Austrofundulus limnaeus (annual killifish): 106527959
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Entry
106527959 CDS
T06063
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106527959 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106527959 (nedd1)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
106527959 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
106527959 (nedd1)
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
106527959 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IFT122_1st
Beta-prop_Vps41
KNTC1_N
DUF7899
Motif
Other DBs
NCBI-GeneID:
106527959
NCBI-ProteinID:
XP_013878440
UniProt:
A0A2I4CEM0
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVSMAPLEQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSSPVPVVDLAEGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKSKRLHRSLKDHKE
EVTCVSFNANDSCVVSGSTSGDLVLHSLTTILSSRAFGHGSNQPIHDLRLSTVKRSLLGS
VSDSGTVVLWDSNTQRELQVFDSAHKAPGSGLAFSPTSDLLVVSVGLDKKIVCYDTASKI
VLRTIRVESPLTCVDFMLDGTGLVVGSTQGKIYQYDLRNTSTPTKTTVAHKTSVTCLRFQ
SNTSRHKSSKLGPTKISSSKRISSKLPSSHSDSASSTGPAPHQQVTSTGGASVEAQVQQG
EEPLPPVEKFSSVGRNSLDIFSPTREGPDPGNQGKTGETPFGRTNVSGLDLMSREGEGQH
LVGRGSLDIFSPVREDSGPGSQWRTPLGASAGRSYSHLSVFQSPPPIREEEPISAEPEKS
GGSGLEGEAQTPPITSQQTNQYQPAPPFLTPEPSLCRANGVQSQLSYDSPVFTTPPPTAA
ASGPAAAAAAVSSLSQNIADVVGQGGATPLTPLQTHFIQNMIHETLEEFRTSCHLDIVNL
QVEMIRQFYIQLTEIHGLLEKYSVNESLVEEIKKLREENRRLRADY
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacacgcctggtgtccactggagactgcgtgaagatctgggatgcggtt
tccatggcgccgctggagcagttcaatcctcacagcagcagccacccggtcgctcaggcc
tgctggagctccaacaaccagtacctggtgagcgccagcagcagcggagacaaactggtg
gtttccagtctgaagtccagtccggtcccggtggtggacctggcagaggggaaaaaacag
acccgagtgtgtctgagctcctcgtctcagttcctggtcagcgggggtctggatcactgc
gtccacatctgggacctgaagtccaagaggctgcaccgctccctgaaggaccacaaagaa
gaggtgacctgcgtgtccttcaacgccaacgacagctgcgtggtctcgggctccaccagc
ggggacctggtcctccacagtctgaccaccatcctgtccagcagagcctttggccacggc
agcaaccagcccatccatgacttgcgtctgtccacggtgaagcgctccctgctgggcagc
gtgtcggacagcggcaccgtggtcctgtgggactccaacacccagagggagctgcaggtg
ttcgacagcgcccacaaggccccgggctccggcctggccttctccccgaccagcgacctg
ctcgtcgtcagcgtcggcctcgacaagaagatcgtctgctacgacacggccagcaagata
gtcctgaggacgatccgtgtggagagtcctctcacctgcgtggacttcatgttggacggt
accggtctggtggtcggctccactcaggggaagatctaccagtacgacctgaggaacacc
agcacccccaccaagaccaccgtggcccacaagacctccgtcacctgcctgcgtttccag
agcaacaccagccgacacaagtccagtaaactgggacccaccaaaatctcaagttcaaaa
agaatcagttccaaactgcccagcagccactctgactccgcctccagcactggccccgcc
ccacaccagcaggtgaccagcacaggaggcgccagtgttgaggctcaggtccagcagggg
gaggagcctctccctcctgtggagaagttcagcagtgtgggacgaaacagtctggatatc
ttctctccgactcgtgaaggtccagacccggggaaccagggtaagaccggagagaccccg
tttgggagaaccaatgtttcaggtttggacctgatgtccagggagggggagggacagcac
ctggttggacgtggaagtctggacatcttctccccggtccgagaagactcaggtccagga
tcccagtggaggacacctctgggggcgtctgcagggcggagctacagccacctgtccgtc
ttccagtccccgcctccgatcagggaggaggagccaatcagcgctgagcctgaaaagtcc
ggtgggtccggtctggagggcgaggctcagactccgcccatcacatcccaacaaaccaat
cagtatcagccggccccacccttcttaacccccgagcccagcctctgcagagcgaacggc
gtccagtcccagctgagctacgactcacctgtcttcacgactccgccccccaccgcagca
gcttcaggtccagctgcggcggcggcggccgtgtcctcactgtcccagaacatcgcagac
gtggtgggacagggcggagccaccccactgacgcccctgcagacccacttcatccagaac
atgatccacgagaccctggaggagttcagaacctcctgtcacctggacatcgtcaacctg
caggtggagatgatccgacagttctacatccagctgacggagatccacggtctgttagag
aaatattcagtcaacgagtctctggtggaggagatcaagaagctgagagaggagaaccga
cgcctgcgagccgactactga
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