Austrofundulus limnaeus (annual killifish): 106529272
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Entry
106529272 CDS
T06063
Symbol
sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106529272 (sox1)
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106529272 (sox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106529272
NCBI-ProteinID:
XP_013880087
UniProt:
A0A2I4CJB7
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPANPGGHAGGGGKIPQERIKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLGSPAGVGMGGGQRLDSPGGGHHAGANAGYAAHMNGWANGSYSGQVAAAAHA
MMHEAQLAYTHHHPHHHHHHHPHHNPQPVHRYDMSSLSYSPISNSQSYMSASPPGYISGY
SHQSSGLSPGSLVKSEPSVSPPVSAARAPPSCPAGDLRDMISMYLPTGEAAAGDSSVPSR
LHVLHPQHYQSGSAPVNGTVPLTHI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttacattcccccgtggtgccccagaccaaccca
gccaacccggggggacacgcgggaggaggaggcaaaatcccgcaggagaggatcaaaaga
cccatgaacgcattcatggtctggtccaggggccagcggaggaaaatggcccaggagaac
cccaagatgcacaactcggagatcagcaagcggctgggagcggagtggaaggtgatgacc
gaggcggagaagagacccttcatcgacgaggcgaagcggctccgggccatgcacatgaag
gagcacccggactacaagtaccggccccggaggaagaccaagactctgctcaagaaggac
aagtactccctggcaggcgggctcctgggctccccggcgggcgtggggatgggcggcggg
cagcggctggacagtcccggaggcgggcaccacgcgggggcgaacgcgggctacgcggcg
cacatgaacggctgggcgaacggctcgtactcgggccaggtggccgccgcggcgcacgcc
atgatgcacgaggcgcagctggcgtacacgcaccaccacccgcaccaccaccaccaccac
cacccgcaccacaacccgcagcccgtgcacaggtacgacatgagctccctgtcctacagc
cccatctcaaactctcagagctacatgagcgcctctccgccgggctacatcagcggctac
agccaccagagctccggcctctccccgggttctctggtcaagtcggagccgagcgtcagc
ccgccggtgtccgcggcgcgcgcaccgccctcgtgccccgcgggggacctgcgggacatg
atcagcatgtacctgccgaccggagaggcggcagcgggggactcgtcggtcccgagcaga
ctgcacgtcctgcacccgcagcactaccagagcgggtccgcgccggtgaacgggacggtt
cccctcacgcatatttaa
DBGET
integrated database retrieval system
