtccgaataccggagacatcaaactcatggacaaacgagagattaacggaa
ccagagactgaaccagctattatgttagttccgactggagtaccagacagaacaattaga
acatcacctggactcaccacaaacccccgcaaaggtactaccagtttttcacctttgatw
atccagactgaaccgaccccaggtctgaatcaaacttctcgacgcatgacctctgagccg
accactacgcctgaaccaaccattacgcctgagcagaccacaacctctgagtcgacaaca
accacagagcctaccacaacctctgagccgaccacaactcccaagctgaccactatgcct
gagccgaccacaatcacagagcctaccacaacctctgagccgaccacaaccacagagcct
accacaacctctgagccgacaacaactacagagcctaccacaacctctgagccgaccaca
actcccaagctgaccacaatgcctgagccgaccacaaccacagagcctaccatgacgtct
gagccgaccacaactcctgagccaaccacaaccacagagcctaccacgacctctgagccg
aaaacaaccacagagcctaccataacctctgagcctaccacaactcctgagccgaccaca
accacagagcctaccacgacctctgagccgaaaacaaccacagagcctaccataacctct
gagcctaccacaactcctgagccgaccacaaccacagagcctaccacaacctctgagccg
acaacaactacagagcctaccacaacctctgagccgaccactatgcctgagccgaccaca
accacagaacctaccacgacctctgagctgacaacaaccacagagcctaccacaacctct
gagccgaccacaactcccaggccaaccacaacccctgagctgactacaaccacagagcct
accacgacgtctgagcctaccaaaactcccaagccgactacgacccctaagcaaaccagt
atgcctgaacagacccttatgccagagccaatcacgatccctgtgccgaccacaatgcct
gagcttatcacatctcccaagctgatcacaactcccaggccaaccacgaccatgaaccct
gagccaaccatgactcctgagtcaaccactgtgccagagctgatcacaacttcaaagcca
accaagacccctaaggcgacctctacacctgagccgatcaggactcccgagctgaccaca
atgtctgagcctaccaagacccctaaggtgactacaacacctgagcctaccatgaaccct
gtgacraccacaatgcctcaackttcaacaacctccacttcttcacatctgtctacagtc
caaagacccaagacgccragttcatggacgacccagggattaacggaaccagctgtagca
ttagctctgacaatcagaactacaatgtctgaacacaccaaagaacctcgtagagataca
gctgtcttttcaactttgattaatctgacagaaccaaccccaggtctgagtaaaacttct
cgacatattacccctgacccaactacgatgcctgagccaaccactacccctgacccaact
acgatgtctgagccaaccactacccctgacccaactacgatacctgagccatccactacc
cctgacccaactacgatgcctgagccagccactacccctgacccaactacgatgcctgag
ccaaccactacccctgacccaactacgatgcctgagccaaccactacccctgacccaact
atgatacctgagccaaccactacccctgacccaactacgatgcctgagccaaccactacc
cctgacctaactacgatacatgagccatctactacccctgacccaactacgatgcctcaa
cattcaacaggctccatgtctccacatctttctacggtccgaaggcctgagactttgagt
tcatggacgacccagggattgatggaaccagctgtaatattagctctgactggagtcaca
gacagaacaatcagaaccccacttgatccttataaagtcacaaactttcatttagtttca
actttgactaaccagaccaaactgacttcacctccgagtaaatccacctccgtgagagtt
tcaaccacccgaccgacgatgggaccaacaccgggcagaacagcaaccaccgaccactac
gaggagacagaggcagcaggttgtccttggaggagaccggaccggagcggagggtctgtc
cccggcgggcccaccacggtcggtgccgacgagctgcagccgtgcgtcctgcagctctgc
agcttcttctctcagtgcctctgcagagcgctgcgccggaggacggcgaggaaaagtttt
tgtgacgacagccacctgtggtacgagacgcacacgtctgaagtttgtcgacgagtcaag
aggatcgctctgtccagaagtctgaaacaaagatgtttgtcaaagatgtgcaacaagctg
tga
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integrated database retrieval system
