Austrofundulus limnaeus (annual killifish): 106528180
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Entry
106528180 CDS
T06063
Symbol
sox21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106528180 (sox21)
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106528180 (sox21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106528180
NCBI-ProteinID:
XP_013878743
UniProt:
A0A2I4CFI5
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKINGLAGGALSDSV
IGNPDKAAAAAAAAARVFFNPSMSTNPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAFS
GTGGVGGGTHTHSHPSPGNPGYMIPCNCSAWPTAGLQPPLAYILLPGMGKPQLEPYPAYA
AAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgtccgatgaacgctttcatggtctggtccaga
gcccagcgcaggaaaatggcccaggagaacccgaagatgcacaactcggagatcagcaag
agactgggagcggagtggaaacttctcaccgagtcggagaagaggccgttcatcgacgag
gccaagcggctgagagccatgcacatgaaggagcaccccgactacaaatacagaccgagg
cggaagcccaagaccctgatgaagaaagataagttttccttcccggtgccctacaacctc
ggggagcacgacgcgctgaagattaacggactcgccggaggagcgctttccgactcggtc
attgggaacccggacaaggcggcggccgcggcggccgcggcggcccgggtcttcttcaac
ccgtccatgtccacgaacccctattcattttttgacctgggctccaagatgaccgagctc
tcccctccttcgttcccctacgcctcccctttgggctacccgcccgggggcgcgttctcc
gggacgggcggtgtgggcggcgggacgcacacccactcccacccgtccccgggcaacccg
ggctacatgatcccgtgtaactgttcggcctggcccacagcgggactccagccgcccttg
gcgtacatcctgctcccggggatggggaaacctcagcttgaaccgtaccccgcgtacgcc
gcggcgttatga
DBGET
integrated database retrieval system
