Austrofundulus limnaeus (annual killifish): 106527895
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Entry
106527895 CDS
T06063
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alim00535
]
106527895
Proteoglycans [BR:
alim00535
]
Extracellular matrix (ECM) proteoglycans
Others
106527895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_ROS1
NDNF
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
106527895
NCBI-ProteinID:
XP_013878357
UniProt:
A0A2I4CEE1
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MLPTGEVRWRLWAPLVVLALVSWHPSRAQGQVSAPRRLRFKVQSPSKLLVSWREPKGDVD
SYLFFYNSIPGGQQKEVIVSKSDTNVLITDYKPSREYVFSVIAVRGRKQSSPLHGRFKAH
KVERGDGRDQTEPHRQTDPAGPPDDANEISGADQFVCRTEAIADIVILVDGSWSIGRINF
RLVRTFLEILVNAFDVGIDKTRIGLAQYSGDPRIEWHLNTYSTKDAVXEAVRNLPYKGGN
TLTGLALNFISEHCFKSDFGSRVGVPKIGILITDGKSQDDVIPPAESLREAGVELFAIGV
KNADENELRSIASEPEDTHVYNVADFNVMSSIVEGLTKTVCEQVEQQDKEIKQKEKTGMP
FKLETSEVTAQSFRVSWSPAPGNVRKYRVVYYPVQEDEPQEAVVVGSETSVVLQHLSSLT
EYQLAVYAVYANEASEALRGSETTLALPSVTSLQLFDVTQSTMKARWNRVDGVSGYMLLY
APLTEDGDLDRMEMNVPDTVTDVELDGLMPETEYSVTVFAMYGEEAGDPVTQRETTLPLN
PPKNLQFSDVTHNSAHISWDQASGGVKGYRIKWVMADGQVAKEVDVGPVSSYDLRELTSL
MEYSVAIFALYDDGQSEPLTDGFTTTPVPGPLNLRSRDVGADRFKVSWDHSTEDIVLYRL
SWAPFAGGDTTEVILSGGENEYIVSDLSPSTEYEVMLTAIFXDESESDTVSVIETTLATM
PTPTTVERKAVKNLYLSGETTQSLDASWEMDDPNVASYRVSFIGLSKDQKEKFVSVGGGQ
KRVLLQPLHADTEYKVTVTPVYRDGQDGMSASALGSTFPLLSPENLRVSEESYNHFRVSW
DPPQSPTVGYKIVYQPIYVQGPVLETTVGEDMNSILLLNLLSGTEYNVQVTASYPAGQSE
TLLINGKTLFLGVSGLSTYQVRPNSMCVQWQPLLHATMYRVSIQSTLNGQRQEVNLGGAA
SRQCFYDLTPSSQYQISVYAQMQEVEGPSVSVTDMTLSAPTQGPTEPPTTEPPPTIPPAK
EVCKEAKADLVFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAVAQFSDDART
EFQLSSHGNKEALLEAIQKISYKGGNTKTGRAIKHVKESIFTQAAGARRGVPKVLVVLTD
GRSQDDVNKVSKDMQTEGYIIFAIGFADADYGELVNIASQPSDRHVFFVDDLDAVKKIEE
QLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSAIAGVSLEPGSFNSYPCYR
LHRDALVLQPTRYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNEPMVGLILDN
SGKTLAFFNYDYRGDLQTATFEGSEIKKIFHGSFHKLHVTISKTSVKVVLDCSVVGEKPI
RASGNITTDGVEVLGRMVQSRGKRDSTAPFQLQMFDIICSTSWASRDKCCELPALRVEEQ
CPPMPHACTCSQDSKGPPGPSGPPGGPGIRGPRGDRGESGVMGPQGPMGEAGPPGPSGPP
GPQGPNGLSIQGPPGTRGEKGERGEIGSAGPMGVPGSPGSPGRDGPPGLRGQPGNSGPQG
RQGPPGPIGVPGAPGAPGPGGSSGHPGDQGLPGSAGTKGDKGERGEVMSQSAVRAIARQG
PPGPIGVPGAPGAPGPGGSSGHPGDQGLPGSAGTKGDKGERGEVMSQSAVRAIARQVCEQ
LIQSYLSRYNSILNQIPLQSSTSVRTVPGPPGEPGRRGPPGPQGEAGPPGRPGFPGTNGQ
NGQPGERGLAGEKGDRGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPPGRPGNPGTAGRPG
NPGATGPAGPPGYCDQNSCLGYNVGVQALPHGDYQPYRERYDPAAVAYGHDRGGGEEDQE
EDQDPYGYPSPLAYGHYPGHSEDVELRSPGVVRRYSRDVIMEESEYGRPKKGGLTLSA
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgacaggagaggtcaggtggcgtttgtgggccccgttggtggtactggccctt
gtttcctggcaccccagcagggcacagggtcaggtttcagctccacggaggctgcgtttt
aaagtgcagagtcccagcaaactccttgtttcatggcgggagcccaaaggagacgttgac
agctatttatttttctacaacagcataccaggtggtcaacagaaggaggtcatagtgtct
