Austrofundulus limnaeus (annual killifish): 106527650
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Entry
106527650 CDS
T06063
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106527650
04020 Calcium signaling pathway
106527650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106527650
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106527650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
106527650
NCBI-ProteinID:
XP_013878045
UniProt:
A0A2I4CDH5
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MKRMVPHCSRWAERRSTVVYAVRAATFGSWRMLTQGAEYEDAWAPSPDRKRGLSKPLDEE
NPDPAEGGPDEPHEPCWRADHGVPEQKYDTVLQLDGVSRAAARDGVRRVVWKHDTLNGSP
LVRMARFADDLPTRYGGSAGGGGRGGGPGAPGRGPARGAQRMYKQSMAQRARTMAIYNPN
PVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASD
KTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATV
GSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGV
EFYMGKFHHTCFKPTGEIAVYRPCGGPPARECPNGTTCKEYWKGPNFGITNFDNILFAVL
TVFQCITMEGWVDVLYSTNDAIGNSWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERER
VEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAVEKSPLDGAWYKRNQNLS
VLKRGKIKKGKNDLIGAEEGEDPFADMSSVVPPGSPFGRASVKSSGKMDSSSYFHRKEKR
FRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTRALYTAEFVFLGLFLTEMT
LKMYGLGGRNYFHSSFNCFDFGVIVGSICEVIWDMIKPGASFGISVLRALRLLRIFKVTK
YWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFP
AAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNRDALSHRSS
IISIQSPKEQQRSAKAMSVWEQRTNQLRKHNMKTSTEALFNELDSEERLRMSTSLHLHPD
MTTHTDRPLVVETSDGDKTSSGGPEEPAGPRYDGLGDGFHVHSRRHHRHRDKSGEGGDGR
GGKHHAHHRREHNPDGENRRHHQAGSPERDDSDVRGGAEERGHRHHRSHRTPRDGNGRLV
NGAQEEGRGRGENNAERQIRYSRLAKAQSTLTGDDCRRNNGSRSCRERQAETEEDSLAGS
PLQLKRSSLTPSEKQEDADNQKNSTRASQAGLNSNTIHIPVTITGPPGDTTFIPMNNIDC
DNFQLSEEKKDLEEEEEEATNGPRQILPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILL
VITMSSITLAAEDPVQTNAPRNNVLKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDL
WNILDFIVVSGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPK
LKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLQKDCRGQFL
DYDRDDVTAQLREWKKYEFHYDNILWAFLTLFTVSTGEGWPLVLKHSVDATYEDQGPSPG
FRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAR
PLTRYMPENKESFQYKMWKFVVSSPFEYAIMTLIALNTVVLMMKFYDAPLAYELMLKYLN
IIFTGLFTLECILKIIAFNPLNYLKEPWNVFDFVTVIGSITDILFTEINNKMINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDE
SHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSGQGCEPDPSIAPLTMSPDHEGGC
GTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRL
ACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPVDEDMTVHFTSTLMSLIR
TALDIKIARGGEDRIALDSELQKEISIIWPYLPQKTLDLLVPINKDTDMTVGKIYASMMI
MDYFKQNKAKKLRQQLEAQKSKLMFKRLDASTLPEDILSNTQPLPMMAHSAGSALTRGGF
VALSPISPQELFLQPISSDVDASQQQNLQTEVRSGSMKRSVSTVADQRVNGLWQEEKSPE
RVYRPRHKSYKAAVSRSEHRERGRSKELCHLLSPDTSRCNSEERSLQPSRSSSAEREHLQ
DKQGNSSDSPVPSTSESSTPSGRRPLSQTPTRSHPHISYSPLVCRTQTSAVEDEDGEQGS
PETVRQGKPDWDTQEGAAGERRSKAGGYSSPPRRYPSEPFLASQEDDHSPDPTGPMETLT
FEAAVACSLGRANTIGSAHPRWRTGWQVPNGHFRKRLVQTTSTSGCDPLSDTEEDDRC
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatggtccctcactgctccaggtgggccgagagacgatccaccgtggtttat
gcggtccgcgcagccactttcggctcctggaggatgctgacccagggggcggagtacgag
gacgcctgggccccgtcacctgacagaaagcgcggcctttcaaaaccgctggatgaagag
aacccggacccagcggaaggtggccccgatgagccgcatgagccatgttggagagctgac
cacggagtcccggagcagaaatacgacaccgttttacagctggatggagttagcagagcg
gctgcgagggacggtgtccgccgggtggtctggaagcacgacacactgaacggatccccg
ctggtcagaatggcccgcttcgctgacgatctccccacccgctatggaggaagcgcaggc
ggcggagggcgaggaggaggaccgggcgctccggggagggggcccgcccggggcgcgcag
aggatgtacaaacagtcgatggcccagagagcccgaaccatggccatatacaacccgaac
cccgtcaagcagaactgcttcacggtcaaccgctccctcttcatcttccgagaggacaac
ctgatcaggaagtacgccaagcggatcacagagtggcctccctttgagtacatgatcctg
gcaaccattatcgccaactgcatcgtcctggccctggagcagcatctaccagcgagtgac
aagacacccatgtctgaacgcctggacgacacagagccctactttattggaatattctgt
ttcgaggcggccattaagatcatcgccctgggctttgcatttcacaaaggctcctacctc
cgcaacggctggaatgtaatggacttcgtggtcgtcctcacagggatcctggccaccgtg
ggttcggacttcgacctgagaacgctgcgagccgtccgagttctgagacccctcaaactg
gtgtcgggaatccccagcctccaggtggtgttgaagtccataatgaaagccatggttcct
ctgcttcagatcggcctgctgctcttcttcgccatcgtcatgtttgccatcatcggggtg
gagttttacatgggcaagttccaccacacctgcttcaagcccacaggggagatcgcagtc
tacaggccttgtggcggaccaccagccagagaatgtcccaatgggaccacctgtaaagag
tactggaaaggaccaaattttggcatcaccaacttcgacaacatcctgtttgcggtgctc
accgtgttccagtgcatcactatggagggctgggtggacgtgctctacagcacgaacgac
gccatagggaactcgtggaactggctgtacttcatcccgctcatcatcatcggctccttc
ttcatgctcaacytggtgctcggtgttctgtcaggagaatttgccaaagagmgagagcgy
gtggagaagaggcaggagttcctgaagcttcggcggcagcagcagatcgagcgagaactc
accggctacctggagtggatctgcaaagcagaggaggtgctgctggaggaggaggacgag
atcgcggtggagaagtccccgctggacggagcgtggtacaagaggaaccagaacctgtca
gttctgaaaagaggcaaaatcaagaaaggtaaaaacgacttgatcggtgcagaagagggc
gaggatcccttcgctgacatgtcgtctgttgttcctcctggctctccgttcggccgggct
agcgtgaaaagcagcgggaagatggacagctcctcttatttccaccgtaaagagaagagg
ttccgcttcttcatccgcagaatggtgaaagctcagagtttctactggatcgttctgtgc
ctggtgggcctcaacacgctgtgtgtggccatcgtgcactacgaccagcccgactggctg
accagagctctctacacggcggagtttgtgttcctgggtttgtttctgacggagatgact
ctgaagatgtacggcctcggaggaagaaattacttccactcctccttcaactgctttgac
tttggggtgattgtgggaagtatctgtgaggtcatctgggacatgatcaaaccaggagca
