Austrofundulus limnaeus (annual killifish): 106528911
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Entry
106528911 CDS
T06063
Name
(RefSeq) uncharacterized protein C9orf84 homolog
KO
K28108
shortage in chiasmata 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106528911
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106528911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
Motif
Other DBs
NCBI-GeneID:
106528911
NCBI-ProteinID:
XP_013879649
UniProt:
A0A2I4CI43
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MMDEKNSFGPNEPFCAIRFKALDYVFETSTTLKVTMNLLTLPAPYLTSTSDLYPHRGKLV
DGTYRTPWIRGKVISSCKLFVGGSVLDELEGKNQPMNSLERFFVENXEEVIPSSNPDSLE
DFDQDQLKQSQINDPFQESFFKCTPDQRTSENQIKALFINEELIPVDYLPHLRRHLPSLS
AKLSRLKTLPVADPLLSPAGLAISEDAMFSCFRGCASYEKPPDVDSVNRQTCADVQEFLK
EPLLEGEQLLLPDVVDTLQLDPPNCDVSSWMNVSPEPLDEPSSVLELLQNASFPKTSVDI
SQYDEPRELKENKLNQSLIESEFSGRVLPPAELELDVILSPISKKSPNIFCLSAARLQEE
ELSPLSITSLVSAKTQKIMEAAVWKAEKHPTYVAGFLLSEPHINEPAWDFQPLSEVLSAF
KLEKQSFSEDKSELQVFLGQSREFTEKMTTENLITRDNDEVEDFQKLLPEDLEVESIVLD
FQNKALLRKEASVASPQSSLMPALSTINKKEKPVAAVSTNANILENKFSGAAVKSSAQTN
TLTSADVFKTTQSSQKPDLNLPFSSNLKAKPKSLTCARHQPEKDIDPLSDFITLRSLQAP
PAETSPNSANTEALELYQQTPQKEQRAPPEETRTPDRRTDYMNMAVSGDASREQKPAAQR
TSQSNPQDKRHSRVVQIQATASQQRAYRELLAFALPCLTSARQAGLDFPSWRDFSCLAPD
QTHFLLKQQERSLCRAPAESAELVQDQEMLFNRAALIHVFVTFKELLLKCDLRTALEYLT
EAAEVCDERSLKQLLKRLQIILFLSHSEQEASFKVLELQQLLADRLLSKKGNNSAXKILI
MLSVDSDENRSIIINSLSQVTAAAVLKILILIEFIRAQFVSAAGAAVASLCPDEDNKKLN
GAAVVSSVYDNDCVVVSEQHIGPDFPWTGFSLVVEFDHPGPSPWSSVCSERSIDHVSFNT
SISDSDAETSSWRLEDNVPFTVLVTEGLQNRPLLLQTVESGFNVNVLERSHCPTLQMLGG
IHNYTVITVDESTAVVIQEQDELCEGRASEGLVMRLTALSLQYSSCWLILYCPDSQGGGF
SSEAFNNLVLVYSSLVLFSTKTEELDVKVLIVSQVLEMAKFITQICFTALMSSDRDPVRY
LNRDWLTAMPSQEEVCLSQFPCINPLVSQLMLNRAPSLQWLLGAPLAQLKELFPEVPHKV
LKMFSDTTSLYWNNAEPKDPETNQETSLSQGIHTPFDQSEHMNPVHSELFCSFPHEAMRA
QDPFTEPDSSDFRLDLNRSFGSPKVGLRSSWTRNDVWKEEEKLPLWSHRAAGRVVGRVTD
EWTPRASQNDFPSYLHSDDSPLKLSSTLSCSRTSPHPTIHNELQLPANDHITFSLSPPAD
VPWGLSGTECLSSSREPAAAPASYGSRSWTGLERKRSCEAAGLFESMLEPLKRRRLSYER
VPGRKDGQTRLKLF
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaaaaaaatagctttggcccgaatgaacccttctgtgctatcagatttaaa
gctctggattatgtctttgagactagcaccaccctgaaagtaaccatgaacctactgacc
ctgccagcaccttacctgacaagtaccagtgacctttacccccacagagggaagctggtt
gatgggacctacaggaccccctggatcagaggaaaggtgatctcctcctgcaagctcttt
gtgggaggttcagtgctggacgaactggaaggaaaaaatcaaccaatgaattctctagaa
agattttttgtggaaaacyacgaggaggtgatacccagctctaatcctgactccctggag
gattttgaccaggatcagttaaaacaatcacagattaatgatccattccaggagtccttc
ttcaagtgtacacctgaccagaggacgtcagaaaaccagatcaaagctcttttcattaat
gaggagctcatacctgtggattacctgccacacttaaggagacatttaccctcgctgagc
gccaaactgtccagactgaagacgcttcctgtggccgaccctctgctgagcccggcagga
ctcgccatctctgaggacgccatgttcagctgttttaggggatgtgcttcgtatgaaaaa
cctccagatgtggactctgtaaaccgtcagacatgtgcagatgttcaggagtttcttaaa
gaaccactcttggagggagagcagctgctgctgcctgatgtagtcgacactcttcagctg
gacccaccaaactgcgacgtctctagttggatgaatgtttctcctgaacccctggacgag
ccgagttctgtcctggagctgcttcagaatgcttcttttcccaaaacatcagtggacatt
tcccagtacgatgaaccacgggagctaaaagaaaacaaattgaatcaaagcctgattgag
tcagagttttcaggtcgtgttttgccaccagctgaactagagttggacgtaattctgagc
ccgatwtctaaaaagagtccaaacatcttctgtctgtccgccgctcgtctccaggaagaa
gagttgtctcctttaagtataacatctctggtttcagcgaagactcagaaaatcatggag
gcagcagtttggaaggcagagaagcatccgacctatgtggctgggtttcttctgtcagag