aaatcggacacaaacgtgttaataacagactacaaaccttcaagggagtatgttttcagt
gttattgctgttcgaggcagaaagcagagcagtccgcttcacggcagatttaaagctcat
aaagttgaaagaggtgatgggcgagatcagactgagcctcatcggcagacagacccagct
ggacctcctgacgatgccaacgagatctctggagctgatcagttcgtgtgtcgcactgaa
gccattgcagatattgtgattctggtggacggctcgtggagcattggtcggatcaatttc
agactggtccgcacgtttctggaaattttggtcaatgcctttgacgttggcattgataag
acaagaataggtctggcacagtacagcggggatcccaggatagagtggcatcttaatacg
tactccaccaaggatgcagtcrttgaagcagtcaggaatctgccctacaaaggaggaaac
actctcacaggccttgcactaaattttatatctgagcactgtttcaaatcggactttggc
tcacgggtcggtgtgccaaagattgggatcctcatcacagatggaaaatcacaggatgat
gtaatcccaccagcagaaagcctgcgggaggctggtgtcgagctgtttgctattggtgta
aagaatgctgatgagaatgagttgcgctccatcgcctcggagccagaggacactcacgtc
tacaatgtggctgacttcaacgttatgagctcgatagttgagggactgacgaaaacagtg
tgtgaacaagtggagcagcaagacaaagaaatcaagcagaaagagaaaactggaatgccw
tttaaactggagacatcagaggtcactgcccaaagctttcgagtctcctggagccctgca
cctggaaacgttagaaagtaccgagtggtttattatcctgttcaggaagacgaaccacag
gaggctgtggtggtcggcagtgagacgtcggtggtgttgcagcatctcagctctctgact
gagtaccagctcgctgtgtatgctgtgtacgcaaatgaggcaagtgaagctctgagagga
tcagaaacgaccttggctctcccgtcagtgaccagcctccagctgtttgatgtgactcaa
agcaccatgaaagccagatggaatcgtgtggatggagtttcaggctacatgctgctgtat
gctcctcttacagaagatggggacttggataggatggagatgaacgtacctgacacagtg
acagacgtggagctggacggcttgatgcctgaaactgaatactctgtmactgtttttgcc
atgtatggagaggaggccggtgaccctgttacacaacgggaaaccacgttaccgctgaat
cctcccaagaacctccagttttctgacgtcactcacaactccgcccacatcagctgggac
caagcatccggtggagttaaaggttaccgcatcaagtgggtcatggcagatggacaagtc
gcaaaggaggtggacgtgggtccagtgagttcctacgacctcagagagctgacgtctctg
atggagtactctgtggccatctttgctctgtacgacgacgggcaatcagagccgctcaca
gacggcttcactaccacaccggtgccgggtcctttaaatctgcgctccagagatgttggt
gcggacagatttaaggtcagctgggatcactcgacagaggacattgttctctacagactc
tcctgggcgccattygctggtggcgacacaacggaggtgattctgagtggaggtgaaaac
gaatacatcgtctcagatctcagtccatccactgaatacgaggtcatgctgacggccata
ttckcagacgaatcggagagtgacaccgtctctgtcatagagaccacattggccacgatg
ccaacgccgactacagtggagcggaaggctgtgaaaaacctttacctgagtggcgagacc
actcagagtttggatgcatcgtgggagatggatgaccccaatgtggcgagctacagggtt
tccttcatcggcctcagcaaggaccaaaaggagaagtttgtatcagttggtggaggtcag
aaacgagtgctgcttcagcctttacacgcagacacagagtacaaagtgacggtcacacct
gtgtacagagatggacaggacggcatgagtgcttctgctttgggatccacatttcccctc
ttgtcaccagaaaatctacgtgtgtcagaagagtcatacaaccacttcagggtctcctgg
gatccacctcagtctcctactgtgggatacaagattgtttaccagcctatctatgttcaa
ggtccggttttggagacgacagtcggcgaggacatgaattccattctcctcctcaacctg
ctgagtgggacagagtataatgtccaagtgacagcttcctaccctgcaggacagagtgaa
acgctgctaataaatggaaaaacattgttcctcggtgtctccggcttgtccacctaccaa
gtgcgtccgaacagcatgtgtgttcaatggcagcctcttctacacgctaccatgtacaga
gtctccatacagtccacactcaatggtcagaggcaggaagtgaacctgggcggtgcagct
tcccgccagtgtttctatgacctcacacctagcagccaataccagatcagcgtttacgca
cagatgcaagaagtggagggaccgtcggtgtccgttactgacatgacactgtctgcaccc