tcgtttggcatcagtgtgctgcgggccttaagacttctgaggattttcaaagtcaccaag
tactggaactcgttgaggaatctcgtggtttccctcctgaactccatgaagtccatcatc
agtttgctcttcctcctcttcctcttcatcgtggtgtttgccttgttggggatgcagctc
ttcggaggacagtttaactttgaggatgagacaccgacaacaaactttgatacgtttcca
gcagcaattctcaccgtgtttcagattctgaccggtgaggactggaacgctgtgatgtac
cacggcatcgagtctcagggaggcgttcgacgcggcatgttctcctccatctacttcatc
gtcctcacrctctttggaaactacactctcctgaatgtcttcttggctatcgctgttgat
aacctcgccaacgcccaggagctcactaaggacgaagaggagcaggaagaggcagccaat
aagaagctggccttgcagaaagctctggaggtgaaggaagtcagccccatgtcagccgcc
aacatttccatcgccgcttttgtaaagcaaaatcgagatgcactgtctcacaggtcgtcc
atcatcagcattcagtcacccaaggagcagcagcggtctgcaaaggccatgtccgtgtgg
gagcagaggaccaaccagctgaggaaacacaacatgaagaccagcaccgaggccctgttt
aacgagctggactccgaggagcgcctccggatgtccacctccctccacctacaccccgac
atgacaacccacacggaccggccgcttgtggtggaaaccagcgacggcgacaaaaccagc
tcaggaggtccggaggagccggcggggccccgatacgacgggctgggtgacggcttccat
gtccactccaggaggcatcatcgccaccgtgacaagagcggcgagggaggcgacggtcga
ggagggaagcaccacgctcatcaccggagagagcacaacccagacggtgagaaccgccgg
caccaccaagccggatcccccgagagggacgacagtgatgtacgaggaggagcagaggaa
agagggcaccgccaccatcgctctcatcgaactccaagagayggaaatggacgtttggtc
aacggagctcaagaggagggcagagggagaggagagaacaacgcagagaggcagatcaga
tactctcgcttggccaaagctcagtcaactttgacgggagacgactgtaggaggaacaat
ggatcgaggagctgccgggagaggcaggcagaaaccgaggaggacagcctcgccggcagt
ccgttacagctgaagaggagcagtttgacccccagcgaaaaacaggaagacgccgacaac
cagaagaactccaccagagccagccaggccggactcaacagcaacactatccacatcccc
gttaccatcaccggcccacctggagacaccaccttcatacccatgaacaacattgattgt
gacaacttccagctcagtgaggagaagaaagatctggaagaggaggaggaggaggcgact
aacgggcctcggcagatactcccctacagctccatgttcatctttggacagacgaacccc
gtgcgacgcctgtgccactacgtggtcaacctgcgctactttgagatgtgcatcctgttg
gtcatcaccatgagcagcatcacgctggcagccgaggaccccgtgcagaccaacgcgcca
cgcaacaatgtgttgaaatatctggattacatttttacaggagtcttcacttttgagatg
gtgattaagatgattgacctggggctgctcctccaccccggctcttatttccgtgacctg
tggaacattctggacttcatcgtggtcagcggggctctggtggcgttcgcctgctcgagc
cttatgggatcgcaacaaagcgtggccagagggaccaaagggaaggacatcaacaccatc
aagtcccttcgagtcctccgagtcctgcggccactcaagaccatcaagaggctgccgaag
ctcaaggccgtgttcgactgtgtggtgaactctctgaagaacgtgctcaacatcctcatc
gtctacatcctcttcatgttcatctttgccgtcatcgccgtgcagctcttcaagggcaag
tttttctactgcaccgacgagtccaagggcctgcagaaagactgcagaggtcagttcctg
gattatgacagagacgatgtgacggctcagctcagagagtggaagaagtatgagtttcac
tacgacaacatcctctgggctttcctgacgctcttcaccgtctccactggggaaggctgg
ccgctggtcctgaagcactcggtggacgccacctacgaggaccagggccccagcccgggc
ttccgcatggagacgtccatcttctacgtggtctacttcgtggtgttccccttcttcttc
