Austrofundulus limnaeus (annual killifish): 106527402
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Entry
106527402 CDS
T06063
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106527402 (ap5b1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
106527402 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
106527402
NCBI-ProteinID:
XP_013877727
UniProt:
A0A2I4CCL0
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MASNWPERVGCFCSCPSDFLSGTNPEVFLTELLRELRDDRVSYNLKVVLLMPLCEYPTLL
CLSESAGEETALDLMSVFAQCPPTSTQFRCQLLVALTCVLICSSCARKRSRASLDFLDLI
FQVAQDVGDINNLQRSLRATACDCLRELEACSPGLLSQRLERLGELRQQETSGLHQVYAG
LQTVVLRNGVYQLSREPGAGAEHLKALLGGNTSAVWEAEQDSLQMTGEDSPGLASLILGS
MGSVLTLHTGADCKELKSVLSSLLEESYLLTPLCQAALLHRLTEVVAMVPGITPAILRAQ
LLRLLGTSEVCLFHVALLMKSAFTDSLFSAEDEAFLLKRLVVLSQHPVLSTPEKLFYIDC
ILHFPENRPIGCGDGDEALPVLLTPQLASALLPTVFNDGPTLLARLRLLSLVYLEEGELG
GLTYLYDQLMSLLRVVGSGGSREIVVTFFRAVFLFLLSFSHVERFCSGLSGQLCQLYLQH
PQLAPHLINMADQTQESLFESSWPLELLRGLQKVITEAPLTQLTLRSLSWHLKVLARVAE
EAEVCQHSSLGFLSSIITPSSPLCADGDWHLGNDMLRVCRCLLLHPSVDSLLVPLADILQ
HLTCCYGDTDIQDHARLYYTLLTTLSQEKLAAMLAQGSSEGGHQVKKRTLSCLMAESEGL
TSALTIHRTDRPVLCLTQAPEQPTETKTCVPDQNKVQEPLEXYRAQFTDPHFASEMTLKY
QLTHTEDSDPRFHQIFSIRLHFCLTHHHYEQLEDISVPCLFRERPPPVVQLRLKPQQPYP
NTLHVSAIFTTCDGFTWLTDLPDVHVAFQQLFMPLPAPPAWSPGSRLQLFQXLWDDICSE
SGGGSRSLFCCQLRGVALRMLLNKHLLPFLLSDPCGQEEFQVLLYLPPQNHLLLNIRAEE
DTVHFNVTTDNWQLLPHLNSYLLTITSSQRAVS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaactggccggagagggttggttgtttttgcagctgtccgtctgacttcctg
tcgggaacaaaccctgaggtgttcctgacggagctgctgagggagctccgagatgacaga
gtcagctacaacctgaaggtggtcctgttgatgcccctctgtgagtacccgaccctgctg
tgtctgtcagaatctgcaggggaagagacagcgttggacctgatgtcggtgttcgcccag
tgtccacccacgtccacccagttccgctgccagctcctggtggccctcacctgtgtcctc
atctgctcctcctgtgcacgcaagcgttcccgagcgtccctggacttcctggacytgatt
tttcaggtggctcaggatgtgggtgacatcaacaacctgcagcgctccctccgggccaca
gcttgtgactgccttcgagagctggaggcctgcagcccgggtctcctctcccagcgcctg
gagcgcctgggtgagctgcggcagcaggagacctcggggctgcaccaggtctacgcgggt
cttcaaactgtggtccttagaaacggagtgtatcagctgagtcgggaaccaggagcgggg
gccgagcatcttaaagctctcctaggaggaaacacttcggctgtgtgggaagcagagcag
gactcacttcagatgacaggcgaagactcccctggactggcctctctgatcctgggctca
atgggctcggtgctgacactgcacaccggagcggactgtaaggaactgaaatctgtcctg
tcctctctgttagaggagtcctaccttctcaccccgctgtgccaggctgcactcctacac
agactcacagaggtggttgccatggtacctgggatcactccggccatattacgagctcag
ctgctgcgactgctgggaaccagcgaggtgtgtctgttccatgtggccctgctgatgaag
agcgccttcacagacagcctgttcagcgctgaggacgaggccttccttctaaagcggttg
gtggtcctgtcccagcaccctgtcctcagcactcctgagaagctcttctacatcgactgc
atcctgcacttcccagagaaccggccaatcggctgcggcgatggcgacgaagcccttcct
gtgctgttaaccccccagctggcctcagccctgctgcccactgtgttcaacgacggcccc
accctgctggctcggctccgcctgctgtccctggtctacctggaggagggggagctcggg
gggctaacctacctgtacgatcagctgatgtcactgctgcgtgtcgtagggagcggaggc
agcagagagattgtggtgaccttcttcagagccgtcttcctcttcctcctttcctttagc
cacgtggagcggttctgttcgggtctgagcggacagctgtgtcagctgtacctgcagcac
ccccagctggctcctcacctcatcaacatggccgatcagactcaggagagcctgttcgag
tccagctggcctttagagctactgaggggcctccagaaggtgatcacagaggccccgctg
acccagctcaccctgcggtccctcagctggcacctgaaggttctggctcgggtggcagag
gaagcagaagtctgccagcacagctccctgggcttcctgtccagcatcatcaccccctcc
tctcctttgtgtgcagatggcgactggcatctgggaaacgacatgctgagagtctgccgc
tgcttgctcctccacccctctgtggactcgctgctcgtccctctggcggacatccttcag
cacctcacgtgttgttatggagacacagacattcaagaccacgcccgcctgtactacacc
ctcctcaccacgttgtcccaggagaagctggcagcaatgctggcacagggctcgagtgaa
ggtggacatcaggtcaaaaagagaaccctctcatgcctcatggctgagagcgaggggctg
acgagcgcactgaccattcaccggacagacaggcctgtactctgtttgactcaggctcct
gaacagccaacagaaactaaaacttgtgtcccagatcagaacaaggtacaggaacctctg
gaawcctacagagctcagttcactgaccctcattttgcctcagaaatgaccctgaaatac
cagctgacccacacggaggactctgacccccgattccaccagatcttcagcattcgcctc
cacttctgcctcacccaccatcactatgagcagctggaggacatcagcgtcccgtgtctc
ttcagggagcgaccaccgcctgtggtccagctgagactgaaaccccagcagccttaccca
aacacccttcatgtcagcgccatcttcaccacctgcgacgggttcacctggctcaccgac
ctgcctgatgttcacgtggccttccagcagctcttcatgcccctgcctgcacctccagcc
tggagtccagggagcagactgcagctgttccaaraactctgggacgacatctgctctgaa
agcggaggtggaagccgcagcctgttctgctgccaactgaggggcgtggctctgaggatg
ctgctgaacaagcacctgctccccttccttttgtcagacccatgtggtcaagaagagttc
caggttctgttgtacctccctccacagaaccacttgctgctgaacatcagagccgaggag
gacaccgtgcacttcaacgtcaccactgataactggcagctgctgccgcacctgaactct
tacctgttgaccatcacatcttcacagcgtgctgtcagctga
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