Austrofundulus limnaeus (annual killifish): 106529077
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Entry
106529077 CDS
T06063
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04517
IgSF CAM signaling
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106529077
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106529077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106529077
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106529077
Intermediate filaments
Intermediate filament-binding proteins
106529077
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
106529077
NCBI-ProteinID:
XP_013879866
UniProt:
A0A2I4CIP1
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MMTTVAAEFDHMELQQQYSSSDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDQPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDHAI
ETERMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYKERV
QAVVAVAKELEAEXYHDIKRIAARKDNVTRLWEYLLELLKARRQRLEMNLGLQRVFQEML
HIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVKAVVTNANRHSVCD
SGYKPCDPQIIQDRVAHLEFCYQELSQLAAERRAHLEESRRLWKFLWELAEEEGWIREKE
QILSSLELGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGQTMVQVGHFGAARIQER
VADLQAQWAALEQLVASRKRRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSVIDSLHEQVAALPRDEAESEEVRGRLAGIEERYREVSELT
KLRKQALQDTLALYKMFSEVDACQVWIDEKEQWLNGMEIPEKLEDLEVIQHRFESLEPEM
NSQASRVAVVNQIARQLVHSGHPSHKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLLAIQDKLGDLQTE
AQQLSEEHPDQAKAITGRLAEITAVWNEMKNTLKTREESLGEARKLQQFLRELDDFQAWL
SRTQTAIASEDMPNTLAEAEKLMAQHQSIKNEVQNYEEDYQKMRDMGEMVTQGQTDAQHM
FLHQRLQALHTGWNELHRMWENRQNLLSQSHAYQLFLRDTRQAEAFLNNQEYILAHTELP
TTLEGAEAAIKKQEDFMTTMDASEDKINAVIEAGRRLAADGNINADRIQERVSSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKLSLLHGTWDKLESTTQTKAQCLFD
ANKAELFTQSCTDLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRQRRNFLVASREIHQFNRDIEDEI
LWAHERMPVATSTDYGHNLQTVQLLIKKNQTVEKEIQGHQPRITDILERSQSLLQDQSSN
TNVIRQRLSDLQQLWKQLMEEVERRHKRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDGQSAVNMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSKVDKL
YAGLKDLSEERRGKLDERLHLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRSLLEACEGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALLA
RKHYASPEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRK
PTPAEPAVVQQEEAQQQQSVVTQNGLPSDQNSPQDAGDDLANGIAEHSSKETSPAPSPTS
GRKTKSQSATLPTKNQDLTWQPEGFLHRKHEWEGHNKKASNRSWHNVYCVIKNKEVSFYK
DSKAAGQGVAYHGEPSVSLKNATCDVASEYKKKKHVFKLRAPNGNEYLFQAKDEEEMSTW
IQAILNAADLSHTEGSNPGTPASVRAQTMPAIVSVGAESSPGKKDKEKRFSLFSKKKQ
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaactgttgcagccgagttcgaccacatggagctgcagcagcagtacagcagc
agtgacacggtcaacaaccgctgggacgacgactgggacaacgagaacagttcagcccga
ctcttcgagaggtcccgcatcaaagcactggcagatgaacgagaggcagttcagaagaag
accttcaccaaatgggtcaactcccacctgtccagggtctcctgcaggatcacagacctc
tacatggacctgagagacggacggatgctcatcaaactgctggaggttctctccggagag
agactgccgaagcccaccaaaggccggatgcggatccactgcctggagaacgtggacaaa
gctctgcagttcctgaaggagcagcgggttcacttggagaacatgggctcccatgacatc
gtggacgggaaccaccgactgactctgggactcatctggaccatcatcctccgcttccag
attcaggacatcagtgtggagacggaggacaacaaggagaagaagtcggctaaagatgct
ctgctgctctggtgtcagatgaagacagctggatactcaaacgtaaacatccataacttc
accaccagctggagagacgggatggccttcaacgcgctcattcacaaacacagacctgac
