Austrofundulus limnaeus (annual killifish): 106528335
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Entry
106528335 CDS
T06063
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim02010
ABC transporters
alim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106528335
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106528335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alim02000
]
106528335
Transporters [BR:
alim02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106528335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
106528335
NCBI-ProteinID:
XP_013878938
UniProt:
A0A2I4CG36
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MKSFLNLCVSQQLSSMKSWKDMRKEILYLTADTTGSPKQVYEAVSRIVCGHPEGGGLKIK
SLNWYEDNNYKALFGHHGNDSDSEPVSTYDNSSTPYCNNLMKSLESTPISRMIWRALKPL
LMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGMWEEMKPKFWNFLENSEEMDLVRS
LLQSNVSAAFLNTQLSGIEWSVSDVANFLSKASEERKPAGSTYTWRDVFNETDRAIRTIS
QFMECVNLDKLEPVANEERLVNKSMGLLSNQKFWAGIVFPDIARNNSTDLPPNVNYKIRM
DIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQDVIEQGITRAITGTKERTGIY
IQQMPYPCYVDDMFLQVMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLNN
GTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSGVVFLFLGSFGVVTIMQCFLIST
LFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKIVVSVLSPVAFGFGCEYFALFE
EQGVGIQWSNLLVSPMKEDSYNLTTSICLMLFDAVLYGIMTWYIEAVFPGQYGIPRPWFF
PFTRSYWCGEKENKNLNTPMSKKGNADAVCMEEDPSHIEPGVYIENLVKVYSHGNKLAVD
GLSLKFYEGQITSFLGHNGAGKTTTMSVLTGLFPPTSGTAYILGKDIRSELSTIRQNLGV
CPQHNVLFSMLTVEEHIWFYARLKGLSEERVKAEMEQIVNDVGLPHKRKSRTSTLSGGMQ
RKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRQGRTIILSTHHMDEADILG
DRIAIISHGKLCCLGSSLFLKTNLGTGYYLTLVKRDYDLSLQSCRNSASTVSYSKKTEKE
DSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVPEARLVEDLGHELTYILPYQSAKD
GAFVELFHELDDRLMDLGISSYGISDTTLEEIFLKVAEDSGVDSVELSDGVVPTRIRRRH
AFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADGKGSFQVKGWSLKRQQFVALLW
KRFLYARRSRKGFFAQIVLPAVFVCIALAFSLIVPPFGKYPSLALHPSMYGEQFSFISND
IPEDLHINKLQQALTEKPGFGTHCMEDKPIPNTRCNAVEDEWAVPPVPQTVRDVFDKGNW
SMENPSPLCECSCGKRKRMLPECPAGAGGLPPPQMKLSDTDTLQNLTGRNVSDYLVKTYA
QIIGKSLNNKIGVNEFRYGGFSLGARNSQVLPHKEEIDVAIAQLRRRFHLDRGTAADRFF
RSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNAVLRASLPPGKDPAKFGITAYNH
PLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVTKAKHMQFISGVQ
PFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSSTNLPVLALLLLLYGWSITPLMY
PASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSNEIGGINDILKNVFLIFPHFC
LGRGLIDMVKNQAMADALERFGN
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagctttttaaatctgtgtgtctctcaacagctttccagtatgaagagttggaaa
gacatgcgaaaggagatcctgtatctgaccgctgatacgacaggatctccaaagcaggtg
tacgaggccgtgtcacgaatcgtctgcgggcatccagagggaggtggcctcaaaatcaag
tctctcaactggtatgaagacaacaactacaaggccctgtttggacaccatggcaatgac
agcgacagcgaaccagtctccacttacgacaactcttccactccttattgtaacaacttg
atgaagagtttggagtccacccccatttccaggatgatctggcgagccctaaagcctctt
ctcatggggaagattctgtacaccccagatactccagcaacacagaggatcatccatgag
gttaataagaccttccaggagctgggtgtcctaagagaccttggtggtatgtgggaggag
atgaagcccaaattttggaatttcttggagaatagtgaagagatggatttagtcaggtcc
ctgctccaaagcaacgtcagtgcagctttcctgaacacccagctcagtgggattgagtgg
agcgtgtcagacgtggcaaacttcctatcgaaagcgtcagaggaacgcaagcctgcaggc
tccacgtacacctggagagacgtcttcaacgaaaccgaccgggccatacggaccatttca
cagttcatggagtgtgtgaacttggacaagttggagccagttgccaatgaggaacgcctg
gtcaacaagtccatgggtcttctgagtaatcagaagttctgggctgggattgtgtttcca
gacatcgctcgtaacaacagcacagacctgcctcctaacgtcaactacaaaatccgcatg
gacatcgataatgtggagaggactaacaagatcaaagatggatattgggaccctggtccc
agagcagacccctttgaggaccttcggtacatctggggtgggttttcctacctgcaggac
gtcattgaacaaggaatcaccagagccatcaccggcaccaaggagaggacaggcatctac
atccagcagatgccttatccctgctacgttgatgacatgttcttgcaagtgatgagcagg
