Austrofundulus limnaeus (annual killifish): 106527424
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Entry
106527424 CDS
T06063
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106527424
Membrane trafficking [BR:
alim04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106527424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
106527424
NCBI-ProteinID:
XP_013877760
UniProt:
A0A2I4CCP1
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSVGEEVP
PGFTCIETTPSGQSADLNNGGLMAPQIYLCYRRGHDKPPLTDLGVLYEWKERLKQGCHLI
QTTPSGRPANISGNSSQRIYITYRRAPESQPHASLAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNIIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDQQFSQLGLLSSQQHE
PSNITASTIDNSNCCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKHIS
HFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPENAVTLLV
FAVTEHKILIHSLRPAVLTSVSEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGV
DSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLRNLHQQLVDG
QSRPDGLLELSMSNSQELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQAPSEK
ATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDTSLAFFDDCVDK
LYNSERSAEKGGKVDGDRTEEARLIETDESQRSEHTVFITPPELPPLADGEEHPLCYRYD
GFPVLSLDLFDPVEGLWTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKKYSSIPQL
WSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQSKKLQPPDEVCYRVLMQL
CGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVIL
GVAQFKRALRRHGPLTQSPLSDGSDLDAVSHSSMDSSADANPAERGPYASDPVKVDPTDD
RSSTGDQSDLGYNSLSKEEVRRGEPTPQDPAPDKDKKESDCSSLSETESVKGSKDCLPQL
DLEMKSSFKPRGIVRSSYPYEDSSCKPKSSASTGHVAGLLFTSSLDEIGEVHSSSLIRRH
KSVLEEVVGSTSGSSALDWQVVRGRRLSGDTAGGGGTTVLGLGMNQAETDPDKIAGHLGA
DAKILSSASFNRRSRSQGQXGCEGLTAKAGGSFRCCEEEEEGQVSSDEXRSQTEAIFDFE
DLEIDKPATEVSPHSRVHRKPFERSASYGGVSAATPKGTIRRTGIETGYDPLSLLAAELQ
PGRPDTTQLVEEDEAGTPKAGRNLAREIEVYMNHLDTPLSSRTSSSDLQDLASPLLLHPS
TASAPRRSSLPHGSPFRTAGVPRSFTFHQTSPSQPVSXQRMVSSPSCPSSSTSPSLSPFR
EQADGVMMSPSSSSSSFALDTLLTPTLDVFKTSVVSAGKGVAEKASRWYSRLATYTTPTK
DAHSDRLSVSSLVVGDPECSSLLDEAECAESECSVVFPQRNGPPGPRRSPRRSSVHSRVS
SPPVSCSLRKPSSLLPGSALSPPEFPLPDKSDLGSSRYTSNTSIFNNYAMELLISSCSRC
KTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGTGRLFLKGSPSLD
EAMTSSYSTSTGMDTGTSTLSTPCPTTAVCPPSPSTAMQDSSGRVWPIRAQGINIPLERQ
QGALSSGGAMTRSVSAFSPLEESSGFGRCLPTSGSLPTHLNEATDPMSMDWRLHNPEPVT
VPYLSPLVLWKELESLLENEGDMVISEADMVDHHPIIYWNLVWYFRRLDLPSNLPGLILT
SEHCNKDTQIPRHWMSEDSKHVLIQILWDNLKLHQDPVQPLYILWNAYNVGYPLARPVPE
EEKPFSEELLQSVVKSIQRNDVSRPMAQLLQLLDKTLGVKRQRSLYRDILFLSLVALGKD
NIDIDAFDREYKLAYDRLMPHLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggcccacgtgtagccgactactttgtggtggctggtctgacggat
ccatccaaaccattggaccaggagatccactttgatgacgtgtgccacaagacggccaaa
ccgaaagcccccattactgatgtggcggtggtgatccgatcagtgggcgaggaggtgcct
ccggggtttacatgcatagagaccacaccaagtggccagtcagctgatcttaacaacggt
ggcctcatggcaccacagatctacttgtgctacagacgaggccatgacaagccgccgctc
accgaccttggtgtgctgtacgaatggaaggagcgactgaagcagggctgtcacctcatt