ctgattgactttgataaactgaagaagtccaacgctcactacaacctgcagaatgcgttt
aacctggcagagcaacacctgggcctgaccaagctgctggacccagaagatatcagcgtg
gaccagcctgatgagaagtctgtcatcacctacgtggtcacctactatcactacttctcc
aagatgaaggctctgaaggtggaggggaaacgcatcgggaaggttctggaccacgccatc
gagacagagaggatgattgagaagtacgagtctctggcctcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagtttgccaactctctggtgggggtccag
cagcagctgcaggccttcaacacctaccggactgtggagaagcctccaaagtttacggag
aaggggaacctggaggtcctgctcttcaccatccagagcaagatgagagccaacaaccag
aaggtctacatgcctcgtgaaggaaaactcatctctgacatcaacaaggcgtgggagcgg
ctggagaaggcggagcacgagagggagctggccctgaggaccgagctgatccgtcaggag
aagctggagcagctggccaggcgcttcgacaggaaggcggccatgagggagacctggctg
agcgagaaccagaggctggtgtctcaggacaactttggttttgacctccaagccgtggag
gcggccaccaagaagcacgaggccatcgagacggacatcgccgcgtacaaggagcgcgtc
caggccgtggttgccgtggccaaggagctggaggcggagygttaccacgacatcaaacgc
atcgcagccaggaaggacaacgtgacgcggctgtgggagtacctgctggagctgctgaag
gcccgcagacagaggctggagatgaacctgggtctgcagagggttttccaggagatgctc
cacatcatggactggatggacgagatgaagatgttgctgctgtctcaggactatggcaaa
catctgctgggggtggaagacctgctgcagaaacacgccttggtggaggccgacatctcc
atccaggccgaccgggtgaaggccgtggtcaccaacgccaacagacactctgtgtgcgac
agcgggtacaagccctgtgaccctcagatcatccaggaccgggtggcccacctggagttc
tgctaccaggagctgagccagctggccgcggagcgtcgtgcccacctggaggagtctcgt
cgcctctggaagttcttgtgggagctggcggaggaggagggctggatccgtgagaaagag
cagatcctgtcctccctggagctaggtaaagacctgacgggggctgtgcgcctgctgagc
cagcagcgcgccctggaagatgagatgagcggacgcgctgggcacctgcagcacaccata
gccgagggccagaccatggtccaggtgggtcacttcggtgccgccaggatccaggagcgc
gtcgcggacctccaggctcagtgggccgccctcgagcagctggtcgcctcgaggaagagg
agactggaggaagctctggctctgcaccagttccaggcggacgcggacgacgtggacgcc
tggactctggacgctctgcgcatcgtctccagtggagagaccggccacgacgagttctcc
acccaagctctggtccggaagcacaaggacgccgcagcagaggtggccagctaccgctca
gttatcgactccctacacgagcaggtggcggcgctgccccgggacgaggcggagtcagag
gaggtgcgcggccggctggctggcatcgaggagcgctacagggaggtgtctgagctgacc
aagctgaggaagcaggcgctgcaggacacgctggcgctctacaagatgttcagcgaggtg
gacgcctgccaggtctggatcgacgagaaggagcagtggctcaacggcatggagatcccc
gagaaactggaggacctggaggtcatacagcacaggttcgagagtctggaaccagagatg
aacagccaggcgtctcgtgtagctgtggtgaaccagatcgcccgacagctggtccacagt
ggacacccgagtcacaaggacatcaagactcagcaggacaagctcaacaacaggtggagt
cagttccgggaccttgtggaccaaaagaaagagtccctgaactcagctctgggtgtgcag
aactaccacctggactgcaacgagaccaagtcctggatcagagagaaaaccaaagtcatc
gagtccacccaagagctgggcaacgacctgaccggagtcatggccctgcagcggaaactg
accggcatggagcgggacctgctcgccatccaggacaagctgggggacctgcagaccgag
gcccagcagctttctgaggagcacccagaccaggccaaggccatcactggacggctggcc
gagatcaccgccgtctggaacgagatgaagaacactctgaagacccgggaggagtctctg
ggcgaagcccgcaaactgcagcagtttctacgggagctggacgacttccaggcctggctg
tcccgcactcagaccgccatcgcctctgaggacatgcccaacacgctggccgaggccgag
aagctgatggcccagcaccaaagcatcaagaacgaggtccagaactacgaagaggactac
cagaagatgcgggacatgggcgagatggtgacgcagggtcagaccgatgctcagcacatg
ttcctgcaccagaggctgcaggcgctccacaccggctggaacgagctgcacaggatgtgg
gagaaccggcagaacctgctgtcccagtcycatgcctaccagctgttcctgagggacacc
aggcaggccgaggccttcctcaacaaccaggagtatatcctggctcacacggagttgccc
accactctggagggtgctgaggctgccatcaagaagcaggaggactttatgaccaccatg
gacgccagcgaggataagatcaacgccgtgattgaagcgggccggaggctggcggctgac
gggaacatcaacgccgatcgtatccaggaacgagtgtcctccatcgatgacaggcataag
aagaacagggaggctgctgtggagctgctgatgagactgaaggacaatcgagacctgcag