cctcatataaatgaaccagcctgggacttccagcccctgagtgaagttttgtcagctttt
aaattagaaaaacaaagtttcagtgaggacaaatcagagttacaggtgtttttgggccaa
agtcgrgagttcactgagaaaatgacgactgagaatctcataaccagggacaacgatgag
gtggaagacttccagaaactgttacctgaagatttagaagttgaatccattgttctggat
tttcaaaataaagctctactccgcaaagaagccagcgtggcttcacctcagagctccctg
atgccagctctcagcacaataaataaaaaagaaaaacccgttgctgccgtcagcaccaac
gcaaacattttggaaaacaagttttcaggagctgcagtcaaatcgtccgctcaaacaaac
acactcacctcagctgacgtctttaaaactacacagagctcccaaaagcctgatctgaat
ctgccctttagctcaaatctaaaagctaaaccgaagagcctgacgtgtgcgaggcatcaa
cctgaaaaagatatcgaccctctgtctgactttataaccctgagatccctgcaggcgcct
ccagctgaaacatctccaaactcagccaacactgaagctttagagttgtaccaacaaaca
ccacagaaggagcagcgtgctcctccagaggagacgaggacacctgacaggaggacagac
tacatgaacatggccgtttcaggagacgccagcagagaacagaaacccgctgctcagagg
acgagtcagtcaaaccctcaggacaaacgtcacagccgagtcgtgcaaattcaggctaca
gccagccagcagcgggcctaccgtgagctgctggccttcgctctgccgtgtttgacctcc
gccagacaagcggggctcgacttcccttcgtggagagacttcagctgcttggctccggac
caaacccatttcctcctcaaacagcaggagaggtctctgtgcagggctccagcagagagc
gcagagctggtccaagatcaggagatgcttttcaaccgggctgctctgatccacgtgttt
gtgacgttcaaagagctgctgctgaagtgtgacctgaggactgctctggagtacctgacc
gaagcagccgaggtgtgcgatgagcggagtctgaagcagctgctgaagaggctccagatc
atcctcttcctcagtcacagygaacaagaagccagcttcaaagttctggagctgcagcag
ctgctggccgatcggctgctcagcaagaaaggaaacaactctgcayagaaaatwctcatc
atgctgtctgttgattctgacgaaaacagatcaataatcattaacagcttgagccaagtg
acggcagctgctgtgctaaaaatactgatactgatagagttcatcagagctcagtttgtt
tctgctgcaggtgctgctgtggcttcactttgtcccgatgaagacaacaagaagctgaac
ggtgccgctgtggttagcagcgtgtacgacaatgattgtgtggtggtgtcggagcaacac
ataggtccagacttcccctggacgggtttctctctggtggttgagttcgaccacccwggc
ccgtccccgtggtcctcggtctgcagcgagaggagcattgaccacgtctctttcaacacc
agcatctccgactctgatgccgagacmtcctcgtggcgtctggaggacaacgttccattt
acggttttagtgaccgaggggcttcagaaccgtccactgctgctccagactgttgagtca
ggtttcaatgtgaatgtgctggaaaggagccactgtccaaccctgcagatgctcgggggg
atccacaactacactgtgatcacagtagatgaaagcactgctgttgttatccaggagcag
gatgaactgtgtgaagggcgagccagtgagggactggtgatgaggctgacggctctctct
ctacagtacagcagctgttggctcatcctgtactgtcctgacagccagggaggagggttt
tccagcgaagccttcaacaacttggtgttagtttattcatctctggtgctgttcagcacg
aagactgaggaactggatgtgaaggttctgattgtgtcacaagtgttggaaatggccaag
ttcatcacccagatctgcttcaccgccctgatgtccagtgaccgggatcctgtcagrtac
ctgaacagagactggctcactgcgatgccttctcaggaggaagtgtgtctgtctcagttc
ccgtgcattaatcctctggtcagtcagctgatgttgaacagagccccgtccctccagtgg
ctcctgggggcccctctggctcagctgaaggagctgtttcctgaggtgccmcataaagtc
ctgaagatgttcagtgacaccacctccctgtactggaataatgcagaacctaaagacccc
gagacaaaccaggaaacaagtctttctcagggcattcacaccccttttgatcaaagtgaa
cacatgaatcctgtgcattcagagctgttctgcagcttccctcatgaagccatgagagcc
caggaccctttcactgaacccgactcctcagactttagactcgacctgaaccgttccttt
ggcagccccaaggtgggccttcgaagtagctggacccgaaatgacgtgtggaaagaggag
gagaagcttcctttgtggagtcacagagctgcagggagagtggttggaagagtgaccgac
gagtggactccgagggcctctcagaacgacttcccctcatatctgcacagcgacgacagt
cctctcaaactgagctctacgctcagctgcagccgaacgtcccctcaccccacgatccac
aatgagctccagcttcctgcgaacgaccacatcaccttcagtctgagtccccctgcagac
gtcccgtggggtctgagcggcaccgagtgtctctccagcagcagggagccggcagcagct
ccggcctcgtacggctccaggagctggacgggtttggagaggaagaggagctgcgaggca
gccggcctgtttgaatcaatgctggagccgctgaagaggaggaggctgagctacgagagg
gttcctggcagaaaagatgggcagacaagacttaaattattttag
DBGET
integrated database retrieval system