tcaatgcctctcttcatgactttggcatggatgtactctgtagccatcatcatcaagggc
gtcgtgtacgagaaggaggcgcggctgaaggaaaccatgaggatcatggggttgaataat
ggcaccctgtggctgagctggttcatcagcagtttaatccctctgctgatcagcgctggc
ttgttggtgatgttattgaagatgggaaacctgctgccttacagtgactcgggcgtcgtg
tttcttttcctgggatccttcggcgtcgttaccatcatgcagtgctttctcatcagcact
ttattttctcgtgccaacctggcagcagcctgtgggggcatcatttacttcactctttat
ctgccgtatgttctgtgcgttgcttggcaagactacgtgggcttcggtgccaaaattgtc
gtgagcgtactttctcctgtggcttttggctttggatgtgagtactttgccctgtttgag
gagcaaggagtgggaatccagtggtccaacttgcttgtgagcccaatgaaggaggacagc
tacaacctgaccacctcgatctgcctcatgttgtttgacgcagtgttgtacggaataatg
acttggtacattgaagctgtgttccctggtcaatacggtatcccaaggccttggtttttc
cctttcacacggtcgtactggtgtggagagaaagaaaacaaaaacctcaacactcctatg
tcgaaaaagggaaacgctgatgctgtttgcatggaggaggatccgagccacattgaacct
ggtgtttacattgaaaatctggtgaaggtctacagccatggaaacaagctggccgtagat
ggactgtccctgaagttctatgagggacagattacctccttcctcggccacaatggagct
ggcaagaccacaactatgtcagtcctgacaggtttgttcccacccacttctggcactgcc
tacatccttggcaaagacatccgcagcgagctgagcaccatccgacagaacctgggcgtc
tgcccccagcacaacgtgcttttcagcatgctgactgtggaagagcacatctggttctac
gctcgcctaaaggggctttccgaggagcgggtgaaagctgagatggaacaaatcgtaaac
gacgtcggcctgcctcacaagcgcaagtcgcgcacaagcactctgtcaggtgggatgcag
aggaagttgtctgtggctttggcgtttgttgggggctcaaaggttgtgattctggatgag
cccactgctggtgtcgatccttacgcacgaagaggaatctgggacctgcttctcaagtac
agacagggtcgcaccatcatcctgtccactcatcacatggatgaagctgacatcctgggt
gaccgaatcgccatcatttcccatggcaagctgtgctgtttgggatcctctctcttcctc
aagaccaacctcggcacaggctactacttgactctggtcaagagagattatgacttgtcc
cttcagtcctgcaggaactctgccagcaccgtctcctacagcaagaaaacagaaaaggag
gacagtgtatcagagagcagctcagatgctggcctgggaagtgaaccagaaagtgaaacc
accaccatcgatgtctccctcatctccaacgtgatctttaagcatgttccagaagctcgt
cttgtagaagatctgggccatgagctcacttacatcctgccctaccagtcagctaaagac
ggagcttttgttgagctcttccatgagctcgatgaccgactcatggacttgggaatttca
agttatggaatatctgataccaccctggaagagattttcctgaaagtggcagaagacagt
ggagtggattctgttgagctttcagatggagttgtaccgaccaggatccgtcggcgtcat
gcattcggagaccaccagagctgcctgaagcccttcaccgaggatgactttgacttcaac
gactctgaaggtgacccagaatcccgtgaaacggactggcttggaggagcagacggcaaa
ggctcattccaggtcaaaggctggagcctgaagaggcagcagtttgtggctttgctctgg
aaacgattcctctatgcccgtcgctccaggaaaggcttcttcgctcagattgttctgccg
gcggtgtttgtgtgtattgcacttgcgttcagtcttattgttcctccgtttgggaagtac
cccagtctggctctgcaccccagcatgtacggagagcagttttcctttatcagtaatgat
attcctgaggacctgcacatcaacaaactacagcaagctttgacagaaaaaccaggcttt
ggaacgcactgcatggaagacaagcccataccaaatactcgctgcaacgccgtagaagac
gaatgggcggttcctccagttcctcaaactgtacgagacgttttcgacaaaggcaactgg
agcatggagaatccctctccgctgtgcgagtgcagctgcgggaagcgaaaacggatgctg
cccgagtgtcccgctggggccggaggccttccgccaccacagatgaagctcagcgacacg
gacactctgcagaatctgactggcagaaacgtgtccgattatctggttaaaacctacgct
cagatcatcggcaagagcctgaacaacaagattggggtcaacgagttcagatacggtgga
ttctcactgggtgccagaaattctcaggttctgcctcacaaagaagaaattgatgtagcg
atagcacagctaaggagacgctttcatcttgacagaggaactgcagccgatcgtttcttc
cgcagtctctccagttttatccaaggtttggacaccaagaataacgtcaagatctggttt
aacaacaagggctggcacagcattggttctttcctcaacgtgatgaacaacgctgtcctg
cgggcgagccttccgcctggaaaagaccccgcaaagtttggcatcaccgcctacaaccac
ccactgaacctgactaaggagcagctgtcgcaggtcgctctgatgacaacatctgtggac
gttctggtgtcaatttgtgtgatcttcgccatgtccttcgttcctgccagttttgtggtt
ttcctcatccaggagagagttacgaaggccaagcatatgcagttcatcagtggagtgcaa
cccttcctgtactggctggcaaactttgtctgggatatgtgcaactacatcgttccagcc
actctggtgatcatcatatttgtgtgtttccaacaagaagcctatgtgtcttccactaat
ctgccagtgctggccctgctgctgctgctctacggctggtcgatcacccctctgatgtac
ccagcctccttcttctttaagatccccagcactgcctatgtggttctaaccagcgtcaac
atactgatagggatcaatggcagcgtgtccacgtttgtcctggagttgttcggaagcaat
gagatcggtggcattaatgacatcttgaagaacgtgttcctcatttttcctcacttctgc
ctgggtagaggactgattgacatggtgaagaatcaggccatggctgatgctttagagaga
ttcggtaactaa
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