Austrofundulus limnaeus (annual killifish): 106528029
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Entry
106528029 CDS
T06063
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106528029 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alim04054
]
106528029 (dhx58)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106528029 (dhx58)
Pattern recognition receptors [BR:
alim04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
106528029 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
AAA_19
PhoH
Motif
Other DBs
NCBI-GeneID:
106528029
NCBI-ProteinID:
XP_013878529
UniProt:
A0A2I4CEW3
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MADFGLYNYQKEVIQRALLRENIIIWLPTGGGKTRAAVYVAKRHLETTENAKVVVLVNKV
HLVNQHFANEFEPALGSQYRLVKVSGDSDEKDFFGKVIQSKDVIICTAQILYNAMINKEE
SKHTELSDITLLIIDECHHTHKEEVYNKIMRIYVEKKLKGEGPLPQILGLTASPGTGGEE
XLEGAVKHILQICSNLDSAIVSTENHKTELKKMVPKPRKTFDIVEKRFADPFGDHLKWMM
HQIHEFMNLPSDVRLRECGTQEYEADVVELEKRGVRDKNRVVSQCARHLRQYSDALLIND
TLRMQDAFHSLEDFYNSELSSAIDGTDIFLVGLFEENQVELNDLATNPCFENPKMAKLEE
VLLNQFGSGVPSKGILFSKTRKSTRCLNDWVRQNRALQRAGIKPAILTGAGNGIDYMTQN
EQADTIRNFRRDKLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARGSQ
YSVVAQEGGREVHREHHNEALEELTAQAIAKVQRMSAPEFRREITRLQTETILSNKLSEE
RKMEKRNRYPASGVQLLCRNCFREVASASDIRLLENAHFVNVNSDFKNYYKRGENLTLSK
TFEDWEPGCTVLCNNGNCNKKWGFEIQYKDCLLLPMLAIKNFALETPEGRQTVKKWKDVS
FVVEDFNFEEYGLSIHPDLFD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgggctgtataactaccagaaggaggtgatccaaagggctctgctgaga
gaaaacatcattatttggctgccaacaggaggtgggaagaccagagctgctgtatatgtg
gccaaaaggcatctggagaccaccgaaaatgctaaggtggtggtcctggtcaacaaggtc
cacctcgtgaatcagcatttcgccaacgagttcgagcctgctctgggaagccaatacagg
cttgtgaaggtgagcggagacagcgacgagaaggatttcttcggcaaagtgattcagagc
aaagacgtcatcatctgcacagcgcagatcctttacaacgccatgatcaacaaggaggag
tcgaagcacacggagctgtcagatataactctgctgatcatcgacgagtgtcaccacacc
cacaaggaagaggtctacaacaaaataatgaggatctacgtggagaaaaaactgaaagga
gaggggccgttgccacagatcctgggtctcacagcgtcgcccgggacaggcggtgaagag
ttmctggaaggtgctgtgaagcacatcctgcagatctgctccaacttggactcagccata
gtctcaactgagaaccacaaaactgagctgaagaagatggtacccaaacccagaaagacc
tttgatattgtggagaaacggttcgctgatccatttggagatcayctgaagtggatgatg
catcagatccacgagttcatgaaccttccttctgacgtcaggctgagagagtgcggcacg
caggagtacgaggccgacgtggtggagctggagaagagaggagttcgagacaagaacaga
gttgtgtctcagtgcgcgcgtcatctcagacagtacagcgatgccttgctcatcaacgac
acgcttcgaatgcaggatgcttttcactccctggaggacttctacaactcagagctctcc
tcagccatcgacggaacggacatcttcctcgtggggcttttcgaagagaaccaggtggag
ctgaacgatctggccacaaacccctgctttgagaatccaaaaatggccaagcttgaggag
gttcttttaaaccagttcggttctggcgtcccgtctaagggaatccttttcagtaaaacr
cgcaaaagcacccgctgtctcaacgactgggtccgccagaaccgggccctgcagagagct
ggcatcaaaccagccatcctcactggggcgggcaacggcatcgattacatgacgcagaac
gagcaggccgacacgatccgcaacttccgcagggataagctcaacctcctgatctccacc
agcgtggcggaggaaggcctcgacattcccgagtgcaacctggtggtccgttacgggctc
ctcaccaatgagattgcccagcagcaggccagcgggcgcgcccgagccagaggcagccar
tactcggtggtcgctcaggaaggagggcgggaggtccacagagagcaccacaacgaggcc
ctggaggagctgaccgcacaagccatcgctaaggtccagcgtatgagcgcgccagagttt
cgcagagagatcacacgccttcaaaccgagaccatcctttccaacaagctttcagaggaa
cgtaaaatggagaagaggaaccgctaccctgcgtccggcgtccagctgctgtgtagaaac
tgcttcagagaggtggcttcagcgagtgacatcagacttcttgaaaatgcacactttgtc
aacgtmaactctgattttaagaattattacaaacgtggcgaaaatctgacactgtcaaaa
accttcgaggactgggagcctggatgcacggtcctttgtaataatggcaactgcaacaag
aagtggggatttgaaatccaatacaaagactgcctcctgctgccgatgctagccattaaa
aattttgccctggagactccagagggaaggcagaccgtgaagaagtggaaagatgtttct
ttcgtggtggaggactttaactttgaagagtacggcctcagcatycaccctgacttattt
gattaa
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