cagaccactccgtctggacgtccagccaacatcagtgggaattcctctcagcgcatttac
atcacgtaccggcgagcgcctgagagccagcctcacgcctcgctggccgtcaccgacatc
tgcatcatcatcccaagcaaaggggagacgcccccgcacaccttctgtaaggtggagaag
aacctcaacagcagcatgtggggctcctctgtttatctgtgttacaagaagtctgtggcc
aaaaccaacataatagcctataaagcaggtttattcagcagataccctgaggaggactat
gagtcgtttcctctgccagagtctgtccctctcttctgccttcctatgggggccaccatc
gagtgctggccagcaaacaccaaatactctcttcccgttttttccacgtttgtcctcact
ggagcttcaggagagaaggtttatggtgctgccatccagttttatgagccatacccacag
gagtgtctgacagatcagcagttctcccagctgggcctccttagctcacagcagcatgaa
ccatccaacatcacagccagtaccatagacaactcaaactgctgctccgtctacaccaac
aagtgtatctgcctgctctctcactggcccttctttgacgctttccgcaagttcctcaca
ttcctctatcgctactccatctcaggccctcatgctctgcccattgagaagcacatctct
cactttatgcacaaagttccctttccttcttcccagaggcctcgcatcttagtgcagctt
tcccctcatgacagcctgatgttgagtcaaccagtgagttctcctttaccactcagtggt
gggagattttccactctgcttcagaacctgggaccagaaaacgctgtgaccttacttgtg
tttgctgtcactgaacacaagattctgattcactcgttacgtccagcagtgctgaccagc
gtatctgaggctttagtgtctatgatttttccttttcactggccatgtccatacatcccc
ttgtgccccctggctttggctgatgttttgagtgccccctgtccattcattgtaggggtg
gactctcgatactttgatctttacgacccgccgccagatgtgagctgtgtggacctggac
acaaacaccatcttccacaatgaagataaacgagctctcacgtggaagatcctgccaaag
aaagcctgtaaaaacctaatgaatgtgctgagaaatctccaccagcagctggttgatggt
caaagccggcctgatggcttgctggagctgagcatgagtaattcacaagaactaagctgt
ggaaagagtctccacaccctggagctggagatccaggaagcctttctgcgctttatggca
gctattttaaaaggttaccgctccttcctgcggcccatcactcaagccccttcagagaaa
gccacagacgcgagctcactcttcgacttgcaaggcttcttgaagagccgggaccgctca
caccagaagttttactctttaatgacaaagacccagatgtttatccgcttcattgaggag
tgctcatttgtcagcgacaaagacaccagcttggccttcttcgatgactgcgtagacaaa
ctgtataattcagaacggagtgcagaaaaaggaggcaaggtggatggtgacaggacagag
gaggccaggctgatagagacagatgagtcccagcgcagtgagcacacggtcttcatcacg
cctccagaacttcctccattagctgatggagaggagcatccattatgctacaggtatgac
ggctttccagtgttgagtctcgacttgtttgaccccgtggagggcctgtggacaccctcc
tctcgcctcgctgcccggcacagctgtcccaccagccccgcccccatgtttagacgcacc
aaacaggaaatcaaatcagcccagaagatagctaagaagtactcgtccatccctcagctg
tggtccaagtgtctgctccgtcactgctatggtctgtggttcatctgcctgcctgcgtac
gtgaaggtgtgtcactcgaaggtacgggcacttcgcacygcctacgacgtgctcaggaag
atgcagtcaaagaagttgcagccccctgatgaggtctgttaccgggtcctgatgcagctc
tgtggacagtacggccaacctgtcctggctgtcagggtcctctttgagatgaagaaggct
ggagttcatccaaatgcaatcacctacggctactacaataaggcggtgttggagagcacg
tggccttccagcaccagaggaggatactttctgtggatgaagctgagaaacgtcattctg
ggcgtggcgcagttcaagcgggctctacgacgacatggacccctcacgcaaagtcccctt
tcagatggcagcgacctggacgctgtgagccacagcagcatggatagttctgccgacgct
aacccggccgagcggggcccctacgcctcagaccccgtcaaagtagaccccactgacgat
agatctagcacaggagatcagtcagatttgggatataactccctgtctaaagaggaagtt
cggagaggagaacccaccccacaggatccggcccccgacaaagataagaaggagagcgac
tgcagctccctatcagagacagaaagtgtaaagggaagtaaagactgcctccctcagctg
gatttggagatgaagtcctccttcaaacctcgaggaattgttcgcagcagttatccttac
gaggactcatcctgcaaacccaagagttctgccagcacaggccatgtggcaggtctcctc