aagttcctccaggactgtcaagagctgtctctgtggatcagtgagaagatgctgacagcg
caggacatgacctatgatgaggctaggaacctgcacagcaagtggctgaaacaccaggcc
ttcatggctgaactgcagtccaacaaggagtggctggacaaaatccagaaggacgggatg
ctgctggtgtcagagaagcccgagacagaggcggtggtgaaggagaagctctcgttgctc
catggcacgtgggacaagctggaatccaccactcagaccaaagcccaatgtctgttcgac
gccaacaaggctgagctgttcacgcagagctgcaccgacctggacaagtggctgggcagc
ctggagggccagatccagtctgatgactacggcaaagacctgacgtccgtcaacatcctg
ctraagaagcagcagatgttggagaaccaggtggaggtgcgtcagagggaggtggtggag
ctgcagagccaagtgaaggcccttggtcaggaggtgaaagacactgacgaggtggacggg
cgtagacaggtggtggagaagaagttccaggagctgctggaaccgctgcggcagcgcaga
aatttcctagtggcatccagagaaattcatcagttcaaccgtgacatcgaggacgaaatc
ctctgggcccatgagaggatgcctgtggccacatccactgactatggacacaacctgcag
acagttcagctgctcatcaagaagaaccagacggtagagaaggaaatccagggtcatcag
cctcgtatcactgacatcctggagcgcagtcagagtctgctgcaggatcagtcctccaac
actaatgtgatccgccagcgtctctccgacctgcagcagctttggaagcagttgatggaa
gaagtggagcggcggcacaaacggcttcaggaggcccacaaagcccagcagtattacttt
gatgccgccgaggcagaggcctggatgagtgaacaggagctctacatgatgtcagaggag
aaggccaaggacgggcagagcgctgtcaacatgctgaaaaaacatcagatcatggagcag
gcggttgaggactacgccgagactgtccatcagctgtctaagaccagcagaggactcgtg
gctgatggacacccagagagtgagcgaatcagtatgcggcagtccaaggttgacaagcta
tacgctggcctgaaggacctgtctgaggagaggcgtggcaaactagatgagaggctccac
ctcttccagctcaatcgagaggtggatgacctagaacagtggattgctgagcgagaggtg
gtggccgggtcacacgagctgggccaggattacgaacacgtcactatgctgcaggagcgt
ttccgggagtttgcacgggacactggaaacattggacaggagcgtgtagacgctgttaac
cggctggcagatgagctgatcaatgccgggcatggtgatgcagccacagtagctgagtgg
aaagacggactgaatgaggcctgggcagacctgctggagcttatcgacaccagaactcaa
atccttgctgcctcctttgagctccacaagttctaccacgatgccaaggagatcttagga
cgcatcgcagacaagcagaaaaagctgccagaagaggtgggccgagaccaaaacacggtg
gagactctgcagaggatgcacaccacctttgaacacgacatccaggcactgggaacgcag
gtgaggcagctgcaggaggatgcggtgcgcctgcagtcagcgtacgccggggacaaggca
gatgatattcagcgcagggaaagcgaagttctggaggcctggaggagtctgctggaggcc
tgtgaaggacgcagggtccgtctcctggacaccggggacaagttccgcttcttcagcatg
gtccgggacctcatgctgtggatggaggacgtgatccggcttattgaggcccaggaaaaa
cccagagatgtgtcttctgtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgacgcccgtaacgacagcttcaccacctgcatcgagctggggaaagctctgctggcc
agaaaacactacgcttcaccggagatcaaggagaagctgctgcagctgacggacaaaagg
aaggagatgattgataagtgggaggaccgatgggagtggctccgcctcatcctggaggtg
caccagttctcgcgggacgcgggtgtggccgaggcatggctgctgggccaggagccgtac
ctgtccagcagagaggtgggccagagcgtggacgaggtggagaagctcatcaaacgccac
gaagccttcgagaagtccgccgccacctgggaggagcgcttctctgccctggagaggctg
accacgctggagctgctggaggtcaggaggcagcaggaggaggaggagaggaggaggaaa
ccaacacctgcagaaccagctgtggtccagcaggaagaagctcagcagcagcagagcgtc
gtcactcagaacggcctcccatcggaccagaactctcctcaggatgcaggggacgatctg
gctaacgggattgctgagcacagctcaaaggaaacaagccccgccccctcgccgacgtcc
ggcaggaagactaaaagccagtcggccacactgcccaccaagaaccaggacctgacctgg
cagcccgaaggcttcctgcaccgtaaacacgagtgggaggggcacaacaagaaggcctcc
aacaggtcgtggcacaacgtgtactgcgtcatcaaaaacaaggaagtgagcttctacaag
gacagcaaggcagctggacagggcgtggcttaccacggcgagccatctgtcagcctgaag
aatgccacctgtgacgtggcctctgagtacaagaagaagaaacacgtcttcaaactcaga
gccccaaatggaaacgagtatctgttccaagccaaagatgaagaggagatgagcacctgg
atccaggccatcctgaacgccgctgacctctcccacacggagggcagcaaccccggcaca
ccggcctcagtgcgcgctcagaccatgcccgccatcgtctcggtcggcgccgagtccagt
cccggcaagaaggacaaggagaaacgcttcagcttgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
