KEGG   Austrofundulus limnaeus (annual killifish): 106528314
Entry
106528314         CDS       T06063                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03013  Nucleocytoplasmic transport
alim03015  mRNA surveillance pathway
alim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106528314 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    106528314 (rbm8a)
   03015 mRNA surveillance pathway
    106528314 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106528314 (rbm8a)
   03041 Spliceosome [BR:alim03041]
    106528314 (rbm8a)
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106528314 (rbm8a)
Spliceosome [BR:alim03041]
 Complex C
  Other components
   EJC/TREX
    106528314 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 106528314
NCBI-ProteinID: XP_013878911
UniProt: A0A2I4CFZ4
LinkDB
Position
Unknown
AA seq 186 aa
MRRESLTRRDIMADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGPRSR
AKEDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRR
TGYLKGYALVEYETYKEAQAAMEGLNGQELMGQTISVDWAFVRGPPKNKRRGGGRRRSRS
PDRRRR
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaggcgggagtcgctcacgcgcagagacatcatggcggacgtgttggatcttcatgag
gcgggaggcgaggactttcctatggatgaggatggtgatgagagcatccacaagctaaaa
gagaaagctaagaagagaaaaggacgaggctttggcctagaggagggacccaggtccaga
gctaaagaagactatgataccgttgaacaggatggggatgagccaggtcctcaaagatct
gtggagggctggatcctgtttgtgactggcgtgcatgaggaggccacagaagaagacatc
catgacaagttttcagagtttggcgaaatcaaaaacctgcatctgaaccttgatcgtaga
acaggttacttgaagggctatgcgctggtggagtatgagacgtacaaagaggcacaggca
gccatggaagggctcaatggtcaggaactgatgggtcagaccatcagtgtagactgggca
ttcgtcagaggaccccccaagaacaaaaggaggggtggcgggcgaaggcgcagcagaagt
ccagacagaagacggcgttga

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