actcagggtccaaccgaaccccccaccacagagccccctcccaccatcccacctgcaaaa
gaagtgtgcaaggaggccaaagctgacctggtgttcctggttgatggctcctggtccatc
ggagatgataatttcatgaagatcacccgtttcctctacagcaccatggggtcattggat
ctgattggaccagatggcacccaggtggccgttgctcagtttagcgacgatgctcggaca
gaattccagctgagttcccatggcaacaaggaagccctgctggaagccattcagaagatc
agctacaagggaggaaacaccaagacaggtcgagccatcaaacatgtgaaagaatccatt
ttcactcaggcagcaggagccaggagaggcgttccaaaggtcctggtggttctgactgat
gggcgttcacaagacgaygtcaacaaagtctcaaaggatatgcaaacggaaggctacatc
atctttgcaatcggctttgcggatgcagactacggcgagctggtgaatattgccagtcag
cccagcgatcggcacgtgtttttcgtggatgatctggatgctgtgaagaaaatagaggag
cagctcatcacctttgtctgcgaggctgccactgccacgtgtccgtcagtgttgatgagc
ggtaacacaatggcaggtttccgaatgatggagaagtttggcctggtggagaaagaatac
agcgccatagctggagtttctctggagcccggttccttcaacagctacccctgttacagg
ttacaccgggacgctctggtgctgcagcccacaaggtaccttcatcctgaaggtttacca
tctgactacaccatttctatgatgctgcgtttacttcctgagactccgcaggagcccttt
gcattgtgggaaatcctcaacaaagacaacgagccgatggttggcttgattcttgacaac
tctggaaagacgttggctttcttcaactacgactacagaggagacctccagaccgctacc
tttgagggatcagaaattaaaaagattttccatggcagctttcataagcttcatgtcaca
atcagtaagacgtcggtgaaggtggtgttggactgttctgtggtgggagagaaaccaatc
agggcctctgggaacatcaccacagacggagtggaggtcctcggacgaatggttcaatcc
cgaggcaaacgagacagcactgcgcccttccagctgcagatgtttgacatcatctgcagc
acgtcctgggccagtagagataagtgctgtgagctgcccgcactgagagttgaagagcag
tgtcctcccatgcctcacgcctgtacctgctcccaggacagcaaaggacctccaggaccc
tccggaccccctggtggaccaggaataagaggacccmgaggagacagaggggagtcagga
gtgatgggacctcaagggcctatgggagaagctggcccacctggaccttcaggaccgcct
ggtcctcagggacccaatggactctccattcagggacccccaggcacccgtggggagaaa
ggagagagaggagaaatcggatcagcgggaccaatgggtgttcctggaagtcccggctca
ccaggcagagatggcccaccmggactgaggggtcagcccggtaacagtggacctcaagga
cgacagggacccccaggacctattggagtcccaggagctccaggtgctccaggaccaggt
ggatcctcagggcatccaggagatcagggacttcctggctcggctggtactaaaggagat
aaaggagaaagaggtgaggtgatgtcccagtctgcagtcagagccattgcacgacaagga
cccccaggacctattggagtcccaggagctccaggtgctccaggaccaggtggatcctca
gggcatccaggagatcagggacttcctggctcggctggtactaaaggagataaaggagaa
agaggtgaggtgatgtcccagtctgcagtcagagccattgcacgacaagtgtgtgagcag
ctcatccaaagttatttgtctcgctacaactccatcttaaaccagatccccctccagtca
tcaacatcagtcagaacggtaccaggaccgcctggagagccgggtaggagaggtcctcct
ggtcctcagggagaggcgggccctcctggcaggcccggtttccccggtaccaacggtcag
aatggccaaccaggtgaaagaggtttagcaggagagaagggcgacagagggagtccaggc
gttgggagccagggccctcgaggaccacccggtcctcctggtttgccaggtgaaggacga
acaggcagccaggggccgcctggtcggcccggtaacccaggtacagcagggagacccggt
aatccaggagccacgggacccgctggcccaccgggatactgcgatcagaactcgtgtcta
ggatacaacgttggagtccaagccctccctcacggcgactaccagccctacagagagcgg
tacgaccccgctgcagtcgcttacggccacgaccgaggagggggcgaggaggaccaagag
gaggaccaggacccttatggttacccctctccgttggcctatggtcactacccgggccac
tctgaggacgtggagctgaggtcaccgggtgtggtcaggaggtattcgcgtgatgtcatc
atggaggagagcgagtatggacgaccgaagaagggcggactcaccttaagtgcttga
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