ttcacctcctcgctggatgagatcggtgaagttcacagcagcagtttgatcaggagacat
aagagtgttctggaggaggtggtgggcagcaccagcggcagctctgctctggactggcag
gttgtgaggggtcgccggttgagtggggacacggcgggcggcggcggcaccaccgtgctc
ggcctcgggatgaaccaggctgaaacggatccggataagatcgcagggcacttgggcgca
gatgccaaaattctgtccagcgctagtttcaataggaggtctcgttctcaaggacagagm
ggctgtgaaggactaactgctaaagctggggggtctttcaggtgttgtgaggaggaagag
gaaggtcaggtgtctagtgatgaagasaggagtcaaacagaggccatttttgattttgaa
gacctggaaatagacaagcctgccacagaggttagcccacacagcagagttcacaggaag
ccctttgaacgcagcgccagctatggaggcgtgagcgctgccacacccaaaggaactatc
aggaggactggaattgaaacaggctatgacccactttcccttctagcagcagaactgcag
cctggacggccggacaccactcagctcgtggaagaagacgaggccggcacgccgaaagct
ggcaggaacctggcccgagagatcgaggtctacatgaaccacctggacaccccgctgagc
agtcgcacgtccagctccgacctgcaggacctggccagcccgctcctcctccacccctcc
acggcctccgccccccgcaggtccagcctgccccacggctcccccttcaggacggccggg
gtgccgcgctctttcaccttccaccaaacctcaccctcccagcccgtctctcrccagcgt
atggtctcatccccatcctgtcccagctccagcaccagccccagcctcagccccttcaga
gagcaggctgacggagtgatgatgtcaccttcgtcctcctcctcctccttcgccctggac
actttgcttacacccactctagacgtctttaagaccagcgtggtctctgctgggaagggc
gtggctgagaaggcgagccgctggtattcacgtttggccacctacaccacacctaccaag
gatgcccatagtgaccgtctgagtgtgtcgtccctcgttgttggagatccagaatgctcc
tccctgctggatgaagctgagtgtgcagagtctgagtgctcagtggtgtttcctcagaga
aatggccccccggggcctcgcaggagccccaggcgcagctctgtccacagcagagtgagc
agcccccctgtgagctgcagcctcaggaaaccctcatctctccttcctggaagtgctctg
tctccgcctgaattccctctacctgacaagtcagacctcggctcgtctcgctacaccagc
aacaccagcatcttcaacaactacgccatggagctgctgatctccagctgctctcggtgt
aaaacatgtgactgtttggtttacgacgaggagatcatggccggctggacggccgacgac
tccaacctgaacaccacctgtcccttctgtgggaaccccttcctgcctttcctcaacgtg
gagatccgggacatgcgagggactgggaggcttttcctgaagggcagcccgtccctggat
gaagcaatgacatcatcgtactccacctccacaggtatggacacggggacgtccactttg
tccacaccgtgtcccaccacagctgtgtgccccccctccccatcgacagccatgcaggac
agctctggaagggtgtggccaatcagagcacaaggaatcaacatccccttagagcgacag
cagggggcgctgtcctctggaggagcaatgacccgcagcgtcagcgccttcagtcctctg
gaggagtcgtctggattcggccgctgcctgccgacatcaggcagcctgcccactcatctg
aatgaagccacggaccccatgagcatggactggaggctccacaaccccgagcctgtgaca
gttccttatttgagcccgctggtgctgtggaaggaactggagagcctgctggagaacgag
ggcgacatggtgatcagtgaagccgacatggtggaccatcatcccatcatctactggaac
ctggtctggtacttcagacggctggatctgcccagcaacctgccgggtctcatcctcacg
tctgagcactgcaacaaagacactcagatccctcgtcactggatgtcagaggacagtaaa
cacgtgttgatccagatcctgtgggacaacctgaagctgcaccaggacccagtccagcct
ctctacatcctctggaacgcatacaacgtggggtaccctctggctcggcccgtccccgag
gaggagaagccgttcagcgaggagctgctgcagagcgtggtgaagagcatccagaggaac
gacgtgagccggcccatggctcagctgctgcagctgctggacaaaacccttggagtcaaa
agacaaaggagtttgtaccgagacatcctctttctctcactggtggctttaggaaaagat
aacatcgacattgacgccttcgatcgggagtacaagttggcgtacgaccgcctcatgccg
cacctggtgaagctgacccacaactgtgaccgtcctccgagcacgggtgtcatggagtgc
cgccggacgtttggagagccttacctgtaa
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