gtcaacattttcgtggctttgatcatcatcaccttccaggagcaaggagacaaggccatg
tccgagtgcagcttggagaagaacgagagagcytgtattgactttgccatcaacgccagg
cctctgacgaggtacatgccagagaacaaggagtccttccagtacaagatgtggaagttt
gtcgtctcgtcgcctttcgagtacgccatcatgactctgatcgctctcaacacggtcgtg
ttgatgatgaagttctacgacgccccactcgcgtacgagttgatgctgaaatacctgaac
atcatcttcaccggcctcttcacgctggagtgcatcctgaagattattgcttttaatcct
ctgaactacctgaaagaaccctggaacgtctttgactttgtgactgttatcggatccatc
acagacattctgttcacagaaataaataacaagatgataaatttgagtttcttaaggctg
ttcagagcagctcgtctcatcaagctgctgcgacaaggctacaccatccgcatcctgctg
tggaccttcgtacagtcgttcaaggctctaccttatgtctgcctgcttatcgccatgctt
ttcttcatctacgccattattggaatgcaggtgtttggaaacatcaagctgaacgatgag
agtcacatcaaccagcacaacaactttaagacctttttcagcgcattgatgcttttgttc
aggagtgctacaggcgagtcctggcaggagataatgctctcctgtctgtcgggacagggg
tgtgaaccagacccctccatcgcccccctcaccatgtctccagaccacgagggtggctgt
ggcaccgactttgcttactgctacttcgtctcctttatcttcttcagctcatttttgatg
ctgaatctgtttgtggctgtgattatggataatttcgagtacctgactcgagactcctcc
atcctgggccctcaccacctggacgagtttgtccgaatatggggggagtacgatcgactc
gcgtgtgggcgtattcactacacagccatgtatgagatgttgacacacatgtcaccgccg
ctgggcttggggaagaaatgtcctgctaagatcgcctacaagaggttggtattgatgaac
atgcccgtggatgaagacatgaccgtccacttcacttccaccctgatgtcactcattcgc
acagctttggacatcaaaatagctcgaggtggggaggatcgcatcgctctggactctgag
ctgcagaaggagatcagtatcatttggccttatctgccccagaagaccttggacctactg
gtacctatcaacaaagataccgacatgacggtggggaagatctacgcttcgatgatgata
atggactacttcaaacagaacaaagccaagaaactccggcagcagctggaggctcagaag
agtaagttgatgttcaaacgtctggacgcctccaccctccctgaggacattctgtccaac
acccagccgctgccgatgatggcccacagtgctggttcagctctgaccagaggaggcttc
gtggctctgagccccatctcgccgcaggaattatttttgcagcccataagctcagatgtg
gacgcaagtcagcaacagaatctgcagacagaggttagaagtggatccatgaagcgttca
gtctccacagtcgcggatcagcgtgtaaacggactctggcaggaggaaaaaagtccagag
cgagtgtatcgacctcgtcacaaaagctacaaggctgctgtttctcggtccgagcaccgg
gagcgtggccgctccaaagagctttgccacctcctgtctcccgacacgtctcgatgcaac
tcagaggaacgcagcctgcagccctcgcggtcctccagcgctgagagagaacacctgcag
gacaaacagggcaacagttcagacagcccagtaccctccacctcagagtccagcacaccc
agcggccggcgacctctgtcccagaccccgacccgatctcaccctcacatctcctactcc
ccacttgtgtgtcgcacccagacctcggctgtggaagacgaggacggggagcagggcagc
ccagaaaccgtgaggcagggtaagcccgactgggacacccaggaaggggctgcaggagag
cggaggagcaaggccggcgggtactcgtccccaccccgacgctacccatccgagcctttc
ctggcctcgcaggaggacgaccacagcccggacccaaccggtccaatggagacgctgacc
tttgaggcggccgtggcctgcagtttagggcgcgcaaacaccattggctcggcccacccg
cgctggcggaccgggtggcaggtccccaacggacacttccggaagcgtctcgtgcagacg
acctcaacgtcaggctgcgacccactcagcgacacagaggaggacgaccggtgctag
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integrated database retrieval system
